RNA–Protein interactions for RNA: ENST00000599335.5

SUPT5H-216, Transcript of SPT5 homolog, DSIF elongation factor subunit, humanhuman

TSL 2

Gene SUPT5H, Length 3,796 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT5H-216ENST00000599335 NISCHQ9Y2I1 1504 aa23.51■■□□□ 1.35
SUPT5H-216ENST00000599335 DCAF8L2P0C7V8 631 aa21.34■■□□□ 1.01
SUPT5H-216ENST00000599335 ABCC9O60706 1549 aa20.37■□□□□ 0.85
SUPT5H-216ENST00000599335 SHROOM4Q9ULL8 1493 aa20.04■□□□□ 0.8
SUPT5H-216ENST00000599335 CCDC180Q9P1Z9 1646 aa20.04■□□□□ 0.8
SUPT5H-216ENST00000599335 ZCCHC6Q5VYS8 1495 aaKnown RBP19.66■□□□□ 0.74
SUPT5H-216ENST00000599335 PELP1Q8IZL8 1130 aaKnown RBP19.65■□□□□ 0.74
SUPT5H-216ENST00000599335 PABPN1Q86U42 306 aaKnown RBP eCLIP19.65■□□□□ 0.748e-7■■■□□ 18.4
SUPT5H-216ENST00000599335 MYT1Q01538 1121 aa19.52■□□□□ 0.72
SUPT5H-216ENST00000599335 SUPT5HO00267 1087 aaKnown RBP19.35■□□□□ 0.69
SUPT5H-216ENST00000599335 SCRIBQ14160 1630 aa19.06■□□□□ 0.64
SUPT5H-216ENST00000599335 DCAF1Q9Y4B6 1507 aa19.04■□□□□ 0.64
SUPT5H-216ENST00000599335 NACADO15069 1562 aa18.86■□□□□ 0.61
SUPT5H-216ENST00000599335 RB1CC1Q8TDY2 1594 aa18.85■□□□□ 0.61
SUPT5H-216ENST00000599335 MYO15BQ96JP2 1530 aa18.73■□□□□ 0.59
SUPT5H-216ENST00000599335 TTBK1Q5TCY1 1321 aaPredicted RBP18.62■□□□□ 0.57
SUPT5H-216ENST00000599335 CECR2Q9BXF3 1484 aa18.59■□□□□ 0.57
SUPT5H-216ENST00000599335 RSF1Q96T23 1441 aaPredicted RBP18.43■□□□□ 0.54
SUPT5H-216ENST00000599335 DNAJC5BQ9UF47 199 aa18.43■□□□□ 0.54
SUPT5H-216ENST00000599335 CHIC1Q5VXU3 224 aa18.42■□□□□ 0.54
SUPT5H-216ENST00000599335 SLC24A1O60721 1099 aa18.38■□□□□ 0.53
SUPT5H-216ENST00000599335 EHMT2Q96KQ7 1210 aa18.37■□□□□ 0.53
SUPT5H-216ENST00000599335 UNC13AQ9UPW8 1703 aa18.37■□□□□ 0.53
SUPT5H-216ENST00000599335 MROH2BQ7Z745 1585 aa18.35■□□□□ 0.53
SUPT5H-216ENST00000599335 BICRAQ9NZM4 1560 aa18.3■□□□□ 0.52
SUPT5H-216ENST00000599335 ERICH6Q7L0X2 663 aa18.29■□□□□ 0.52
SUPT5H-216ENST00000599335 PRKCSHP14314 528 aaPredicted RBP18.28■□□□□ 0.52
SUPT5H-216ENST00000599335 WIZO95785 1651 aa18.17■□□□□ 0.5
SUPT5H-216ENST00000599335 FAM9AQ8IZU1 332 aaPredicted RBP18.07■□□□□ 0.48
SUPT5H-216ENST00000599335 BAZ1AQ9NRL2 1556 aaPredicted RBP18.06■□□□□ 0.48
SUPT5H-216ENST00000599335 LOC105371045A0A1W2PR82 267 aa18.01■□□□□ 0.47
SUPT5H-216ENST00000599335 SMARCA4P51532 1647 aa18■□□□□ 0.47
SUPT5H-216ENST00000599335 TRIM41Q8WV44 630 aa17.95■□□□□ 0.46
SUPT5H-216ENST00000599335 RANGAP1P46060 587 aaPredicted RBP17.89■□□□□ 0.45
SUPT5H-216ENST00000599335 HRCP23327 699 aa17.86■□□□□ 0.45
SUPT5H-216ENST00000599335 PPARGC1BQ86YN6 1023 aaKnown RBP17.86■□□□□ 0.45
SUPT5H-216ENST00000599335 ATAD2BQ9ULI0 1458 aa17.85■□□□□ 0.45
SUPT5H-216ENST00000599335 CCDC88BA6NC98 1476 aa17.84■□□□□ 0.45
SUPT5H-216ENST00000599335 BAZ1BQ9UIG0 1483 aaKnown RBP17.83■□□□□ 0.44
SUPT5H-216ENST00000599335 PCGF6Q9BYE7 350 aa17.82■□□□□ 0.44
SUPT5H-216ENST00000599335 EIF4G1Q04637 1599 aaKnown RBP17.8■□□□□ 0.44
SUPT5H-216ENST00000599335 BCL11AQ9H165 835 aa17.76■□□□□ 0.43
SUPT5H-216ENST00000599335 TOP2AP11388 1531 aaKnown RBP17.74■□□□□ 0.43
SUPT5H-216ENST00000599335 FBLN2P98095 1184 aa17.73■□□□□ 0.43
SUPT5H-216ENST00000599335 CC2D2AQ9P2K1 1620 aa17.72■□□□□ 0.43
SUPT5H-216ENST00000599335 SMARCA2P51531 1590 aa17.67■□□□□ 0.42
SUPT5H-216ENST00000599335 ERCC6Q03468 1493 aa17.66■□□□□ 0.42
SUPT5H-216ENST00000599335 ABCC8Q09428 1581 aa17.61■□□□□ 0.41
SUPT5H-216ENST00000599335 APLP2Q06481 763 aa17.58■□□□□ 0.41
SUPT5H-216ENST00000599335 NCAPD3P42695 1498 aa17.56■□□□□ 0.4
SUPT5H-216ENST00000599335 PEG3Q9GZU2 1588 aa17.53■□□□□ 0.4
SUPT5H-216ENST00000599335 NESP48681 1621 aa17.5■□□□□ 0.39
SUPT5H-216ENST00000599335 UBTFP17480 764 aaKnown RBP17.41■□□□□ 0.38
SUPT5H-216ENST00000599335 ATP1B4Q9UN42 357 aaPredicted RBP17.4■□□□□ 0.38
SUPT5H-216ENST00000599335 SCAF1Q9H7N4 1312 aaKnown RBP17.4■□□□□ 0.38
SUPT5H-216ENST00000599335 TRIM26Q12899 539 aaPredicted RBP17.39■□□□□ 0.38
SUPT5H-216ENST00000599335 CADPSQ9ULU8 1353 aa17.37■□□□□ 0.37
SUPT5H-216ENST00000599335 SOGA1O94964 1423 aa17.36■□□□□ 0.37
SUPT5H-216ENST00000599335 WRNQ14191 1432 aaPredicted RBP eCLIP17.36■□□□□ 0.37
SUPT5H-216ENST00000599335 HMGXB3Q12766 1538 aa17.35■□□□□ 0.37
SUPT5H-216ENST00000599335 RUSC2Q8N2Y8 1516 aa17.33■□□□□ 0.37
SUPT5H-216ENST00000599335 CENPBP07199 599 aaPredicted RBP17.32■□□□□ 0.36
SUPT5H-216ENST00000599335 DAXXQ9UER7 740 aaPredicted RBP17.29■□□□□ 0.36
SUPT5H-216ENST00000599335 PDS5BQ9NTI5 1447 aa17.28■□□□□ 0.36
SUPT5H-216ENST00000599335 EIF5BO60841 1220 aaKnown RBP17.27■□□□□ 0.35
SUPT5H-216ENST00000599335 CSRNP3Q8WYN3 585 aa17.23■□□□□ 0.35
SUPT5H-216ENST00000599335 CFTRP13569 1480 aa17.23■□□□□ 0.35
SUPT5H-216ENST00000599335 SYNJ1O43426 1573 aa17.21■□□□□ 0.34
SUPT5H-216ENST00000599335 ARID3CA6NKF2 412 aa17.19■□□□□ 0.34
SUPT5H-216ENST00000599335 CHMP7Q8WUX9 453 aaPredicted RBP17.18■□□□□ 0.34
SUPT5H-216ENST00000599335 TDRD9Q8NDG6 1382 aaKnown RBP17.18■□□□□ 0.34
SUPT5H-216ENST00000599335 P3H3Q8IVL6 736 aa17.17■□□□□ 0.34
SUPT5H-216ENST00000599335 FANCD2Q9BXW9 1451 aa17.17■□□□□ 0.34
SUPT5H-216ENST00000599335 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.14■□□□□ 0.33
SUPT5H-216ENST00000599335 HNRNPUL2Q1KMD3 747 aaKnown RBP17.14■□□□□ 0.33
SUPT5H-216ENST00000599335 CEP164Q9UPV0 1460 aa17.11■□□□□ 0.33
SUPT5H-216ENST00000599335 CUX1P39880 1505 aa17.08■□□□□ 0.33
SUPT5H-216ENST00000599335 RAD54L2Q9Y4B4 1467 aa17■□□□□ 0.31
SUPT5H-216ENST00000599335 CUX2O14529 1486 aa16.95■□□□□ 0.3
SUPT5H-216ENST00000599335 FGD5Q6ZNL6 1462 aa16.95■□□□□ 0.3
SUPT5H-216ENST00000599335 TOP2BQ02880 1626 aa16.95■□□□□ 0.3
SUPT5H-216ENST00000599335 AQRO60306 1485 aaKnown RBP eCLIP16.92■□□□□ 0.33e-7■■■■□ 24.7
SUPT5H-216ENST00000599335 CEP162Q5TB80 1403 aa16.92■□□□□ 0.3
SUPT5H-216ENST00000599335 ZEB1P37275 1124 aaPredicted RBP16.92■□□□□ 0.3
SUPT5H-216ENST00000599335 RAPGEF2Q9Y4G8 1499 aa16.9■□□□□ 0.3
SUPT5H-216ENST00000599335 EEA1Q15075 1411 aa16.9■□□□□ 0.3
SUPT5H-216ENST00000599335 URB2Q14146 1524 aaKnown RBP16.88■□□□□ 0.29
SUPT5H-216ENST00000599335 CCER1Q8TC90 406 aaPredicted RBP16.88■□□□□ 0.29
SUPT5H-216ENST00000599335 KIF27Q86VH2 1401 aa16.87■□□□□ 0.29
SUPT5H-216ENST00000599335 TOPBP1Q92547 1522 aa16.87■□□□□ 0.29
SUPT5H-216ENST00000599335 TNIKQ9UKE5 1360 aa16.87■□□□□ 0.29
SUPT5H-216ENST00000599335 GTF3C3Q9Y5Q9 886 aa16.85■□□□□ 0.29
SUPT5H-216ENST00000599335 LAMC3Q9Y6N6 1575 aa16.84■□□□□ 0.29
SUPT5H-216ENST00000599335 POLA1P09884 1462 aaPredicted RBP16.84■□□□□ 0.29
SUPT5H-216ENST00000599335 IGF1RP08069 1367 aa16.83■□□□□ 0.29
SUPT5H-216ENST00000599335 GOLGA3Q08378 1498 aa16.83■□□□□ 0.28
SUPT5H-216ENST00000599335 MRC2Q9UBG0 1479 aa16.83■□□□□ 0.28
SUPT5H-216ENST00000599335 CYB5RLQ6IPT4 315 aa16.83■□□□□ 0.28
SUPT5H-216ENST00000599335 OSCARQ8IYS5 282 aa16.81■□□□□ 0.28
SUPT5H-216ENST00000599335 BIVM-ERCC5R4GMW8 1640 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms