RNA–Protein interactions for RNA: ENST00000589475.1

EFTUD2-213, Transcript of elongation factor Tu GTP binding domain containing 2, humanhuman

TSL 2

Gene EFTUD2, Length 200 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFTUD2-213ENST00000589475 AEBP2Q6ZN18 517 aaPredicted RBP15.55■□□□□ 0.08
EFTUD2-213ENST00000589475 CHIC1Q5VXU3 224 aa15.11■□□□□ 0.01
EFTUD2-213ENST00000589475 PHF23Q9BUL5 403 aaPredicted RBP13.32□□□□□ -0.28
EFTUD2-213ENST00000589475 SENP3Q9H4L4 574 aaPredicted RBP13.15□□□□□ -0.3
EFTUD2-213ENST00000589475 NISCHQ9Y2I1 1504 aa12.72□□□□□ -0.37
EFTUD2-213ENST00000589475 FOXD1Q16676 465 aa12.24□□□□□ -0.45
EFTUD2-213ENST00000589475 PLPPR3Q6T4P5 718 aa12.23□□□□□ -0.45
EFTUD2-213ENST00000589475 PPP6R1Q9UPN7 881 aa11.77□□□□□ -0.53
EFTUD2-213ENST00000589475 ADRA2BP18089 450 aa11.74□□□□□ -0.53
EFTUD2-213ENST00000589475 PIAS4Q8N2W9 510 aaPredicted RBP11.51□□□□□ -0.57
EFTUD2-213ENST00000589475 MSH5O43196 834 aa11.26□□□□□ -0.61
EFTUD2-213ENST00000589475 CCDC180Q9P1Z9 1646 aa11.25□□□□□ -0.61
EFTUD2-213ENST00000589475 PPP4R3CPQ6ZMV5 832 aa10.79□□□□□ -0.68
EFTUD2-213ENST00000589475 ABCC9O60706 1549 aa10.7□□□□□ -0.7
EFTUD2-213ENST00000589475 SCAF1Q9H7N4 1312 aaKnown RBP10.68□□□□□ -0.7
EFTUD2-213ENST00000589475 MAPK8IP2Q13387 824 aaPredicted RBP10.67□□□□□ -0.7
EFTUD2-213ENST00000589475 ZCCHC6Q5VYS8 1495 aaKnown RBP10.67□□□□□ -0.7
EFTUD2-213ENST00000589475 DCAF1Q9Y4B6 1507 aa10.59□□□□□ -0.71
EFTUD2-213ENST00000589475 MYO15BQ96JP2 1530 aa10.56□□□□□ -0.72
EFTUD2-213ENST00000589475 NACADO15069 1562 aa10.52□□□□□ -0.73
EFTUD2-213ENST00000589475 KCNA4P22459 653 aa10.51□□□□□ -0.73
EFTUD2-213ENST00000589475 DMRT2Q9Y5R5 561 aa10.51□□□□□ -0.73
EFTUD2-213ENST00000589475 DCAF8L2P0C7V8 631 aa10.48□□□□□ -0.73
EFTUD2-213ENST00000589475 CNKSR2Q8WXI2 1034 aa10.48□□□□□ -0.73
EFTUD2-213ENST00000589475 RB1CC1Q8TDY2 1594 aa10.47□□□□□ -0.73
EFTUD2-213ENST00000589475 NCBP3Q53F19 620 aaKnown RBP10.46□□□□□ -0.73
EFTUD2-213ENST00000589475 POTEDQ86YR6 584 aa10.36□□□□□ -0.75
EFTUD2-213ENST00000589475 NPM3O75607 178 aaKnown RBP10.35□□□□□ -0.75
EFTUD2-213ENST00000589475 RNF216Q9NWF9 866 aaPredicted RBP10.29□□□□□ -0.76
EFTUD2-213ENST00000589475 HOXD11P31277 338 aaPredicted RBP10.28□□□□□ -0.76
EFTUD2-213ENST00000589475 SCRIBQ14160 1630 aa10.22□□□□□ -0.77
EFTUD2-213ENST00000589475 UNC13AQ9UPW8 1703 aa10.16□□□□□ -0.78
EFTUD2-213ENST00000589475 SHROOM4Q9ULL8 1493 aa10.13□□□□□ -0.79
EFTUD2-213ENST00000589475 BICRAQ9NZM4 1560 aa10.08□□□□□ -0.8
EFTUD2-213ENST00000589475 DNAJC5BQ9UF47 199 aa10.06□□□□□ -0.8
EFTUD2-213ENST00000589475 DCAF8L1A6NGE4 600 aa10.02□□□□□ -0.81
EFTUD2-213ENST00000589475 PABPN1Q86U42 306 aaKnown RBP eCLIP10.02□□□□□ -0.81
EFTUD2-213ENST00000589475 SLC4A1APQ9BWU0 796 aaKnown RBP9.97□□□□□ -0.81
EFTUD2-213ENST00000589475 BAZ1AQ9NRL2 1556 aaPredicted RBP9.88□□□□□ -0.83
EFTUD2-213ENST00000589475 CECR2Q9BXF3 1484 aa9.84□□□□□ -0.83
EFTUD2-213ENST00000589475 SMARCA4P51532 1647 aa9.82□□□□□ -0.84
EFTUD2-213ENST00000589475 EIF4G1Q04637 1599 aaKnown RBP9.82□□□□□ -0.84
EFTUD2-213ENST00000589475 SLC4A2P04920 1241 aa9.8□□□□□ -0.84
EFTUD2-213ENST00000589475 MROH2BQ7Z745 1585 aa9.78□□□□□ -0.84
EFTUD2-213ENST00000589475 RSF1Q96T23 1441 aaPredicted RBP9.77□□□□□ -0.85
EFTUD2-213ENST00000589475 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.76□□□□□ -0.85
EFTUD2-213ENST00000589475 SMARCA2P51531 1590 aa9.75□□□□□ -0.85
EFTUD2-213ENST00000589475 PEG3Q9GZU2 1588 aa9.75□□□□□ -0.85
EFTUD2-213ENST00000589475 ATAD2BQ9ULI0 1458 aa9.71□□□□□ -0.86
EFTUD2-213ENST00000589475 CC2D2AQ9P2K1 1620 aa9.71□□□□□ -0.86
EFTUD2-213ENST00000589475 ZBTB22O15209 634 aa9.7□□□□□ -0.86
EFTUD2-213ENST00000589475 WIZO95785 1651 aa9.68□□□□□ -0.86
EFTUD2-213ENST00000589475 HMGXB3Q12766 1538 aa9.68□□□□□ -0.86
EFTUD2-213ENST00000589475 NCAPD3P42695 1498 aa9.68□□□□□ -0.86
EFTUD2-213ENST00000589475 RNF39Q9H2S5 420 aa9.68□□□□□ -0.86
EFTUD2-213ENST00000589475 SUPT5HO00267 1087 aaKnown RBP9.67□□□□□ -0.86
EFTUD2-213ENST00000589475 BAZ1BQ9UIG0 1483 aaKnown RBP9.66□□□□□ -0.86
EFTUD2-213ENST00000589475 EHMT2Q96KQ7 1210 aa9.65□□□□□ -0.86
EFTUD2-213ENST00000589475 FOXD4L1Q9NU39 408 aa9.65□□□□□ -0.86
EFTUD2-213ENST00000589475 TOP2AP11388 1531 aaKnown RBP9.65□□□□□ -0.86
EFTUD2-213ENST00000589475 U3KPZ7 1027 aaPredicted RBP9.64□□□□□ -0.87
EFTUD2-213ENST00000589475 CSRNP3Q8WYN3 585 aa9.58□□□□□ -0.88
EFTUD2-213ENST00000589475 MYCNP04198 464 aaPredicted RBP9.54□□□□□ -0.88
EFTUD2-213ENST00000589475 C1QBPQ07021 282 aaKnown RBP9.53□□□□□ -0.88
EFTUD2-213ENST00000589475 CCDC88BA6NC98 1476 aa9.49□□□□□ -0.89
EFTUD2-213ENST00000589475 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.44□□□□□ -0.9
EFTUD2-213ENST00000589475 HNRNPUL2Q1KMD3 747 aaKnown RBP9.44□□□□□ -0.9
EFTUD2-213ENST00000589475 CACNB1Q02641 598 aaPredicted RBP9.42□□□□□ -0.9
EFTUD2-213ENST00000589475 SAMD1Q6SPF0 538 aaPredicted RBP9.42□□□□□ -0.9
EFTUD2-213ENST00000589475 CADPSQ9ULU8 1353 aa9.41□□□□□ -0.9
EFTUD2-213ENST00000589475 LAMC3Q9Y6N6 1575 aa9.41□□□□□ -0.9
EFTUD2-213ENST00000589475 CFTRP13569 1480 aa9.4□□□□□ -0.9
EFTUD2-213ENST00000589475 SPINK5Q9NQ38 1064 aaPredicted RBP9.39□□□□□ -0.91
EFTUD2-213ENST00000589475 PRDM2Q13029 1718 aa9.36□□□□□ -0.91
EFTUD2-213ENST00000589475 PDS5BQ9NTI5 1447 aa9.34□□□□□ -0.91
EFTUD2-213ENST00000589475 APLP2Q06481 763 aa9.34□□□□□ -0.91
EFTUD2-213ENST00000589475 ATF5Q9Y2D1 282 aaPredicted RBP9.34□□□□□ -0.91
EFTUD2-213ENST00000589475 ATXN8OSP0DMR3 200 aa9.33□□□□□ -0.92
EFTUD2-213ENST00000589475 NESP48681 1621 aa9.31□□□□□ -0.92
EFTUD2-213ENST00000589475 CAPN15O75808 1086 aa9.31□□□□□ -0.92
EFTUD2-213ENST00000589475 FANCD2Q9BXW9 1451 aa9.3□□□□□ -0.92
EFTUD2-213ENST00000589475 CEP164Q9UPV0 1460 aa9.28□□□□□ -0.92
EFTUD2-213ENST00000589475 TRHP20396 242 aaPredicted RBP9.27□□□□□ -0.93
EFTUD2-213ENST00000589475 ERCC6Q03468 1493 aa9.26□□□□□ -0.93
EFTUD2-213ENST00000589475 ZNF219Q9P2Y4 722 aaPredicted RBP9.24□□□□□ -0.93
EFTUD2-213ENST00000589475 ABCC8Q09428 1581 aa9.24□□□□□ -0.93
EFTUD2-213ENST00000589475 WRNQ14191 1432 aaPredicted RBP eCLIP9.23□□□□□ -0.93
EFTUD2-213ENST00000589475 KIF21AQ7Z4S6 1674 aa9.23□□□□□ -0.93
EFTUD2-213ENST00000589475 MRC2Q9UBG0 1479 aa9.21□□□□□ -0.93
EFTUD2-213ENST00000589475 DNMBPQ6XZF7 1577 aa9.2□□□□□ -0.94
EFTUD2-213ENST00000589475 DSG3P32926 999 aa9.19□□□□□ -0.94
EFTUD2-213ENST00000589475 TOP2BQ02880 1626 aa9.19□□□□□ -0.94
EFTUD2-213ENST00000589475 BIVM-ERCC5R4GMW8 1640 aa9.18□□□□□ -0.94
EFTUD2-213ENST00000589475 WDR62O43379 1518 aa9.17□□□□□ -0.94
EFTUD2-213ENST00000589475 CUX1P39880 1505 aa9.17□□□□□ -0.94
EFTUD2-213ENST00000589475 TOPBP1Q92547 1522 aa9.17□□□□□ -0.94
EFTUD2-213ENST00000589475 THOC2Q8NI27 1593 aaKnown RBP9.16□□□□□ -0.94
EFTUD2-213ENST00000589475 URB2Q14146 1524 aaKnown RBP9.16□□□□□ -0.94
EFTUD2-213ENST00000589475 TRIM41Q8WV44 630 aa9.16□□□□□ -0.94
EFTUD2-213ENST00000589475 SYNJ1O43426 1573 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 136.9 ms