RNA–Protein interactions for RNA: ENST00000609967.5

EBF4-211, Transcript of early B cell factor 4, humanhuman

TSL 5

Gene EBF4, Length 2,861 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF4-211ENST00000609967 NISCHQ9Y2I1 1504 aa37.91■■■■□ 3.66
EBF4-211ENST00000609967 CCDC180Q9P1Z9 1646 aa33.09■■■□□ 2.89
EBF4-211ENST00000609967 ZCCHC6Q5VYS8 1495 aaKnown RBP31.83■■■□□ 2.69
EBF4-211ENST00000609967 DCAF1Q9Y4B6 1507 aa31.36■■■□□ 2.61
EBF4-211ENST00000609967 ABCC9O60706 1549 aa31.35■■■□□ 2.61
EBF4-211ENST00000609967 DCAF8L2P0C7V8 631 aa31.25■■■□□ 2.59
EBF4-211ENST00000609967 MYO15BQ96JP2 1530 aa31.03■■■□□ 2.56
EBF4-211ENST00000609967 NACADO15069 1562 aa30.84■■■□□ 2.53
EBF4-211ENST00000609967 SHROOM4Q9ULL8 1493 aa30.79■■■□□ 2.52
EBF4-211ENST00000609967 SUPT5HO00267 1087 aaKnown RBP30.6■■■□□ 2.49
EBF4-211ENST00000609967 RB1CC1Q8TDY2 1594 aa30.58■■■□□ 2.49
EBF4-211ENST00000609967 HRCP23327 699 aa30.55■■■□□ 2.48
EBF4-211ENST00000609967 PPARGC1BQ86YN6 1023 aaKnown RBP30.4■■■□□ 2.46
EBF4-211ENST00000609967 SCRIBQ14160 1630 aa30.39■■■□□ 2.46
EBF4-211ENST00000609967 PCGF6Q9BYE7 350 aa30.31■■■□□ 2.44
EBF4-211ENST00000609967 UNC13AQ9UPW8 1703 aa30.03■■■□□ 2.4
EBF4-211ENST00000609967 CHIC1Q5VXU3 224 aa29.73■■■□□ 2.35
EBF4-211ENST00000609967 BICRAQ9NZM4 1560 aa29.72■■■□□ 2.35
EBF4-211ENST00000609967 PABPN1Q86U42 306 aaKnown RBP eCLIP29.55■■■□□ 2.32
EBF4-211ENST00000609967 CECR2Q9BXF3 1484 aa29.47■■■□□ 2.31
EBF4-211ENST00000609967 LOC105371045A0A1W2PR82 267 aa29.38■■■□□ 2.29
EBF4-211ENST00000609967 RSF1Q96T23 1441 aaPredicted RBP29.37■■■□□ 2.29
EBF4-211ENST00000609967 MROH2BQ7Z745 1585 aa29.29■■■□□ 2.28
EBF4-211ENST00000609967 BAZ1AQ9NRL2 1556 aaPredicted RBP29.25■■■□□ 2.27
EBF4-211ENST00000609967 SMARCA4P51532 1647 aa29.15■■■□□ 2.26
EBF4-211ENST00000609967 PELP1Q8IZL8 1130 aaKnown RBP29.09■■■□□ 2.25
EBF4-211ENST00000609967 SCAF1Q9H7N4 1312 aaKnown RBP29.07■■■□□ 2.24
EBF4-211ENST00000609967 WIZO95785 1651 aa29.04■■■□□ 2.24
EBF4-211ENST00000609967 TRIM26Q12899 539 aaPredicted RBP28.95■■■□□ 2.23
EBF4-211ENST00000609967 PEG3Q9GZU2 1588 aa28.83■■■□□ 2.21
EBF4-211ENST00000609967 EIF4G1Q04637 1599 aaKnown RBP28.8■■■□□ 2.2
EBF4-211ENST00000609967 TOP2AP11388 1531 aaKnown RBP28.72■■■□□ 2.19
EBF4-211ENST00000609967 ATAD2BQ9ULI0 1458 aa28.7■■■□□ 2.19
EBF4-211ENST00000609967 SMARCA2P51531 1590 aa28.66■■■□□ 2.18
EBF4-211ENST00000609967 EHMT2Q96KQ7 1210 aa28.64■■■□□ 2.18
EBF4-211ENST00000609967 ZEB1P37275 1124 aaPredicted RBP28.5■■■□□ 2.15
EBF4-211ENST00000609967 BAZ1BQ9UIG0 1483 aaKnown RBP28.5■■■□□ 2.15
EBF4-211ENST00000609967 NCAPD3P42695 1498 aa28.49■■■□□ 2.15
EBF4-211ENST00000609967 CCDC88BA6NC98 1476 aa28.44■■■□□ 2.14
EBF4-211ENST00000609967 FAM9AQ8IZU1 332 aaPredicted RBP28.44■■■□□ 2.14
EBF4-211ENST00000609967 HMGXB3Q12766 1538 aa28.42■■■□□ 2.14
EBF4-211ENST00000609967 CC2D2AQ9P2K1 1620 aa28.4■■■□□ 2.14
EBF4-211ENST00000609967 NEUROD1Q13562 356 aa28.33■■■□□ 2.13
EBF4-211ENST00000609967 ACIN1Q9UKV3 1341 aaKnown RBP28.22■■■□□ 2.11
EBF4-211ENST00000609967 GTF3C3Q9Y5Q9 886 aa28.2■■■□□ 2.1
EBF4-211ENST00000609967 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.12■■■□□ 2.09
EBF4-211ENST00000609967 TRIM41Q8WV44 630 aa28.05■■■□□ 2.08
EBF4-211ENST00000609967 CCER1Q8TC90 406 aaPredicted RBP27.95■■■□□ 2.07
EBF4-211ENST00000609967 TTBK1Q5TCY1 1321 aaPredicted RBP27.89■■■□□ 2.06
EBF4-211ENST00000609967 DIEXFQ68CQ4 756 aaKnown RBP27.87■■■□□ 2.05
EBF4-211ENST00000609967 CENPBP07199 599 aaPredicted RBP27.83■■■□□ 2.05
EBF4-211ENST00000609967 CFTRP13569 1480 aa27.82■■■□□ 2.04
EBF4-211ENST00000609967 YTHDC1Q96MU7 727 aaKnown RBP27.8■■■□□ 2.04
EBF4-211ENST00000609967 DNAJC5BQ9UF47 199 aa27.8■■■□□ 2.04
EBF4-211ENST00000609967 ABCC8Q09428 1581 aa27.79■■■□□ 2.04
EBF4-211ENST00000609967 MYT1Q01538 1121 aa27.78■■■□□ 2.04
EBF4-211ENST00000609967 CADPSQ9ULU8 1353 aa27.73■■■□□ 2.03
EBF4-211ENST00000609967 PRDM2Q13029 1718 aa27.67■■■□□ 2.02
EBF4-211ENST00000609967 WRNQ14191 1432 aaPredicted RBP eCLIP27.62■■■□□ 2.01
EBF4-211ENST00000609967 SYNJ1O43426 1573 aa27.53■■■□□ 2
EBF4-211ENST00000609967 NESP48681 1621 aa27.52■■■□□ 2
EBF4-211ENST00000609967 LAMC3Q9Y6N6 1575 aa27.51■■□□□ 1.99
EBF4-211ENST00000609967 TOP2BQ02880 1626 aa27.43■■□□□ 1.98
EBF4-211ENST00000609967 FANCD2Q9BXW9 1451 aa27.41■■□□□ 1.98
EBF4-211ENST00000609967 BIVM-ERCC5R4GMW8 1640 aa27.41■■□□□ 1.98
EBF4-211ENST00000609967 CUX1P39880 1505 aa27.39■■□□□ 1.98
EBF4-211ENST00000609967 PDS5BQ9NTI5 1447 aa27.28■■□□□ 1.96
EBF4-211ENST00000609967 SOGA1O94964 1423 aa27.26■■□□□ 1.96
EBF4-211ENST00000609967 MIER1Q8N108 512 aa27.23■■□□□ 1.95
EBF4-211ENST00000609967 CEP164Q9UPV0 1460 aa27.23■■□□□ 1.95
EBF4-211ENST00000609967 ZNF316A6NFI3 1004 aaPredicted RBP27.21■■□□□ 1.95
EBF4-211ENST00000609967 KIF21AQ7Z4S6 1674 aa27.19■■□□□ 1.94
EBF4-211ENST00000609967 RUSC2Q8N2Y8 1516 aa27.18■■□□□ 1.94
EBF4-211ENST00000609967 EEA1Q15075 1411 aa27.16■■□□□ 1.94
EBF4-211ENST00000609967 DNMBPQ6XZF7 1577 aa27.15■■□□□ 1.94
EBF4-211ENST00000609967 TOPBP1Q92547 1522 aa27.11■■□□□ 1.93
EBF4-211ENST00000609967 URB2Q14146 1524 aaKnown RBP27.1■■□□□ 1.93
EBF4-211ENST00000609967 FGD5Q6ZNL6 1462 aa27.08■■□□□ 1.93
EBF4-211ENST00000609967 CSRNP3Q8WYN3 585 aa27.03■■□□□ 1.92
EBF4-211ENST00000609967 POLA1P09884 1462 aaPredicted RBP26.98■■□□□ 1.91
EBF4-211ENST00000609967 MRC2Q9UBG0 1479 aa26.94■■□□□ 1.9
EBF4-211ENST00000609967 HNRNPUL2Q1KMD3 747 aaKnown RBP26.93■■□□□ 1.9
EBF4-211ENST00000609967 KIF27Q86VH2 1401 aa26.91■■□□□ 1.9
EBF4-211ENST00000609967 RAD54L2Q9Y4B4 1467 aa26.89■■□□□ 1.89
EBF4-211ENST00000609967 CUX2O14529 1486 aa26.87■■□□□ 1.89
EBF4-211ENST00000609967 ABCA10Q8WWZ4 1543 aa26.86■■□□□ 1.89
EBF4-211ENST00000609967 ERCC6Q03468 1493 aa26.85■■□□□ 1.89
EBF4-211ENST00000609967 KIF21BO75037 1637 aa26.83■■□□□ 1.89
EBF4-211ENST00000609967 WDR62O43379 1518 aa26.83■■□□□ 1.88
EBF4-211ENST00000609967 WDR97A6NE52 1622 aa26.8■■□□□ 1.88
EBF4-211ENST00000609967 THOC2Q8NI27 1593 aaKnown RBP26.77■■□□□ 1.88
EBF4-211ENST00000609967 GOLGA3Q08378 1498 aa26.77■■□□□ 1.88
EBF4-211ENST00000609967 PRXQ9BXM0 1461 aa26.76■■□□□ 1.87
EBF4-211ENST00000609967 TARBP1Q13395 1621 aaKnown RBP26.74■■□□□ 1.87
EBF4-211ENST00000609967 IGF1RP08069 1367 aa26.74■■□□□ 1.87
EBF4-211ENST00000609967 UBTFP17480 764 aaKnown RBP26.73■■□□□ 1.87
EBF4-211ENST00000609967 RAPGEF2Q9Y4G8 1499 aa26.71■■□□□ 1.87
EBF4-211ENST00000609967 SUPT16HQ9Y5B9 1047 aaKnown RBP26.71■■□□□ 1.87
EBF4-211ENST00000609967 TNIKQ9UKE5 1360 aa26.7■■□□□ 1.86
EBF4-211ENST00000609967 CEP162Q5TB80 1403 aa26.68■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 253 ms