RNA–Protein interactions for RNA: ENST00000608214.1

AP003481.1-202, humanhuman

TSL 1 (best) BASIC

Gene AP003481.1, Length 503 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003481.1-202ENST00000608214 AEBP2Q6ZN18 517 aaPredicted RBP21.94■■□□□ 1.1
AP003481.1-202ENST00000608214 CHIC1Q5VXU3 224 aa20.53■□□□□ 0.88
AP003481.1-202ENST00000608214 SENP3Q9H4L4 574 aaPredicted RBP18.82■□□□□ 0.6
AP003481.1-202ENST00000608214 PHF23Q9BUL5 403 aaPredicted RBP18.48■□□□□ 0.55
AP003481.1-202ENST00000608214 FOXD1Q16676 465 aa17.54■□□□□ 0.4
AP003481.1-202ENST00000608214 NISCHQ9Y2I1 1504 aa17.53■□□□□ 0.4
AP003481.1-202ENST00000608214 POTEDQ86YR6 584 aa16.82■□□□□ 0.28
AP003481.1-202ENST00000608214 MSH5O43196 834 aa16.62■□□□□ 0.25
AP003481.1-202ENST00000608214 PIAS4Q8N2W9 510 aaPredicted RBP16.27■□□□□ 0.2
AP003481.1-202ENST00000608214 PLPPR3Q6T4P5 718 aa16.21■□□□□ 0.19
AP003481.1-202ENST00000608214 ABCC9O60706 1549 aa16.19■□□□□ 0.18
AP003481.1-202ENST00000608214 PPP6R1Q9UPN7 881 aa16.09■□□□□ 0.17
AP003481.1-202ENST00000608214 ADRA2BP18089 450 aa15.98■□□□□ 0.15
AP003481.1-202ENST00000608214 CCDC180Q9P1Z9 1646 aa15.89■□□□□ 0.13
AP003481.1-202ENST00000608214 DNAJC5BQ9UF47 199 aa15.56■□□□□ 0.08
AP003481.1-202ENST00000608214 RB1CC1Q8TDY2 1594 aa15.27■□□□□ 0.03
AP003481.1-202ENST00000608214 NACADO15069 1562 aa15.09■□□□□ 0.01
AP003481.1-202ENST00000608214 PABPN1Q86U42 306 aaKnown RBP eCLIP15.01□□□□□ -0.01
AP003481.1-202ENST00000608214 UNC13AQ9UPW8 1703 aa14.97□□□□□ -0.01
AP003481.1-202ENST00000608214 BICRAQ9NZM4 1560 aa14.89□□□□□ -0.03
AP003481.1-202ENST00000608214 DMRT2Q9Y5R5 561 aa14.87□□□□□ -0.03
AP003481.1-202ENST00000608214 DCAF8L2P0C7V8 631 aa14.85□□□□□ -0.03
AP003481.1-202ENST00000608214 MYO15BQ96JP2 1530 aa14.79□□□□□ -0.04
AP003481.1-202ENST00000608214 MAPK8IP2Q13387 824 aaPredicted RBP14.78□□□□□ -0.04
AP003481.1-202ENST00000608214 SCAF1Q9H7N4 1312 aaKnown RBP14.7□□□□□ -0.06
AP003481.1-202ENST00000608214 CC2D2AQ9P2K1 1620 aa14.64□□□□□ -0.07
AP003481.1-202ENST00000608214 CECR2Q9BXF3 1484 aa14.63□□□□□ -0.07
AP003481.1-202ENST00000608214 SHROOM4Q9ULL8 1493 aa14.62□□□□□ -0.07
AP003481.1-202ENST00000608214 DNAJC5Q9H3Z4 198 aa14.61□□□□□ -0.07
AP003481.1-202ENST00000608214 EIF4G1Q04637 1599 aaKnown RBP14.52□□□□□ -0.08
AP003481.1-202ENST00000608214 DCAF1Q9Y4B6 1507 aa14.47□□□□□ -0.09
AP003481.1-202ENST00000608214 ZCCHC6Q5VYS8 1495 aaKnown RBP14.46□□□□□ -0.09
AP003481.1-202ENST00000608214 SCRIBQ14160 1630 aa14.42□□□□□ -0.1
AP003481.1-202ENST00000608214 CACNB1Q02641 598 aaPredicted RBP14.41□□□□□ -0.1
AP003481.1-202ENST00000608214 HOXD11P31277 338 aaPredicted RBP14.2□□□□□ -0.14
AP003481.1-202ENST00000608214 RNF39Q9H2S5 420 aa14.14□□□□□ -0.15
AP003481.1-202ENST00000608214 PPP4R3CPQ6ZMV5 832 aa14.12□□□□□ -0.15
AP003481.1-202ENST00000608214 DCAF8L1A6NGE4 600 aa14.11□□□□□ -0.15
AP003481.1-202ENST00000608214 CUX2O14529 1486 aa14.11□□□□□ -0.15
AP003481.1-202ENST00000608214 CNKSR2Q8WXI2 1034 aa13.98□□□□□ -0.17
AP003481.1-202ENST00000608214 RNF216Q9NWF9 866 aaPredicted RBP13.98□□□□□ -0.17
AP003481.1-202ENST00000608214 ERCC6Q03468 1493 aa13.97□□□□□ -0.17
AP003481.1-202ENST00000608214 NCAPD3P42695 1498 aa13.95□□□□□ -0.18
AP003481.1-202ENST00000608214 C1QBPQ07021 282 aaKnown RBP13.93□□□□□ -0.18
AP003481.1-202ENST00000608214 ATAD2BQ9ULI0 1458 aa13.86□□□□□ -0.19
AP003481.1-202ENST00000608214 NESP48681 1621 aa13.83□□□□□ -0.2
AP003481.1-202ENST00000608214 HMGXB3Q12766 1538 aa13.8□□□□□ -0.2
AP003481.1-202ENST00000608214 THOC2Q8NI27 1593 aaKnown RBP13.79□□□□□ -0.2
AP003481.1-202ENST00000608214 SMARCA2P51531 1590 aa13.77□□□□□ -0.21
AP003481.1-202ENST00000608214 SMARCA4P51532 1647 aa13.75□□□□□ -0.21
AP003481.1-202ENST00000608214 LAMC3Q9Y6N6 1575 aa13.67□□□□□ -0.22
AP003481.1-202ENST00000608214 TRIM41Q8WV44 630 aa13.67□□□□□ -0.22
AP003481.1-202ENST00000608214 BAZ1BQ9UIG0 1483 aaKnown RBP13.67□□□□□ -0.22
AP003481.1-202ENST00000608214 KIF21AQ7Z4S6 1674 aa13.65□□□□□ -0.22
AP003481.1-202ENST00000608214 PEG3Q9GZU2 1588 aa13.64□□□□□ -0.23
AP003481.1-202ENST00000608214 BAZ1AQ9NRL2 1556 aaPredicted RBP13.61□□□□□ -0.23
AP003481.1-202ENST00000608214 PDS5BQ9NTI5 1447 aa13.58□□□□□ -0.24
AP003481.1-202ENST00000608214 MROH2BQ7Z745 1585 aa13.5□□□□□ -0.25
AP003481.1-202ENST00000608214 WDR62O43379 1518 aa13.5□□□□□ -0.25
AP003481.1-202ENST00000608214 MRC2Q9UBG0 1479 aa13.5□□□□□ -0.25
AP003481.1-202ENST00000608214 NCBP3Q53F19 620 aaKnown RBP13.49□□□□□ -0.25
AP003481.1-202ENST00000608214 CADPSQ9ULU8 1353 aa13.48□□□□□ -0.25
AP003481.1-202ENST00000608214 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.42□□□□□ -0.26
AP003481.1-202ENST00000608214 OSCARQ8IYS5 282 aa13.38□□□□□ -0.27
AP003481.1-202ENST00000608214 CEP164Q9UPV0 1460 aa13.37□□□□□ -0.27
AP003481.1-202ENST00000608214 FANCD2Q9BXW9 1451 aa13.33□□□□□ -0.28
AP003481.1-202ENST00000608214 WIZO95785 1651 aa13.32□□□□□ -0.28
AP003481.1-202ENST00000608214 RIMBP3CA6NJZ7 1639 aa13.28□□□□□ -0.28
AP003481.1-202ENST00000608214 RIMBP3BA6NNM3 1639 aa13.28□□□□□ -0.28
AP003481.1-202ENST00000608214 RIMBP3Q9UFD9 1639 aa13.28□□□□□ -0.28
AP003481.1-202ENST00000608214 CFTRP13569 1480 aa13.28□□□□□ -0.28
AP003481.1-202ENST00000608214 URB2Q14146 1524 aaKnown RBP13.27□□□□□ -0.29
AP003481.1-202ENST00000608214 NPM3O75607 178 aaKnown RBP13.26□□□□□ -0.29
AP003481.1-202ENST00000608214 ARHGEF11O15085 1522 aa13.2□□□□□ -0.3
AP003481.1-202ENST00000608214 ZNF608Q9ULD9 1512 aaPredicted RBP13.15□□□□□ -0.3
AP003481.1-202ENST00000608214 U3KPZ7 1027 aaPredicted RBP13.14□□□□□ -0.31
AP003481.1-202ENST00000608214 PRDM2Q13029 1718 aa13.12□□□□□ -0.31
AP003481.1-202ENST00000608214 TOP2AP11388 1531 aaKnown RBP13.12□□□□□ -0.31
AP003481.1-202ENST00000608214 IFT140Q96RY7 1462 aa13.11□□□□□ -0.31
AP003481.1-202ENST00000608214 POTEHQ6S545 545 aa13.1□□□□□ -0.31
AP003481.1-202ENST00000608214 CYB5RLQ6IPT4 315 aa13.09□□□□□ -0.31
AP003481.1-202ENST00000608214 RSF1Q96T23 1441 aaPredicted RBP13.09□□□□□ -0.31
AP003481.1-202ENST00000608214 DSG3P32926 999 aa13.08□□□□□ -0.32
AP003481.1-202ENST00000608214 EIF4G3O43432 1585 aaKnown RBP13.06□□□□□ -0.32
AP003481.1-202ENST00000608214 ARAP1Q96P48 1450 aa13.05□□□□□ -0.32
AP003481.1-202ENST00000608214 TOPBP1Q92547 1522 aa13.05□□□□□ -0.32
AP003481.1-202ENST00000608214 CHD1O14646 1710 aa13.03□□□□□ -0.32
AP003481.1-202ENST00000608214 TRHP20396 242 aaPredicted RBP13.02□□□□□ -0.33
AP003481.1-202ENST00000608214 SPINK5Q9NQ38 1064 aaPredicted RBP13.02□□□□□ -0.33
AP003481.1-202ENST00000608214 CAPN15O75808 1086 aa12.99□□□□□ -0.33
AP003481.1-202ENST00000608214 TARBP1Q13395 1621 aaKnown RBP12.99□□□□□ -0.33
AP003481.1-202ENST00000608214 ABCC8Q09428 1581 aa12.98□□□□□ -0.33
AP003481.1-202ENST00000608214 CCDC88BA6NC98 1476 aa12.97□□□□□ -0.33
AP003481.1-202ENST00000608214 AQRO60306 1485 aaKnown RBP eCLIP12.97□□□□□ -0.33
AP003481.1-202ENST00000608214 DNMBPQ6XZF7 1577 aa12.96□□□□□ -0.33
AP003481.1-202ENST00000608214 POLA1P09884 1462 aaPredicted RBP12.9□□□□□ -0.34
AP003481.1-202ENST00000608214 CLASP1Q7Z460 1538 aa12.89□□□□□ -0.35
AP003481.1-202ENST00000608214 FBLN2P98095 1184 aa12.89□□□□□ -0.35
AP003481.1-202ENST00000608214 RAD54L2Q9Y4B4 1467 aa12.85□□□□□ -0.35
AP003481.1-202ENST00000608214 TDRD9Q8NDG6 1382 aaKnown RBP12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms