RNA–Protein interactions for RNA: ENST00000608996.5

SUSD4-210, Transcript of sushi domain containing 4, humanhuman

TSL 5

Gene SUSD4, Length 2,566 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUSD4-210ENST00000608996 NISCHQ9Y2I1 1504 aa22.91■■□□□ 1.26
SUSD4-210ENST00000608996 SHROOM4Q9ULL8 1493 aa19.58■□□□□ 0.72
SUSD4-210ENST00000608996 CCDC180Q9P1Z9 1646 aa19.56■□□□□ 0.72
SUSD4-210ENST00000608996 ZCCHC6Q5VYS8 1495 aaKnown RBP19.31■□□□□ 0.68
SUSD4-210ENST00000608996 DCAF8L2P0C7V8 631 aa19.31■□□□□ 0.68
SUSD4-210ENST00000608996 SUPT5HO00267 1087 aaKnown RBP19.31■□□□□ 0.68
SUSD4-210ENST00000608996 MYO15BQ96JP2 1530 aa18.85■□□□□ 0.61
SUSD4-210ENST00000608996 CHIC1Q5VXU3 224 aa18.85■□□□□ 0.61
SUSD4-210ENST00000608996 ABCC9O60706 1549 aa18.78■□□□□ 0.6
SUSD4-210ENST00000608996 DCAF1Q9Y4B6 1507 aa18.71■□□□□ 0.59
SUSD4-210ENST00000608996 HRCP23327 699 aa18.68■□□□□ 0.58
SUSD4-210ENST00000608996 PCGF6Q9BYE7 350 aa18.54■□□□□ 0.56
SUSD4-210ENST00000608996 SCRIBQ14160 1630 aa18.42■□□□□ 0.54
SUSD4-210ENST00000608996 LOC105371045A0A1W2PR82 267 aa18.32■□□□□ 0.52
SUSD4-210ENST00000608996 PPARGC1BQ86YN6 1023 aaKnown RBP18.27■□□□□ 0.52
SUSD4-210ENST00000608996 NACADO15069 1562 aa18.23■□□□□ 0.51
SUSD4-210ENST00000608996 RB1CC1Q8TDY2 1594 aa18.21■□□□□ 0.51
SUSD4-210ENST00000608996 TRIM26Q12899 539 aaPredicted RBP18.11■□□□□ 0.49
SUSD4-210ENST00000608996 RSF1Q96T23 1441 aaPredicted RBP18.05■□□□□ 0.48
SUSD4-210ENST00000608996 TRIM41Q8WV44 630 aa17.95■□□□□ 0.46
SUSD4-210ENST00000608996 CECR2Q9BXF3 1484 aa17.94■□□□□ 0.46
SUSD4-210ENST00000608996 FAM9AQ8IZU1 332 aaPredicted RBP17.84■□□□□ 0.45
SUSD4-210ENST00000608996 MROH2BQ7Z745 1585 aa17.83■□□□□ 0.44
SUSD4-210ENST00000608996 ZEB1P37275 1124 aaPredicted RBP17.82■□□□□ 0.44
SUSD4-210ENST00000608996 UNC13AQ9UPW8 1703 aa17.77■□□□□ 0.43
SUSD4-210ENST00000608996 WIZO95785 1651 aa17.74■□□□□ 0.43
SUSD4-210ENST00000608996 EHMT2Q96KQ7 1210 aa17.71■□□□□ 0.43
SUSD4-210ENST00000608996 PABPN1Q86U42 306 aaKnown RBP eCLIP17.68■□□□□ 0.42
SUSD4-210ENST00000608996 BICRAQ9NZM4 1560 aa17.63■□□□□ 0.41
SUSD4-210ENST00000608996 BAZ1AQ9NRL2 1556 aaPredicted RBP17.62■□□□□ 0.41
SUSD4-210ENST00000608996 SMARCA4P51532 1647 aa17.52■□□□□ 0.39
SUSD4-210ENST00000608996 EIF4G1Q04637 1599 aaKnown RBP17.44■□□□□ 0.38
SUSD4-210ENST00000608996 TOP2AP11388 1531 aaKnown RBP17.41■□□□□ 0.38
SUSD4-210ENST00000608996 SCAF1Q9H7N4 1312 aaKnown RBP17.37■□□□□ 0.37
SUSD4-210ENST00000608996 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.36■□□□□ 0.37
SUSD4-210ENST00000608996 CCDC88BA6NC98 1476 aa17.36■□□□□ 0.37
SUSD4-210ENST00000608996 CCER1Q8TC90 406 aaPredicted RBP17.34■□□□□ 0.37
SUSD4-210ENST00000608996 PELP1Q8IZL8 1130 aaKnown RBP17.32■□□□□ 0.36
SUSD4-210ENST00000608996 SMARCA2P51531 1590 aa17.32■□□□□ 0.36
SUSD4-210ENST00000608996 ABCC8Q09428 1581 aa17.31■□□□□ 0.36
SUSD4-210ENST00000608996 WRNQ14191 1432 aaPredicted RBP eCLIP17.24■□□□□ 0.35
SUSD4-210ENST00000608996 CEP162Q5TB80 1403 aa17.22■□□□□ 0.35
SUSD4-210ENST00000608996 TTBK1Q5TCY1 1321 aaPredicted RBP17.2■□□□□ 0.34
SUSD4-210ENST00000608996 SOGA1O94964 1423 aa17.18■□□□□ 0.34
SUSD4-210ENST00000608996 TNIKQ9UKE5 1360 aa17.15■□□□□ 0.34
SUSD4-210ENST00000608996 ATAD2BQ9ULI0 1458 aa17.14■□□□□ 0.33
SUSD4-210ENST00000608996 DIEXFQ68CQ4 756 aaKnown RBP17.12■□□□□ 0.33
SUSD4-210ENST00000608996 ACIN1Q9UKV3 1341 aaKnown RBP17.12■□□□□ 0.33
SUSD4-210ENST00000608996 BAZ1BQ9UIG0 1483 aaKnown RBP17.12■□□□□ 0.33
SUSD4-210ENST00000608996 PEG3Q9GZU2 1588 aa17.12■□□□□ 0.33
SUSD4-210ENST00000608996 EEA1Q15075 1411 aa17.11■□□□□ 0.33
SUSD4-210ENST00000608996 DNAJC5BQ9UF47 199 aa17.1■□□□□ 0.33
SUSD4-210ENST00000608996 CSRNP3Q8WYN3 585 aa17.09■□□□□ 0.33
SUSD4-210ENST00000608996 UBTFP17480 764 aaKnown RBP17.08■□□□□ 0.33
SUSD4-210ENST00000608996 NEUROD1Q13562 356 aa17.08■□□□□ 0.33
SUSD4-210ENST00000608996 RUSC2Q8N2Y8 1516 aa17.07■□□□□ 0.32
SUSD4-210ENST00000608996 CC2D2AQ9P2K1 1620 aa17.04■□□□□ 0.32
SUSD4-210ENST00000608996 GOLGA3Q08378 1498 aa17.03■□□□□ 0.32
SUSD4-210ENST00000608996 CENPBP07199 599 aaPredicted RBP17.01■□□□□ 0.31
SUSD4-210ENST00000608996 GTF3C3Q9Y5Q9 886 aa16.95■□□□□ 0.3
SUSD4-210ENST00000608996 ZNF316A6NFI3 1004 aaPredicted RBP16.91■□□□□ 0.3
SUSD4-210ENST00000608996 SYNJ1O43426 1573 aa16.91■□□□□ 0.3
SUSD4-210ENST00000608996 CEP164Q9UPV0 1460 aa16.91■□□□□ 0.3
SUSD4-210ENST00000608996 KIF21BO75037 1637 aa16.88■□□□□ 0.29
SUSD4-210ENST00000608996 CLIP1P30622 1438 aa16.85■□□□□ 0.29
SUSD4-210ENST00000608996 HNRNPUL2Q1KMD3 747 aaKnown RBP16.84■□□□□ 0.29
SUSD4-210ENST00000608996 NCAPD3P42695 1498 aa16.81■□□□□ 0.28
SUSD4-210ENST00000608996 VPS8Q8N3P4 1428 aa16.8■□□□□ 0.28
SUSD4-210ENST00000608996 HMGXB3Q12766 1538 aa16.78■□□□□ 0.28
SUSD4-210ENST00000608996 RANGAP1P46060 587 aaPredicted RBP16.77■□□□□ 0.28
SUSD4-210ENST00000608996 APLP2Q06481 763 aa16.76■□□□□ 0.27
SUSD4-210ENST00000608996 YTHDC1Q96MU7 727 aaKnown RBP16.76■□□□□ 0.27
SUSD4-210ENST00000608996 RAPGEF2Q9Y4G8 1499 aa16.75■□□□□ 0.27
SUSD4-210ENST00000608996 MYT1Q01538 1121 aa16.71■□□□□ 0.27
SUSD4-210ENST00000608996 MIER1Q8N108 512 aa16.71■□□□□ 0.27
SUSD4-210ENST00000608996 TOP2BQ02880 1626 aa16.69■□□□□ 0.26
SUSD4-210ENST00000608996 CFTRP13569 1480 aa16.62■□□□□ 0.25
SUSD4-210ENST00000608996 CUX1P39880 1505 aa16.61■□□□□ 0.25
SUSD4-210ENST00000608996 BIVM-ERCC5R4GMW8 1640 aa16.61■□□□□ 0.25
SUSD4-210ENST00000608996 ERICH3Q5RHP9 1530 aa16.57■□□□□ 0.24
SUSD4-210ENST00000608996 CLSPNQ9HAW4 1339 aa16.54■□□□□ 0.24
SUSD4-210ENST00000608996 ARAP1Q96P48 1450 aa16.53■□□□□ 0.24
SUSD4-210ENST00000608996 PRXQ9BXM0 1461 aa16.53■□□□□ 0.24
SUSD4-210ENST00000608996 DHX57Q6P158 1386 aaKnown RBP16.52■□□□□ 0.24
SUSD4-210ENST00000608996 CADPSQ9ULU8 1353 aa16.52■□□□□ 0.23
SUSD4-210ENST00000608996 KIF27Q86VH2 1401 aa16.49■□□□□ 0.23
SUSD4-210ENST00000608996 KANK4Q5T7N3 995 aaPredicted RBP16.48■□□□□ 0.23
SUSD4-210ENST00000608996 PRDM2Q13029 1718 aa16.44■□□□□ 0.22
SUSD4-210ENST00000608996 RRBP1Q9P2E9 1410 aaKnown RBP16.43■□□□□ 0.22
SUSD4-210ENST00000608996 CUX2O14529 1486 aa16.42■□□□□ 0.22
SUSD4-210ENST00000608996 NESP48681 1621 aa16.39■□□□□ 0.21
SUSD4-210ENST00000608996 FGD5Q6ZNL6 1462 aa16.39■□□□□ 0.21
SUSD4-210ENST00000608996 FANCD2Q9BXW9 1451 aa16.38■□□□□ 0.21
SUSD4-210ENST00000608996 CCNB3Q8WWL7 1395 aa16.36■□□□□ 0.21
SUSD4-210ENST00000608996 ARHGAP35Q9NRY4 1499 aa16.35■□□□□ 0.21
SUSD4-210ENST00000608996 LAMC3Q9Y6N6 1575 aa16.35■□□□□ 0.21
SUSD4-210ENST00000608996 ITGAEP38570 1179 aa16.32■□□□□ 0.2
SUSD4-210ENST00000608996 IGF1RP08069 1367 aa16.31■□□□□ 0.2
SUSD4-210ENST00000608996 RAD54L2Q9Y4B4 1467 aa16.28■□□□□ 0.2
SUSD4-210ENST00000608996 SUPT16HQ9Y5B9 1047 aaKnown RBP16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 114.2 ms