RNA–Protein interactions for RNA: ENST00000598270.1

VAV1-206, Transcript of vav guanine nucleotide exchange factor 1, humanhuman

TSL 2

Gene VAV1, Length 802 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAV1-206ENST00000598270 AEBP2Q6ZN18 517 aaPredicted RBP13.96□□□□□ -0.17
VAV1-206ENST00000598270 CHIC1Q5VXU3 224 aa13□□□□□ -0.33
VAV1-206ENST00000598270 SENP3Q9H4L4 574 aaPredicted RBP11.99□□□□□ -0.49
VAV1-206ENST00000598270 PHF23Q9BUL5 403 aaPredicted RBP11.74□□□□□ -0.53
VAV1-206ENST00000598270 POTEDQ86YR6 584 aa11.53□□□□□ -0.56
VAV1-206ENST00000598270 FOXD1Q16676 465 aa11.25□□□□□ -0.61
VAV1-206ENST00000598270 MSH5O43196 834 aa10.75□□□□□ -0.69
VAV1-206ENST00000598270 NISCHQ9Y2I1 1504 aa10.54□□□□□ -0.72
VAV1-206ENST00000598270 PIAS4Q8N2W9 510 aaPredicted RBP10.34□□□□□ -0.75
VAV1-206ENST00000598270 PPP6R1Q9UPN7 881 aa10.05□□□□□ -0.8
VAV1-206ENST00000598270 ADRA2BP18089 450 aa9.97□□□□□ -0.81
VAV1-206ENST00000598270 PLPPR3Q6T4P5 718 aa9.83□□□□□ -0.84
VAV1-206ENST00000598270 CACNB1Q02641 598 aaPredicted RBP9.57□□□□□ -0.88
VAV1-206ENST00000598270 ABCC9O60706 1549 aa9.56□□□□□ -0.88
VAV1-206ENST00000598270 DNAJC5BQ9UF47 199 aa9.54□□□□□ -0.88
VAV1-206ENST00000598270 DMRT2Q9Y5R5 561 aa9.43□□□□□ -0.9
VAV1-206ENST00000598270 DNAJC5Q9H3Z4 198 aa9.41□□□□□ -0.9
VAV1-206ENST00000598270 MAPK8IP2Q13387 824 aaPredicted RBP9.34□□□□□ -0.91
VAV1-206ENST00000598270 CCDC180Q9P1Z9 1646 aa9.24□□□□□ -0.93
VAV1-206ENST00000598270 RNF39Q9H2S5 420 aa9.14□□□□□ -0.95
VAV1-206ENST00000598270 SCAF1Q9H7N4 1312 aaKnown RBP9.12□□□□□ -0.95
VAV1-206ENST00000598270 DCAF8L1A6NGE4 600 aa8.99□□□□□ -0.97
VAV1-206ENST00000598270 C1QBPQ07021 282 aaKnown RBP8.96□□□□□ -0.98
VAV1-206ENST00000598270 POTEHQ6S545 545 aa8.91□□□□□ -0.98
VAV1-206ENST00000598270 ZCCHC6Q5VYS8 1495 aaKnown RBP8.89□□□□□ -0.99
VAV1-206ENST00000598270 HOXD11P31277 338 aaPredicted RBP8.85□□□□□ -0.99
VAV1-206ENST00000598270 PABPN1Q86U42 306 aaKnown RBP eCLIP8.84□□□□□ -0.99
VAV1-206ENST00000598270 TRIM41Q8WV44 630 aa8.79□□□□□ -1
VAV1-206ENST00000598270 DCAF1Q9Y4B6 1507 aa8.79□□□□□ -1
VAV1-206ENST00000598270 DCAF8L2P0C7V8 631 aa8.77□□□□□ -1.01
VAV1-206ENST00000598270 RB1CC1Q8TDY2 1594 aa8.76□□□□□ -1.01
VAV1-206ENST00000598270 CECR2Q9BXF3 1484 aa8.71□□□□□ -1.01
VAV1-206ENST00000598270 MYO15BQ96JP2 1530 aa8.65□□□□□ -1.02
VAV1-206ENST00000598270 RNF216Q9NWF9 866 aaPredicted RBP8.6□□□□□ -1.03
VAV1-206ENST00000598270 CUX2O14529 1486 aa8.57□□□□□ -1.04
VAV1-206ENST00000598270 SHROOM4Q9ULL8 1493 aa8.55□□□□□ -1.04
VAV1-206ENST00000598270 NACADO15069 1562 aa8.53□□□□□ -1.04
VAV1-206ENST00000598270 PPP4R3CPQ6ZMV5 832 aa8.53□□□□□ -1.04
VAV1-206ENST00000598270 CNKSR2Q8WXI2 1034 aa8.52□□□□□ -1.05
VAV1-206ENST00000598270 CC2D2AQ9P2K1 1620 aa8.51□□□□□ -1.05
VAV1-206ENST00000598270 ERCC6Q03468 1493 aa8.42□□□□□ -1.06
VAV1-206ENST00000598270 SCRIBQ14160 1630 aa8.4□□□□□ -1.07
VAV1-206ENST00000598270 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.38□□□□□ -1.07
VAV1-206ENST00000598270 BICRAQ9NZM4 1560 aa8.38□□□□□ -1.07
VAV1-206ENST00000598270 DSG3P32926 999 aa8.35□□□□□ -1.07
VAV1-206ENST00000598270 SUPT5HO00267 1087 aaKnown RBP8.33□□□□□ -1.08
VAV1-206ENST00000598270 EIF4G1Q04637 1599 aaKnown RBP8.33□□□□□ -1.08
VAV1-206ENST00000598270 UNC13AQ9UPW8 1703 aa8.29□□□□□ -1.08
VAV1-206ENST00000598270 TRHP20396 242 aaPredicted RBP8.23□□□□□ -1.09
VAV1-206ENST00000598270 ILDR1Q86SU0 546 aaPredicted RBP8.23□□□□□ -1.09
VAV1-206ENST00000598270 SPINK5Q9NQ38 1064 aaPredicted RBP8.22□□□□□ -1.09
VAV1-206ENST00000598270 CAPN15O75808 1086 aa8.2□□□□□ -1.1
VAV1-206ENST00000598270 RSF1Q96T23 1441 aaPredicted RBP8.19□□□□□ -1.1
VAV1-206ENST00000598270 U3KPZ7 1027 aaPredicted RBP8.17□□□□□ -1.1
VAV1-206ENST00000598270 BAZ1AQ9NRL2 1556 aaPredicted RBP8.17□□□□□ -1.1
VAV1-206ENST00000598270 OSCARQ8IYS5 282 aa8.15□□□□□ -1.1
VAV1-206ENST00000598270 MROH2BQ7Z745 1585 aa8.1□□□□□ -1.11
VAV1-206ENST00000598270 SMARCA4P51532 1647 aa8.1□□□□□ -1.11
VAV1-206ENST00000598270 WIZO95785 1651 aa8.08□□□□□ -1.12
VAV1-206ENST00000598270 SP7Q8TDD2 431 aaPredicted RBP8.07□□□□□ -1.12
VAV1-206ENST00000598270 PEG3Q9GZU2 1588 aa8.03□□□□□ -1.12
VAV1-206ENST00000598270 CHRDL2Q6WN34 429 aa8.03□□□□□ -1.12
VAV1-206ENST00000598270 TOP2AP11388 1531 aaKnown RBP8.03□□□□□ -1.12
VAV1-206ENST00000598270 NCBP3Q53F19 620 aaKnown RBP8.02□□□□□ -1.13
VAV1-206ENST00000598270 CYB5RLQ6IPT4 315 aa8□□□□□ -1.13
VAV1-206ENST00000598270 RBM42Q9BTD8 480 aaKnown RBP7.97□□□□□ -1.13
VAV1-206ENST00000598270 SMARCA2P51531 1590 aa7.97□□□□□ -1.13
VAV1-206ENST00000598270 ABCB7O75027 752 aa7.96□□□□□ -1.14
VAV1-206ENST00000598270 THOC2Q8NI27 1593 aaKnown RBP7.94□□□□□ -1.14
VAV1-206ENST00000598270 BAZ1BQ9UIG0 1483 aaKnown RBP7.94□□□□□ -1.14
VAV1-206ENST00000598270 NESP48681 1621 aa7.93□□□□□ -1.14
VAV1-206ENST00000598270 ZNF219Q9P2Y4 722 aaPredicted RBP7.92□□□□□ -1.14
VAV1-206ENST00000598270 RIMBP3CA6NJZ7 1639 aa7.92□□□□□ -1.14
VAV1-206ENST00000598270 RIMBP3BA6NNM3 1639 aa7.92□□□□□ -1.14
VAV1-206ENST00000598270 RIMBP3Q9UFD9 1639 aa7.92□□□□□ -1.14
VAV1-206ENST00000598270 NPM3O75607 178 aaKnown RBP7.91□□□□□ -1.14
VAV1-206ENST00000598270 PDS5BQ9NTI5 1447 aa7.9□□□□□ -1.14
VAV1-206ENST00000598270 CCDC88BA6NC98 1476 aa7.89□□□□□ -1.15
VAV1-206ENST00000598270 ARHGEF11O15085 1522 aa7.88□□□□□ -1.15
VAV1-206ENST00000598270 NCAPD3P42695 1498 aa7.87□□□□□ -1.15
VAV1-206ENST00000598270 ATAD2BQ9ULI0 1458 aa7.87□□□□□ -1.15
VAV1-206ENST00000598270 HMGXB3Q12766 1538 aa7.86□□□□□ -1.15
VAV1-206ENST00000598270 APLP2Q06481 763 aa7.85□□□□□ -1.15
VAV1-206ENST00000598270 PRDM2Q13029 1718 aa7.81□□□□□ -1.16
VAV1-206ENST00000598270 LMTK3Q96Q04 1460 aa7.81□□□□□ -1.16
VAV1-206ENST00000598270 MRC2Q9UBG0 1479 aa7.8□□□□□ -1.16
VAV1-206ENST00000598270 LAMC3Q9Y6N6 1575 aa7.8□□□□□ -1.16
VAV1-206ENST00000598270 SOCS7O14512 581 aa7.79□□□□□ -1.16
VAV1-206ENST00000598270 FBXO41Q8TF61 875 aa7.79□□□□□ -1.16
VAV1-206ENST00000598270 EEA1Q15075 1411 aa7.77□□□□□ -1.17
VAV1-206ENST00000598270 ABCC8Q09428 1581 aa7.76□□□□□ -1.17
VAV1-206ENST00000598270 ARAP1Q96P48 1450 aa7.74□□□□□ -1.17
VAV1-206ENST00000598270 WDR62O43379 1518 aa7.73□□□□□ -1.17
VAV1-206ENST00000598270 SLC4A2P04920 1241 aa7.73□□□□□ -1.17
VAV1-206ENST00000598270 WRNQ14191 1432 aaPredicted RBP eCLIP7.72□□□□□ -1.17
VAV1-206ENST00000598270 BIVM-ERCC5R4GMW8 1640 aa7.72□□□□□ -1.17
VAV1-206ENST00000598270 LOC105371045A0A1W2PR82 267 aa7.72□□□□□ -1.17
VAV1-206ENST00000598270 KIF21AQ7Z4S6 1674 aa7.71□□□□□ -1.18
VAV1-206ENST00000598270 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.71□□□□□ -1.18
VAV1-206ENST00000598270 HAX1O00165 279 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms