RNA–Protein interactions for RNA: ENST00000602150.2

SCN1B-205, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 2

Gene SCN1B, Length 3,461 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-205ENST00000602150 NISCHQ9Y2I1 1504 aa23.3■■□□□ 1.32
SCN1B-205ENST00000602150 DCAF8L2P0C7V8 631 aa20.32■□□□□ 0.84
SCN1B-205ENST00000602150 SHROOM4Q9ULL8 1493 aa20.07■□□□□ 0.8
SCN1B-205ENST00000602150 CCDC180Q9P1Z9 1646 aa19.84■□□□□ 0.77
SCN1B-205ENST00000602150 ABCC9O60706 1549 aa19.57■□□□□ 0.72
SCN1B-205ENST00000602150 ZCCHC6Q5VYS8 1495 aaKnown RBP19.52■□□□□ 0.72
SCN1B-205ENST00000602150 SUPT5HO00267 1087 aaKnown RBP19.37■□□□□ 0.69
SCN1B-205ENST00000602150 SCRIBQ14160 1630 aa18.98■□□□□ 0.63
SCN1B-205ENST00000602150 DCAF1Q9Y4B6 1507 aa18.81■□□□□ 0.6
SCN1B-205ENST00000602150 PABPN1Q86U42 306 aaKnown RBP eCLIP18.76■□□□□ 0.59
SCN1B-205ENST00000602150 NACADO15069 1562 aa18.62■□□□□ 0.57
SCN1B-205ENST00000602150 RB1CC1Q8TDY2 1594 aa18.56■□□□□ 0.56
SCN1B-205ENST00000602150 CECR2Q9BXF3 1484 aa18.44■□□□□ 0.54
SCN1B-205ENST00000602150 MYO15BQ96JP2 1530 aa18.44■□□□□ 0.54
SCN1B-205ENST00000602150 RSF1Q96T23 1441 aaPredicted RBP18.3■□□□□ 0.52
SCN1B-205ENST00000602150 MROH2BQ7Z745 1585 aa18.21■□□□□ 0.51
SCN1B-205ENST00000602150 HRCP23327 699 aa18.21■□□□□ 0.51
SCN1B-205ENST00000602150 UNC13AQ9UPW8 1703 aa18.2■□□□□ 0.5
SCN1B-205ENST00000602150 CHIC1Q5VXU3 224 aa18.19■□□□□ 0.5
SCN1B-205ENST00000602150 EHMT2Q96KQ7 1210 aa18.17■□□□□ 0.5
SCN1B-205ENST00000602150 WIZO95785 1651 aa18.08■□□□□ 0.49
SCN1B-205ENST00000602150 BICRAQ9NZM4 1560 aa18.06■□□□□ 0.48
SCN1B-205ENST00000602150 FAM9AQ8IZU1 332 aaPredicted RBP18.04■□□□□ 0.48
SCN1B-205ENST00000602150 BAZ1AQ9NRL2 1556 aaPredicted RBP17.92■□□□□ 0.46
SCN1B-205ENST00000602150 TRIM41Q8WV44 630 aa17.89■□□□□ 0.45
SCN1B-205ENST00000602150 LOC105371045A0A1W2PR82 267 aa17.88■□□□□ 0.45
SCN1B-205ENST00000602150 SMARCA4P51532 1647 aa17.87■□□□□ 0.45
SCN1B-205ENST00000602150 PCGF6Q9BYE7 350 aa17.73■□□□□ 0.43
SCN1B-205ENST00000602150 PPARGC1BQ86YN6 1023 aaKnown RBP17.72■□□□□ 0.43
SCN1B-205ENST00000602150 CCDC88BA6NC98 1476 aa17.69■□□□□ 0.42
SCN1B-205ENST00000602150 ATAD2BQ9ULI0 1458 aa17.64■□□□□ 0.41
SCN1B-205ENST00000602150 BAZ1BQ9UIG0 1483 aaKnown RBP17.64■□□□□ 0.41
SCN1B-205ENST00000602150 TOP2AP11388 1531 aaKnown RBP17.63■□□□□ 0.41
SCN1B-205ENST00000602150 EIF4G1Q04637 1599 aaKnown RBP17.59■□□□□ 0.41
SCN1B-205ENST00000602150 ABCC8Q09428 1581 aa17.58■□□□□ 0.41
SCN1B-205ENST00000602150 SMARCA2P51531 1590 aa17.56■□□□□ 0.4
SCN1B-205ENST00000602150 PELP1Q8IZL8 1130 aaKnown RBP17.55■□□□□ 0.4
SCN1B-205ENST00000602150 DNAJC5BQ9UF47 199 aa17.54■□□□□ 0.4
SCN1B-205ENST00000602150 RANGAP1P46060 587 aaPredicted RBP17.44■□□□□ 0.38
SCN1B-205ENST00000602150 CC2D2AQ9P2K1 1620 aa17.37■□□□□ 0.37
SCN1B-205ENST00000602150 TTBK1Q5TCY1 1321 aaPredicted RBP17.36■□□□□ 0.37
SCN1B-205ENST00000602150 PEG3Q9GZU2 1588 aa17.32■□□□□ 0.36
SCN1B-205ENST00000602150 SOGA1O94964 1423 aa17.3■□□□□ 0.36
SCN1B-205ENST00000602150 NCAPD3P42695 1498 aa17.29■□□□□ 0.36
SCN1B-205ENST00000602150 RUSC2Q8N2Y8 1516 aa17.26■□□□□ 0.35
SCN1B-205ENST00000602150 TRIM26Q12899 539 aaPredicted RBP17.26■□□□□ 0.35
SCN1B-205ENST00000602150 WRNQ14191 1432 aaPredicted RBP eCLIP17.26■□□□□ 0.35
SCN1B-205ENST00000602150 UBTFP17480 764 aaKnown RBP17.25■□□□□ 0.35
SCN1B-205ENST00000602150 SCAF1Q9H7N4 1312 aaKnown RBP17.19■□□□□ 0.34
SCN1B-205ENST00000602150 NESP48681 1621 aa17.19■□□□□ 0.34
SCN1B-205ENST00000602150 HMGXB3Q12766 1538 aa17.16■□□□□ 0.34
SCN1B-205ENST00000602150 SYNJ1O43426 1573 aa17.15■□□□□ 0.34
SCN1B-205ENST00000602150 ZEB1P37275 1124 aaPredicted RBP17.12■□□□□ 0.33
SCN1B-205ENST00000602150 CSRNP3Q8WYN3 585 aa17.12■□□□□ 0.33
SCN1B-205ENST00000602150 CADPSQ9ULU8 1353 aa17.07■□□□□ 0.32
SCN1B-205ENST00000602150 CFTRP13569 1480 aa17.02■□□□□ 0.31
SCN1B-205ENST00000602150 CUX1P39880 1505 aa16.96■□□□□ 0.31
SCN1B-205ENST00000602150 FANCD2Q9BXW9 1451 aa16.95■□□□□ 0.3
SCN1B-205ENST00000602150 MYT1Q01538 1121 aa16.87■□□□□ 0.29
SCN1B-205ENST00000602150 RAD54L2Q9Y4B4 1467 aa16.86■□□□□ 0.29
SCN1B-205ENST00000602150 CUX2O14529 1486 aa16.86■□□□□ 0.29
SCN1B-205ENST00000602150 RAPGEF2Q9Y4G8 1499 aa16.85■□□□□ 0.29
SCN1B-205ENST00000602150 CEP162Q5TB80 1403 aa16.84■□□□□ 0.29
SCN1B-205ENST00000602150 TOP2BQ02880 1626 aa16.84■□□□□ 0.29
SCN1B-205ENST00000602150 FGD5Q6ZNL6 1462 aa16.83■□□□□ 0.29
SCN1B-205ENST00000602150 P3H3Q8IVL6 736 aa16.83■□□□□ 0.28
SCN1B-205ENST00000602150 TDRD9Q8NDG6 1382 aaKnown RBP16.8■□□□□ 0.28
SCN1B-205ENST00000602150 GOLGA3Q08378 1498 aa16.78■□□□□ 0.28
SCN1B-205ENST00000602150 ATP1B4Q9UN42 357 aaPredicted RBP16.78■□□□□ 0.28
SCN1B-205ENST00000602150 CEP164Q9UPV0 1460 aa16.78■□□□□ 0.28
SCN1B-205ENST00000602150 ACIN1Q9UKV3 1341 aaKnown RBP16.78■□□□□ 0.28
SCN1B-205ENST00000602150 KIF27Q86VH2 1401 aa16.76■□□□□ 0.27
SCN1B-205ENST00000602150 EEA1Q15075 1411 aa16.75■□□□□ 0.27
SCN1B-205ENST00000602150 TNIKQ9UKE5 1360 aa16.72■□□□□ 0.27
SCN1B-205ENST00000602150 PDS5BQ9NTI5 1447 aa16.72■□□□□ 0.27
SCN1B-205ENST00000602150 TOPBP1Q92547 1522 aa16.71■□□□□ 0.27
SCN1B-205ENST00000602150 NEUROD1Q13562 356 aa16.71■□□□□ 0.27
SCN1B-205ENST00000602150 BIVM-ERCC5R4GMW8 1640 aa16.71■□□□□ 0.27
SCN1B-205ENST00000602150 URB2Q14146 1524 aaKnown RBP16.7■□□□□ 0.26
SCN1B-205ENST00000602150 ERCC6Q03468 1493 aa16.7■□□□□ 0.26
SCN1B-205ENST00000602150 CLIP1P30622 1438 aa16.69■□□□□ 0.26
SCN1B-205ENST00000602150 POLA1P09884 1462 aaPredicted RBP16.69■□□□□ 0.26
SCN1B-205ENST00000602150 KIF21AQ7Z4S6 1674 aa16.66■□□□□ 0.26
SCN1B-205ENST00000602150 FBLN2P98095 1184 aa16.66■□□□□ 0.26
SCN1B-205ENST00000602150 IGF1RP08069 1367 aa16.65■□□□□ 0.26
SCN1B-205ENST00000602150 APLP2Q06481 763 aa16.65■□□□□ 0.26
SCN1B-205ENST00000602150 CARMIL1Q5VZK9 1371 aa16.64■□□□□ 0.25
SCN1B-205ENST00000602150 LAMC3Q9Y6N6 1575 aa16.63■□□□□ 0.25
SCN1B-205ENST00000602150 ARID3CA6NKF2 412 aa16.62■□□□□ 0.25
SCN1B-205ENST00000602150 PRDM2Q13029 1718 aa16.59■□□□□ 0.25
SCN1B-205ENST00000602150 DNMBPQ6XZF7 1577 aa16.59■□□□□ 0.25
SCN1B-205ENST00000602150 AQRO60306 1485 aaKnown RBP eCLIP16.59■□□□□ 0.25
SCN1B-205ENST00000602150 GTF3C3Q9Y5Q9 886 aa16.58■□□□□ 0.24
SCN1B-205ENST00000602150 HNRNPUL2Q1KMD3 747 aaKnown RBP16.56■□□□□ 0.24
SCN1B-205ENST00000602150 PRXQ9BXM0 1461 aa16.55■□□□□ 0.24
SCN1B-205ENST00000602150 KIF21BO75037 1637 aa16.54■□□□□ 0.24
SCN1B-205ENST00000602150 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.53■□□□□ 0.24
SCN1B-205ENST00000602150 ITGAEP38570 1179 aa16.51■□□□□ 0.23
SCN1B-205ENST00000602150 ZNF608Q9ULD9 1512 aaPredicted RBP16.49■□□□□ 0.23
SCN1B-205ENST00000602150 CENPBP07199 599 aaPredicted RBP16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms