RNA–Protein interactions for RNA: ENST00000601803.5

DDX49-212, Transcript of DEAD-box helicase 49, humanhuman

TSL 2

Gene DDX49, Length 1,550 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49-212ENST00000601803 NISCHQ9Y2I1 1504 aa35.57■■■■□ 3.29
DDX49-212ENST00000601803 CCDC180Q9P1Z9 1646 aa30.55■■■□□ 2.48
DDX49-212ENST00000601803 ZCCHC6Q5VYS8 1495 aaKnown RBP30.11■■■□□ 2.41
DDX49-212ENST00000601803 SHROOM4Q9ULL8 1493 aa29.57■■■□□ 2.32
DDX49-212ENST00000601803 DCAF1Q9Y4B6 1507 aa29.54■■■□□ 2.32
DDX49-212ENST00000601803 SUPT5HO00267 1087 aaKnown RBP29.07■■■□□ 2.24
DDX49-212ENST00000601803 DCAF8L2P0C7V8 631 aa28.85■■■□□ 2.21
DDX49-212ENST00000601803 MYO15BQ96JP2 1530 aa28.81■■■□□ 2.2
DDX49-212ENST00000601803 CHIC1Q5VXU3 224 aa28.52■■■□□ 2.16
DDX49-212ENST00000601803 ABCC9O60706 1549 aa28.37■■■□□ 2.13
DDX49-212ENST00000601803 NACADO15069 1562 aa28.21■■■□□ 2.11
DDX49-212ENST00000601803 SCRIBQ14160 1630 aa28.08■■■□□ 2.09
DDX49-212ENST00000601803 RSF1Q96T23 1441 aaPredicted RBP28■■■□□ 2.07
DDX49-212ENST00000601803 RB1CC1Q8TDY2 1594 aa27.85■■■□□ 2.05
DDX49-212ENST00000601803 HRCP23327 699 aa27.56■■■□□ 2
DDX49-212ENST00000601803 MROH2BQ7Z745 1585 aa27.45■■□□□ 1.99
DDX49-212ENST00000601803 CECR2Q9BXF3 1484 aa27.45■■□□□ 1.99
DDX49-212ENST00000601803 BAZ1AQ9NRL2 1556 aaPredicted RBP27.41■■□□□ 1.98
DDX49-212ENST00000601803 LOC105371045A0A1W2PR82 267 aa27.36■■□□□ 1.97
DDX49-212ENST00000601803 TRIM41Q8WV44 630 aa27.36■■□□□ 1.97
DDX49-212ENST00000601803 PCGF6Q9BYE7 350 aa27.32■■□□□ 1.96
DDX49-212ENST00000601803 WIZO95785 1651 aa27.26■■□□□ 1.95
DDX49-212ENST00000601803 TRIM26Q12899 539 aaPredicted RBP27.21■■□□□ 1.95
DDX49-212ENST00000601803 TOP2AP11388 1531 aaKnown RBP27.11■■□□□ 1.93
DDX49-212ENST00000601803 EIF4G1Q04637 1599 aaKnown RBP27.08■■□□□ 1.93
DDX49-212ENST00000601803 SMARCA4P51532 1647 aa27.08■■□□□ 1.93
DDX49-212ENST00000601803 UNC13AQ9UPW8 1703 aa27.03■■□□□ 1.92
DDX49-212ENST00000601803 SMARCA2P51531 1590 aa26.84■■□□□ 1.89
DDX49-212ENST00000601803 ZEB1P37275 1124 aaPredicted RBP26.84■■□□□ 1.89
DDX49-212ENST00000601803 CCDC88BA6NC98 1476 aa26.81■■□□□ 1.88
DDX49-212ENST00000601803 PEG3Q9GZU2 1588 aa26.8■■□□□ 1.88
DDX49-212ENST00000601803 BICRAQ9NZM4 1560 aa26.74■■□□□ 1.87
DDX49-212ENST00000601803 FAM9AQ8IZU1 332 aaPredicted RBP26.73■■□□□ 1.87
DDX49-212ENST00000601803 EEA1Q15075 1411 aa26.68■■□□□ 1.86
DDX49-212ENST00000601803 ABCC8Q09428 1581 aa26.5■■□□□ 1.83
DDX49-212ENST00000601803 WRNQ14191 1432 aaPredicted RBP eCLIP26.5■■□□□ 1.83
DDX49-212ENST00000601803 PPARGC1BQ86YN6 1023 aaKnown RBP26.49■■□□□ 1.83
DDX49-212ENST00000601803 TNIKQ9UKE5 1360 aa26.43■■□□□ 1.82
DDX49-212ENST00000601803 ATAD2BQ9ULI0 1458 aa26.38■■□□□ 1.81
DDX49-212ENST00000601803 PABPN1Q86U42 306 aaKnown RBP eCLIP26.34■■□□□ 1.81
DDX49-212ENST00000601803 CSRNP3Q8WYN3 585 aa26.32■■□□□ 1.8
DDX49-212ENST00000601803 BAZ1BQ9UIG0 1483 aaKnown RBP26.28■■□□□ 1.8
DDX49-212ENST00000601803 SOGA1O94964 1423 aa26.28■■□□□ 1.8
DDX49-212ENST00000601803 CEP162Q5TB80 1403 aa26.27■■□□□ 1.8
DDX49-212ENST00000601803 GOLGA3Q08378 1498 aa26.25■■□□□ 1.79
DDX49-212ENST00000601803 EHMT2Q96KQ7 1210 aa26.19■■□□□ 1.78
DDX49-212ENST00000601803 KIF21BO75037 1637 aa26.18■■□□□ 1.78
DDX49-212ENST00000601803 CEP164Q9UPV0 1460 aa26.16■■□□□ 1.78
DDX49-212ENST00000601803 SYNJ1O43426 1573 aa26.1■■□□□ 1.77
DDX49-212ENST00000601803 HMGXB3Q12766 1538 aa26.08■■□□□ 1.77
DDX49-212ENST00000601803 RUSC2Q8N2Y8 1516 aa26.08■■□□□ 1.77
DDX49-212ENST00000601803 NCAPD3P42695 1498 aa26.03■■□□□ 1.76
DDX49-212ENST00000601803 TOP2BQ02880 1626 aa26■■□□□ 1.75
DDX49-212ENST00000601803 UBTFP17480 764 aaKnown RBP26■■□□□ 1.75
DDX49-212ENST00000601803 BIVM-ERCC5R4GMW8 1640 aa25.96■■□□□ 1.75
DDX49-212ENST00000601803 CCER1Q8TC90 406 aaPredicted RBP25.86■■□□□ 1.73
DDX49-212ENST00000601803 CLIP1P30622 1438 aa25.83■■□□□ 1.73
DDX49-212ENST00000601803 ERICH3Q5RHP9 1530 aa25.83■■□□□ 1.73
DDX49-212ENST00000601803 VPS8Q8N3P4 1428 aa25.8■■□□□ 1.72
DDX49-212ENST00000601803 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.73■■□□□ 1.71
DDX49-212ENST00000601803 CFTRP13569 1480 aa25.73■■□□□ 1.71
DDX49-212ENST00000601803 RAPGEF2Q9Y4G8 1499 aa25.72■■□□□ 1.71
DDX49-212ENST00000601803 PRXQ9BXM0 1461 aa25.71■■□□□ 1.71
DDX49-212ENST00000601803 PRDM2Q13029 1718 aa25.65■■□□□ 1.7
DDX49-212ENST00000601803 KIF27Q86VH2 1401 aa25.61■■□□□ 1.69
DDX49-212ENST00000601803 CUX1P39880 1505 aa25.61■■□□□ 1.69
DDX49-212ENST00000601803 APLP2Q06481 763 aa25.61■■□□□ 1.69
DDX49-212ENST00000601803 CADPSQ9ULU8 1353 aa25.41■■□□□ 1.66
DDX49-212ENST00000601803 ARAP1Q96P48 1450 aa25.41■■□□□ 1.66
DDX49-212ENST00000601803 TTBK1Q5TCY1 1321 aaPredicted RBP25.39■■□□□ 1.66
DDX49-212ENST00000601803 CLSPNQ9HAW4 1339 aa25.39■■□□□ 1.66
DDX49-212ENST00000601803 DIEXFQ68CQ4 756 aaKnown RBP25.35■■□□□ 1.65
DDX49-212ENST00000601803 ZNF316A6NFI3 1004 aaPredicted RBP25.31■■□□□ 1.64
DDX49-212ENST00000601803 MAP3K1Q13233 1512 aa25.29■■□□□ 1.64
DDX49-212ENST00000601803 RRBP1Q9P2E9 1410 aaKnown RBP25.25■■□□□ 1.63
DDX49-212ENST00000601803 IGF1RP08069 1367 aa25.24■■□□□ 1.63
DDX49-212ENST00000601803 HNRNPUL2Q1KMD3 747 aaKnown RBP25.22■■□□□ 1.63
DDX49-212ENST00000601803 ARHGAP35Q9NRY4 1499 aa25.22■■□□□ 1.63
DDX49-212ENST00000601803 CUX2O14529 1486 aa25.21■■□□□ 1.63
DDX49-212ENST00000601803 CC2D2AQ9P2K1 1620 aa25.17■■□□□ 1.62
DDX49-212ENST00000601803 FGD5Q6ZNL6 1462 aa25.16■■□□□ 1.62
DDX49-212ENST00000601803 CENPBP07199 599 aaPredicted RBP25.16■■□□□ 1.62
DDX49-212ENST00000601803 CARMIL1Q5VZK9 1371 aa25.14■■□□□ 1.61
DDX49-212ENST00000601803 ACIN1Q9UKV3 1341 aaKnown RBP25.13■■□□□ 1.61
DDX49-212ENST00000601803 DNMBPQ6XZF7 1577 aa25.1■■□□□ 1.61
DDX49-212ENST00000601803 SCAF1Q9H7N4 1312 aaKnown RBP25.1■■□□□ 1.61
DDX49-212ENST00000601803 PELP1Q8IZL8 1130 aaKnown RBP25.09■■□□□ 1.61
DDX49-212ENST00000601803 FANCD2Q9BXW9 1451 aa25.09■■□□□ 1.61
DDX49-212ENST00000601803 RANGAP1P46060 587 aaPredicted RBP25.05■■□□□ 1.6
DDX49-212ENST00000601803 FHAD1B1AJZ9 1412 aa25.05■■□□□ 1.6
DDX49-212ENST00000601803 KANK4Q5T7N3 995 aaPredicted RBP25.05■■□□□ 1.6
DDX49-212ENST00000601803 ABCA10Q8WWZ4 1543 aa25.04■■□□□ 1.6
DDX49-212ENST00000601803 CCNB3Q8WWL7 1395 aa25.04■■□□□ 1.6
DDX49-212ENST00000601803 DHX57Q6P158 1386 aaKnown RBP25.03■■□□□ 1.6
DDX49-212ENST00000601803 TIAM1Q13009 1591 aa25.01■■□□□ 1.59
DDX49-212ENST00000601803 CUL7Q14999 1698 aa24.98■■□□□ 1.59
DDX49-212ENST00000601803 EFCAB5A4FU69 1503 aa24.97■■□□□ 1.59
DDX49-212ENST00000601803 LAMC3Q9Y6N6 1575 aa24.95■■□□□ 1.58
DDX49-212ENST00000601803 TOPBP1Q92547 1522 aa24.94■■□□□ 1.58
DDX49-212ENST00000601803 AQRO60306 1485 aaKnown RBP eCLIP24.92■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 109.4 ms