RNA–Protein interactions for RNA: ENST00000609249.5

AC004448.4-207, humanhuman

TSL 5

Gene AC004448.4, Length 970 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004448.4-207ENST00000609249 AEBP2Q6ZN18 517 aaPredicted RBP19.26■□□□□ 0.67
AC004448.4-207ENST00000609249 CHIC1Q5VXU3 224 aa18.79■□□□□ 0.6
AC004448.4-207ENST00000609249 NISCHQ9Y2I1 1504 aa17.39■□□□□ 0.37
AC004448.4-207ENST00000609249 PHF23Q9BUL5 403 aaPredicted RBP16.58■□□□□ 0.24
AC004448.4-207ENST00000609249 SENP3Q9H4L4 574 aaPredicted RBP16.26■□□□□ 0.19
AC004448.4-207ENST00000609249 ABCC9O60706 1549 aa16.07■□□□□ 0.16
AC004448.4-207ENST00000609249 CCDC180Q9P1Z9 1646 aa15.56■□□□□ 0.08
AC004448.4-207ENST00000609249 DNAJC5BQ9UF47 199 aa15.55■□□□□ 0.08
AC004448.4-207ENST00000609249 PLPPR3Q6T4P5 718 aa15.24■□□□□ 0.03
AC004448.4-207ENST00000609249 FOXD1Q16676 465 aa15.14■□□□□ 0.01
AC004448.4-207ENST00000609249 RB1CC1Q8TDY2 1594 aa14.99□□□□□ -0.01
AC004448.4-207ENST00000609249 PABPN1Q86U42 306 aaKnown RBP eCLIP14.9□□□□□ -0.02
AC004448.4-207ENST00000609249 UNC13AQ9UPW8 1703 aa14.86□□□□□ -0.03
AC004448.4-207ENST00000609249 NACADO15069 1562 aa14.77□□□□□ -0.05
AC004448.4-207ENST00000609249 BICRAQ9NZM4 1560 aa14.73□□□□□ -0.05
AC004448.4-207ENST00000609249 DCAF8L2P0C7V8 631 aa14.65□□□□□ -0.06
AC004448.4-207ENST00000609249 PPP6R1Q9UPN7 881 aa14.63□□□□□ -0.07
AC004448.4-207ENST00000609249 ADRA2BP18089 450 aa14.6□□□□□ -0.07
AC004448.4-207ENST00000609249 ZCCHC6Q5VYS8 1495 aaKnown RBP14.5□□□□□ -0.09
AC004448.4-207ENST00000609249 CC2D2AQ9P2K1 1620 aa14.49□□□□□ -0.09
AC004448.4-207ENST00000609249 CECR2Q9BXF3 1484 aa14.46□□□□□ -0.09
AC004448.4-207ENST00000609249 DNAJC5Q9H3Z4 198 aa14.43□□□□□ -0.1
AC004448.4-207ENST00000609249 MYO15BQ96JP2 1530 aa14.4□□□□□ -0.1
AC004448.4-207ENST00000609249 DCAF1Q9Y4B6 1507 aa14.36□□□□□ -0.11
AC004448.4-207ENST00000609249 EIF4G1Q04637 1599 aaKnown RBP14.33□□□□□ -0.12
AC004448.4-207ENST00000609249 PIAS4Q8N2W9 510 aaPredicted RBP14.27□□□□□ -0.13
AC004448.4-207ENST00000609249 SCRIBQ14160 1630 aa14.26□□□□□ -0.13
AC004448.4-207ENST00000609249 SHROOM4Q9ULL8 1493 aa14.24□□□□□ -0.13
AC004448.4-207ENST00000609249 CUX2O14529 1486 aa13.91□□□□□ -0.18
AC004448.4-207ENST00000609249 MSH5O43196 834 aa13.88□□□□□ -0.19
AC004448.4-207ENST00000609249 ERCC6Q03468 1493 aa13.8□□□□□ -0.2
AC004448.4-207ENST00000609249 NESP48681 1621 aa13.74□□□□□ -0.21
AC004448.4-207ENST00000609249 TRIM41Q8WV44 630 aa13.67□□□□□ -0.22
AC004448.4-207ENST00000609249 NCAPD3P42695 1498 aa13.66□□□□□ -0.22
AC004448.4-207ENST00000609249 THOC2Q8NI27 1593 aaKnown RBP13.66□□□□□ -0.22
AC004448.4-207ENST00000609249 ATAD2BQ9ULI0 1458 aa13.61□□□□□ -0.23
AC004448.4-207ENST00000609249 SMARCA2P51531 1590 aa13.54□□□□□ -0.24
AC004448.4-207ENST00000609249 KIF21AQ7Z4S6 1674 aa13.54□□□□□ -0.24
AC004448.4-207ENST00000609249 HMGXB3Q12766 1538 aa13.53□□□□□ -0.24
AC004448.4-207ENST00000609249 SMARCA4P51532 1647 aa13.51□□□□□ -0.25
AC004448.4-207ENST00000609249 BAZ1AQ9NRL2 1556 aaPredicted RBP13.48□□□□□ -0.25
AC004448.4-207ENST00000609249 PPP4R3CPQ6ZMV5 832 aa13.47□□□□□ -0.25
AC004448.4-207ENST00000609249 LAMC3Q9Y6N6 1575 aa13.42□□□□□ -0.26
AC004448.4-207ENST00000609249 BAZ1BQ9UIG0 1483 aaKnown RBP13.42□□□□□ -0.26
AC004448.4-207ENST00000609249 MROH2BQ7Z745 1585 aa13.41□□□□□ -0.26
AC004448.4-207ENST00000609249 PEG3Q9GZU2 1588 aa13.33□□□□□ -0.28
AC004448.4-207ENST00000609249 PDS5BQ9NTI5 1447 aa13.3□□□□□ -0.28
AC004448.4-207ENST00000609249 WDR62O43379 1518 aa13.3□□□□□ -0.28
AC004448.4-207ENST00000609249 MRC2Q9UBG0 1479 aa13.29□□□□□ -0.28
AC004448.4-207ENST00000609249 RSF1Q96T23 1441 aaPredicted RBP13.28□□□□□ -0.28
AC004448.4-207ENST00000609249 WIZO95785 1651 aa13.27□□□□□ -0.29
AC004448.4-207ENST00000609249 SCAF1Q9H7N4 1312 aaKnown RBP13.26□□□□□ -0.29
AC004448.4-207ENST00000609249 MAPK8IP2Q13387 824 aaPredicted RBP13.25□□□□□ -0.29
AC004448.4-207ENST00000609249 KCNA4P22459 653 aa13.23□□□□□ -0.29
AC004448.4-207ENST00000609249 CADPSQ9ULU8 1353 aa13.21□□□□□ -0.29
AC004448.4-207ENST00000609249 RIMBP3CA6NJZ7 1639 aa13.21□□□□□ -0.3
AC004448.4-207ENST00000609249 RIMBP3BA6NNM3 1639 aa13.21□□□□□ -0.3
AC004448.4-207ENST00000609249 RIMBP3Q9UFD9 1639 aa13.21□□□□□ -0.3
AC004448.4-207ENST00000609249 OSCARQ8IYS5 282 aa13.17□□□□□ -0.3
AC004448.4-207ENST00000609249 CEP164Q9UPV0 1460 aa13.14□□□□□ -0.31
AC004448.4-207ENST00000609249 TOP2AP11388 1531 aaKnown RBP13.13□□□□□ -0.31
AC004448.4-207ENST00000609249 FANCD2Q9BXW9 1451 aa13.11□□□□□ -0.31
AC004448.4-207ENST00000609249 URB2Q14146 1524 aaKnown RBP13.1□□□□□ -0.31
AC004448.4-207ENST00000609249 ARHGEF11O15085 1522 aa13.08□□□□□ -0.32
AC004448.4-207ENST00000609249 NCBP3Q53F19 620 aaKnown RBP13.07□□□□□ -0.32
AC004448.4-207ENST00000609249 SUPT5HO00267 1087 aaKnown RBP13.06□□□□□ -0.32
AC004448.4-207ENST00000609249 CNKSR2Q8WXI2 1034 aa13.06□□□□□ -0.32
AC004448.4-207ENST00000609249 ZNF608Q9ULD9 1512 aaPredicted RBP13.03□□□□□ -0.32
AC004448.4-207ENST00000609249 CFTRP13569 1480 aa13□□□□□ -0.33
AC004448.4-207ENST00000609249 DMRT2Q9Y5R5 561 aa13□□□□□ -0.33
AC004448.4-207ENST00000609249 CCDC88BA6NC98 1476 aa12.99□□□□□ -0.33
AC004448.4-207ENST00000609249 CYB5RLQ6IPT4 315 aa12.97□□□□□ -0.33
AC004448.4-207ENST00000609249 ARAP1Q96P48 1450 aa12.95□□□□□ -0.34
AC004448.4-207ENST00000609249 NPM3O75607 178 aaKnown RBP12.94□□□□□ -0.34
AC004448.4-207ENST00000609249 CHD1O14646 1710 aa12.93□□□□□ -0.34
AC004448.4-207ENST00000609249 TRHP20396 242 aaPredicted RBP12.93□□□□□ -0.34
AC004448.4-207ENST00000609249 EIF4G3O43432 1585 aaKnown RBP12.9□□□□□ -0.34
AC004448.4-207ENST00000609249 PRDM2Q13029 1718 aa12.89□□□□□ -0.35
AC004448.4-207ENST00000609249 IFT140Q96RY7 1462 aa12.86□□□□□ -0.35
AC004448.4-207ENST00000609249 TOPBP1Q92547 1522 aa12.83□□□□□ -0.35
AC004448.4-207ENST00000609249 AQRO60306 1485 aaKnown RBP eCLIP12.82□□□□□ -0.36
AC004448.4-207ENST00000609249 RNF216Q9NWF9 866 aaPredicted RBP12.8□□□□□ -0.36
AC004448.4-207ENST00000609249 TARBP1Q13395 1621 aaKnown RBP12.8□□□□□ -0.36
AC004448.4-207ENST00000609249 HOXD11P31277 338 aaPredicted RBP12.75□□□□□ -0.37
AC004448.4-207ENST00000609249 FBLN2P98095 1184 aa12.75□□□□□ -0.37
AC004448.4-207ENST00000609249 DNMBPQ6XZF7 1577 aa12.73□□□□□ -0.37
AC004448.4-207ENST00000609249 CLASP1Q7Z460 1538 aa12.72□□□□□ -0.37
AC004448.4-207ENST00000609249 RAD54L2Q9Y4B4 1467 aa12.7□□□□□ -0.38
AC004448.4-207ENST00000609249 POLA1P09884 1462 aaPredicted RBP12.68□□□□□ -0.38
AC004448.4-207ENST00000609249 ABCC8Q09428 1581 aa12.66□□□□□ -0.38
AC004448.4-207ENST00000609249 TDRD9Q8NDG6 1382 aaKnown RBP12.66□□□□□ -0.38
AC004448.4-207ENST00000609249 SNAPC4Q5SXM2 1469 aa12.65□□□□□ -0.38
AC004448.4-207ENST00000609249 POTEDQ86YR6 584 aa12.64□□□□□ -0.39
AC004448.4-207ENST00000609249 ERCC6L2Q5T890 1561 aa12.6□□□□□ -0.39
AC004448.4-207ENST00000609249 CUX1P39880 1505 aa12.58□□□□□ -0.4
AC004448.4-207ENST00000609249 SYNJ1O43426 1573 aa12.58□□□□□ -0.4
AC004448.4-207ENST00000609249 GAPVD1Q14C86 1478 aa12.58□□□□□ -0.4
AC004448.4-207ENST00000609249 SOGA1O94964 1423 aa12.56□□□□□ -0.4
AC004448.4-207ENST00000609249 SLC4A1APQ9BWU0 796 aaKnown RBP12.56□□□□□ -0.4
AC004448.4-207ENST00000609249 FGD5Q6ZNL6 1462 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms