RNA–Protein interactions for RNA: ENST00000588621.5

MARK4-205, Transcript of microtubule affinity regulating kinase 4, humanhuman

TSL 2

Gene MARK4, Length 2,024 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK4-205ENST00000588621 NISCHQ9Y2I1 1504 aa42.53■■■■■ 4.4
MARK4-205ENST00000588621 CCDC180Q9P1Z9 1646 aa37.07■■■■□ 3.52
MARK4-205ENST00000588621 ZCCHC6Q5VYS8 1495 aaKnown RBP35.77■■■■□ 3.32
MARK4-205ENST00000588621 DCAF1Q9Y4B6 1507 aa35.23■■■■□ 3.23
MARK4-205ENST00000588621 SHROOM4Q9ULL8 1493 aa35.2■■■■□ 3.23
MARK4-205ENST00000588621 DCAF8L2P0C7V8 631 aa34.99■■■■□ 3.19
MARK4-205ENST00000588621 SUPT5HO00267 1087 aaKnown RBP34.84■■■■□ 3.17
MARK4-205ENST00000588621 MYO15BQ96JP2 1530 aa34.74■■■■□ 3.15
MARK4-205ENST00000588621 ABCC9O60706 1549 aa34.7■■■■□ 3.15
MARK4-205ENST00000588621 HRCP23327 699 aa34.63■■■■□ 3.13
MARK4-205ENST00000588621 NACADO15069 1562 aa34.45■■■■□ 3.1
MARK4-205ENST00000588621 CHIC1Q5VXU3 224 aa34.4■■■■□ 3.1
MARK4-205ENST00000588621 RB1CC1Q8TDY2 1594 aa34.09■■■■□ 3.05
MARK4-205ENST00000588621 SCRIBQ14160 1630 aa34.02■■■■□ 3.04
MARK4-205ENST00000588621 PCGF6Q9BYE7 350 aa33.92■■■■□ 3.02
MARK4-205ENST00000588621 PPARGC1BQ86YN6 1023 aaKnown RBP33.58■■■□□ 2.97
MARK4-205ENST00000588621 UNC13AQ9UPW8 1703 aa33.4■■■□□ 2.94
MARK4-205ENST00000588621 TRIM26Q12899 539 aaPredicted RBP33.28■■■□□ 2.92
MARK4-205ENST00000588621 LOC105371045A0A1W2PR82 267 aa33.26■■■□□ 2.91
MARK4-205ENST00000588621 RSF1Q96T23 1441 aaPredicted RBP33.05■■■□□ 2.88
MARK4-205ENST00000588621 BICRAQ9NZM4 1560 aa32.98■■■□□ 2.87
MARK4-205ENST00000588621 ZEB1P37275 1124 aaPredicted RBP32.97■■■□□ 2.87
MARK4-205ENST00000588621 CECR2Q9BXF3 1484 aa32.95■■■□□ 2.87
MARK4-205ENST00000588621 BAZ1AQ9NRL2 1556 aaPredicted RBP32.87■■■□□ 2.85
MARK4-205ENST00000588621 MROH2BQ7Z745 1585 aa32.83■■■□□ 2.85
MARK4-205ENST00000588621 PABPN1Q86U42 306 aaKnown RBP eCLIP32.73■■■□□ 2.83
MARK4-205ENST00000588621 PELP1Q8IZL8 1130 aaKnown RBP32.72■■■□□ 2.83
MARK4-205ENST00000588621 SMARCA4P51532 1647 aa32.66■■■□□ 2.82
MARK4-205ENST00000588621 WIZO95785 1651 aa32.6■■■□□ 2.81
MARK4-205ENST00000588621 TRIM41Q8WV44 630 aa32.49■■■□□ 2.79
MARK4-205ENST00000588621 TOP2AP11388 1531 aaKnown RBP32.3■■■□□ 2.76
MARK4-205ENST00000588621 SCAF1Q9H7N4 1312 aaKnown RBP32.29■■■□□ 2.76
MARK4-205ENST00000588621 PEG3Q9GZU2 1588 aa32.28■■■□□ 2.76
MARK4-205ENST00000588621 FAM9AQ8IZU1 332 aaPredicted RBP32.11■■■□□ 2.73
MARK4-205ENST00000588621 SMARCA2P51531 1590 aa32.09■■■□□ 2.73
MARK4-205ENST00000588621 ATAD2BQ9ULI0 1458 aa32.03■■■□□ 2.72
MARK4-205ENST00000588621 EIF4G1Q04637 1599 aaKnown RBP31.99■■■□□ 2.71
MARK4-205ENST00000588621 CCDC88BA6NC98 1476 aa31.93■■■□□ 2.7
MARK4-205ENST00000588621 BAZ1BQ9UIG0 1483 aaKnown RBP31.9■■■□□ 2.7
MARK4-205ENST00000588621 ACIN1Q9UKV3 1341 aaKnown RBP31.8■■■□□ 2.68
MARK4-205ENST00000588621 HMGXB3Q12766 1538 aa31.75■■■□□ 2.67
MARK4-205ENST00000588621 NCAPD3P42695 1498 aa31.75■■■□□ 2.67
MARK4-205ENST00000588621 EHMT2Q96KQ7 1210 aa31.68■■■□□ 2.66
MARK4-205ENST00000588621 WRNQ14191 1432 aaPredicted RBP eCLIP31.66■■■□□ 2.66
MARK4-205ENST00000588621 CCER1Q8TC90 406 aaPredicted RBP31.66■■■□□ 2.66
MARK4-205ENST00000588621 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.64■■■□□ 2.66
MARK4-205ENST00000588621 NEUROD1Q13562 356 aa31.59■■■□□ 2.65
MARK4-205ENST00000588621 CENPBP07199 599 aaPredicted RBP31.5■■■□□ 2.63
MARK4-205ENST00000588621 DIEXFQ68CQ4 756 aaKnown RBP31.49■■■□□ 2.63
MARK4-205ENST00000588621 CC2D2AQ9P2K1 1620 aa31.46■■■□□ 2.63
MARK4-205ENST00000588621 MYT1Q01538 1121 aa31.36■■■□□ 2.61
MARK4-205ENST00000588621 CEP162Q5TB80 1403 aa31.36■■■□□ 2.61
MARK4-205ENST00000588621 GTF3C3Q9Y5Q9 886 aa31.34■■■□□ 2.61
MARK4-205ENST00000588621 ABCC8Q09428 1581 aa31.32■■■□□ 2.6
MARK4-205ENST00000588621 TNIKQ9UKE5 1360 aa31.31■■■□□ 2.6
MARK4-205ENST00000588621 EEA1Q15075 1411 aa31.25■■■□□ 2.59
MARK4-205ENST00000588621 ZNF316A6NFI3 1004 aaPredicted RBP31.13■■■□□ 2.57
MARK4-205ENST00000588621 CFTRP13569 1480 aa31.1■■■□□ 2.57
MARK4-205ENST00000588621 SOGA1O94964 1423 aa31.09■■■□□ 2.57
MARK4-205ENST00000588621 PRDM2Q13029 1718 aa31.07■■■□□ 2.56
MARK4-205ENST00000588621 GOLGA3Q08378 1498 aa31.01■■■□□ 2.55
MARK4-205ENST00000588621 CSRNP3Q8WYN3 585 aa30.98■■■□□ 2.55
MARK4-205ENST00000588621 SYNJ1O43426 1573 aa30.97■■■□□ 2.55
MARK4-205ENST00000588621 CADPSQ9ULU8 1353 aa30.94■■■□□ 2.54
MARK4-205ENST00000588621 TTBK1Q5TCY1 1321 aaPredicted RBP30.91■■■□□ 2.54
MARK4-205ENST00000588621 RUSC2Q8N2Y8 1516 aa30.89■■■□□ 2.54
MARK4-205ENST00000588621 TOP2BQ02880 1626 aa30.89■■■□□ 2.53
MARK4-205ENST00000588621 BIVM-ERCC5R4GMW8 1640 aa30.87■■■□□ 2.53
MARK4-205ENST00000588621 KIF21BO75037 1637 aa30.81■■■□□ 2.52
MARK4-205ENST00000588621 UBTFP17480 764 aaKnown RBP30.8■■■□□ 2.52
MARK4-205ENST00000588621 CEP164Q9UPV0 1460 aa30.76■■■□□ 2.51
MARK4-205ENST00000588621 CUX1P39880 1505 aa30.7■■■□□ 2.5
MARK4-205ENST00000588621 MIER1Q8N108 512 aa30.69■■■□□ 2.5
MARK4-205ENST00000588621 LAMC3Q9Y6N6 1575 aa30.68■■■□□ 2.5
MARK4-205ENST00000588621 VPS8Q8N3P4 1428 aa30.64■■■□□ 2.49
MARK4-205ENST00000588621 YTHDC1Q96MU7 727 aaKnown RBP30.63■■■□□ 2.49
MARK4-205ENST00000588621 CLIP1P30622 1438 aa30.61■■■□□ 2.49
MARK4-205ENST00000588621 FANCD2Q9BXW9 1451 aa30.6■■■□□ 2.49
MARK4-205ENST00000588621 HNRNPUL2Q1KMD3 747 aaKnown RBP30.52■■■□□ 2.48
MARK4-205ENST00000588621 NESP48681 1621 aa30.52■■■□□ 2.48
MARK4-205ENST00000588621 CLSPNQ9HAW4 1339 aa30.47■■■□□ 2.47
MARK4-205ENST00000588621 DNAJC5BQ9UF47 199 aa30.42■■■□□ 2.46
MARK4-205ENST00000588621 PDS5BQ9NTI5 1447 aa30.41■■■□□ 2.46
MARK4-205ENST00000588621 DNMBPQ6XZF7 1577 aa30.4■■■□□ 2.46
MARK4-205ENST00000588621 KIF27Q86VH2 1401 aa30.35■■■□□ 2.45
MARK4-205ENST00000588621 RAPGEF2Q9Y4G8 1499 aa30.34■■■□□ 2.45
MARK4-205ENST00000588621 FGD5Q6ZNL6 1462 aa30.33■■■□□ 2.45
MARK4-205ENST00000588621 APLP2Q06481 763 aa30.32■■■□□ 2.44
MARK4-205ENST00000588621 TOPBP1Q92547 1522 aa30.29■■■□□ 2.44
MARK4-205ENST00000588621 DHX57Q6P158 1386 aaKnown RBP30.26■■■□□ 2.43
MARK4-205ENST00000588621 KIF21AQ7Z4S6 1674 aa30.24■■■□□ 2.43
MARK4-205ENST00000588621 ERICH3Q5RHP9 1530 aa30.21■■■□□ 2.43
MARK4-205ENST00000588621 CUX2O14529 1486 aa30.18■■■□□ 2.42
MARK4-205ENST00000588621 PRXQ9BXM0 1461 aa30.17■■■□□ 2.42
MARK4-205ENST00000588621 URB2Q14146 1524 aaKnown RBP30.17■■■□□ 2.42
MARK4-205ENST00000588621 POLA1P09884 1462 aaPredicted RBP30.15■■■□□ 2.42
MARK4-205ENST00000588621 ABCA10Q8WWZ4 1543 aa30.1■■■□□ 2.41
MARK4-205ENST00000588621 ARAP1Q96P48 1450 aa30.1■■■□□ 2.41
MARK4-205ENST00000588621 SUPT16HQ9Y5B9 1047 aaKnown RBP30.1■■■□□ 2.41
MARK4-205ENST00000588621 RRBP1Q9P2E9 1410 aaKnown RBP30.07■■■□□ 2.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms