RNA–Protein interactions for RNA: ENST00000587921.1

ZNF235-202, Transcript of zinc finger protein 235, humanhuman

Gene ZNF235, Length 4,219 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF235-202ENST00000587921 NISCHQ9Y2I1 1504 aa12□□□□□ -0.49
ZNF235-202ENST00000587921 DCAF8L2P0C7V8 631 aa10.82□□□□□ -0.68
ZNF235-202ENST00000587921 DNAJC5Q9H3Z4 198 aa10.6□□□□□ -0.71
ZNF235-202ENST00000587921 AEBP2Q6ZN18 517 aaPredicted RBP10.6□□□□□ -0.71
ZNF235-202ENST00000587921 SHROOM4Q9ULL8 1493 aa10.41□□□□□ -0.74
ZNF235-202ENST00000587921 CCDC180Q9P1Z9 1646 aa10.24□□□□□ -0.77
ZNF235-202ENST00000587921 ABCC9O60706 1549 aa10.22□□□□□ -0.77
ZNF235-202ENST00000587921 SUPT5HO00267 1087 aaKnown RBP10.15□□□□□ -0.79
ZNF235-202ENST00000587921 TRIM41Q8WV44 630 aa10.09□□□□□ -0.79
ZNF235-202ENST00000587921 ZCCHC6Q5VYS8 1495 aaKnown RBP10.01□□□□□ -0.81
ZNF235-202ENST00000587921 PABPN1Q86U42 306 aaKnown RBP eCLIP9.82□□□□□ -0.84
ZNF235-202ENST00000587921 SCRIBQ14160 1630 aa9.78□□□□□ -0.84
ZNF235-202ENST00000587921 DNAJC5BQ9UF47 199 aa9.77□□□□□ -0.84
ZNF235-202ENST00000587921 RB1CC1Q8TDY2 1594 aa9.72□□□□□ -0.85
ZNF235-202ENST00000587921 NACADO15069 1562 aa9.71□□□□□ -0.85
ZNF235-202ENST00000587921 DCAF1Q9Y4B6 1507 aa9.71□□□□□ -0.86
ZNF235-202ENST00000587921 TRHP20396 242 aaPredicted RBP9.62□□□□□ -0.87
ZNF235-202ENST00000587921 MYO15BQ96JP2 1530 aa9.56□□□□□ -0.88
ZNF235-202ENST00000587921 EHMT2Q96KQ7 1210 aa9.5□□□□□ -0.89
ZNF235-202ENST00000587921 FAM9AQ8IZU1 332 aaPredicted RBP9.46□□□□□ -0.89
ZNF235-202ENST00000587921 CECR2Q9BXF3 1484 aa9.43□□□□□ -0.9
ZNF235-202ENST00000587921 RSF1Q96T23 1441 aaPredicted RBP9.41□□□□□ -0.9
ZNF235-202ENST00000587921 CUX2O14529 1486 aa9.4□□□□□ -0.9
ZNF235-202ENST00000587921 CHIC1Q5VXU3 224 aa9.38□□□□□ -0.91
ZNF235-202ENST00000587921 ERCC6Q03468 1493 aa9.36□□□□□ -0.91
ZNF235-202ENST00000587921 ILDR1Q86SU0 546 aaPredicted RBP9.35□□□□□ -0.91
ZNF235-202ENST00000587921 BAZ1AQ9NRL2 1556 aaPredicted RBP9.32□□□□□ -0.92
ZNF235-202ENST00000587921 MROH2BQ7Z745 1585 aa9.32□□□□□ -0.92
ZNF235-202ENST00000587921 UNC13AQ9UPW8 1703 aa9.27□□□□□ -0.93
ZNF235-202ENST00000587921 BAZ1BQ9UIG0 1483 aaKnown RBP9.23□□□□□ -0.93
ZNF235-202ENST00000587921 OSCARQ8IYS5 282 aa9.23□□□□□ -0.93
ZNF235-202ENST00000587921 WIZO95785 1651 aa9.21□□□□□ -0.94
ZNF235-202ENST00000587921 RANGAP1P46060 587 aaPredicted RBP9.2□□□□□ -0.94
ZNF235-202ENST00000587921 SOCS7O14512 581 aa9.19□□□□□ -0.94
ZNF235-202ENST00000587921 LOC105371045A0A1W2PR82 267 aa9.19□□□□□ -0.94
ZNF235-202ENST00000587921 SMARCA4P51532 1647 aa9.18□□□□□ -0.94
ZNF235-202ENST00000587921 BICRAQ9NZM4 1560 aa9.18□□□□□ -0.94
ZNF235-202ENST00000587921 UBTFP17480 764 aaKnown RBP9.17□□□□□ -0.94
ZNF235-202ENST00000587921 LMTK3Q96Q04 1460 aa9.15□□□□□ -0.94
ZNF235-202ENST00000587921 FOXD1Q16676 465 aa9.14□□□□□ -0.95
ZNF235-202ENST00000587921 ATAD2BQ9ULI0 1458 aa9.13□□□□□ -0.95
ZNF235-202ENST00000587921 SMARCA2P51531 1590 aa9.13□□□□□ -0.95
ZNF235-202ENST00000587921 FBXO41Q8TF61 875 aa9.12□□□□□ -0.95
ZNF235-202ENST00000587921 CCDC88BA6NC98 1476 aa9.11□□□□□ -0.95
ZNF235-202ENST00000587921 TOP2AP11388 1531 aaKnown RBP9.1□□□□□ -0.95
ZNF235-202ENST00000587921 EIF4G1Q04637 1599 aaKnown RBP9.09□□□□□ -0.95
ZNF235-202ENST00000587921 TTBK1Q5TCY1 1321 aaPredicted RBP9.09□□□□□ -0.95
ZNF235-202ENST00000587921 DISP3Q9P2K9 1392 aa9.04□□□□□ -0.96
ZNF235-202ENST00000587921 APLP2Q06481 763 aa9.04□□□□□ -0.96
ZNF235-202ENST00000587921 WRNQ14191 1432 aaPredicted RBP eCLIP9□□□□□ -0.97
ZNF235-202ENST00000587921 ATP1B4Q9UN42 357 aaPredicted RBP9□□□□□ -0.97
ZNF235-202ENST00000587921 CSRNP3Q8WYN3 585 aa8.99□□□□□ -0.97
ZNF235-202ENST00000587921 NCAPD3P42695 1498 aa8.99□□□□□ -0.97
ZNF235-202ENST00000587921 PPARGC1BQ86YN6 1023 aaKnown RBP8.99□□□□□ -0.97
ZNF235-202ENST00000587921 ABCC8Q09428 1581 aa8.98□□□□□ -0.97
ZNF235-202ENST00000587921 CC2D2AQ9P2K1 1620 aa8.97□□□□□ -0.97
ZNF235-202ENST00000587921 PCGF6Q9BYE7 350 aa8.95□□□□□ -0.98
ZNF235-202ENST00000587921 CADPSQ9ULU8 1353 aa8.94□□□□□ -0.98
ZNF235-202ENST00000587921 FBLN2P98095 1184 aa8.91□□□□□ -0.98
ZNF235-202ENST00000587921 HMGXB3Q12766 1538 aa8.9□□□□□ -0.99
ZNF235-202ENST00000587921 CYB5RLQ6IPT4 315 aa8.89□□□□□ -0.99
ZNF235-202ENST00000587921 SOGA1O94964 1423 aa8.87□□□□□ -0.99
ZNF235-202ENST00000587921 PEG3Q9GZU2 1588 aa8.87□□□□□ -0.99
ZNF235-202ENST00000587921 PDS5BQ9NTI5 1447 aa8.87□□□□□ -0.99
ZNF235-202ENST00000587921 NPM1P06748 294 aaKnown RBP eCLIP8.86□□□□□ -0.99
ZNF235-202ENST00000587921 FANCD2Q9BXW9 1451 aa8.84□□□□□ -0.99
ZNF235-202ENST00000587921 NESP48681 1621 aa8.83□□□□□ -1
ZNF235-202ENST00000587921 P3H3Q8IVL6 736 aa8.83□□□□□ -1
ZNF235-202ENST00000587921 KIF27Q86VH2 1401 aa8.82□□□□□ -1
ZNF235-202ENST00000587921 EEA1Q15075 1411 aa8.82□□□□□ -1
ZNF235-202ENST00000587921 CFTRP13569 1480 aa8.81□□□□□ -1
ZNF235-202ENST00000587921 CEP164Q9UPV0 1460 aa8.81□□□□□ -1
ZNF235-202ENST00000587921 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.8□□□□□ -1
ZNF235-202ENST00000587921 HNRNPUL2Q1KMD3 747 aaKnown RBP8.8□□□□□ -1
ZNF235-202ENST00000587921 PHF23Q9BUL5 403 aaPredicted RBP8.79□□□□□ -1
ZNF235-202ENST00000587921 TRIM26Q12899 539 aaPredicted RBP8.77□□□□□ -1.01
ZNF235-202ENST00000587921 RUSC2Q8N2Y8 1516 aa8.77□□□□□ -1.01
ZNF235-202ENST00000587921 TDRD9Q8NDG6 1382 aaKnown RBP8.77□□□□□ -1.01
ZNF235-202ENST00000587921 GOLGA3Q08378 1498 aa8.76□□□□□ -1.01
ZNF235-202ENST00000587921 CHMP7Q8WUX9 453 aaPredicted RBP8.75□□□□□ -1.01
ZNF235-202ENST00000587921 DCAF8L1A6NGE4 600 aa8.74□□□□□ -1.01
ZNF235-202ENST00000587921 ARID3CA6NKF2 412 aa8.74□□□□□ -1.01
ZNF235-202ENST00000587921 SYNJ1O43426 1573 aa8.73□□□□□ -1.01
ZNF235-202ENST00000587921 FGD5Q6ZNL6 1462 aa8.73□□□□□ -1.01
ZNF235-202ENST00000587921 ITGAEP38570 1179 aa8.72□□□□□ -1.01
ZNF235-202ENST00000587921 CLIP1P30622 1438 aa8.72□□□□□ -1.01
ZNF235-202ENST00000587921 CEP162Q5TB80 1403 aa8.72□□□□□ -1.01
ZNF235-202ENST00000587921 CARMIL1Q5VZK9 1371 aa8.72□□□□□ -1.01
ZNF235-202ENST00000587921 RAD54L2Q9Y4B4 1467 aa8.71□□□□□ -1.02
ZNF235-202ENST00000587921 TNIKQ9UKE5 1360 aa8.7□□□□□ -1.02
ZNF235-202ENST00000587921 CUX1P39880 1505 aa8.69□□□□□ -1.02
ZNF235-202ENST00000587921 CCER1Q8TC90 406 aaPredicted RBP8.68□□□□□ -1.02
ZNF235-202ENST00000587921 LAMC3Q9Y6N6 1575 aa8.67□□□□□ -1.02
ZNF235-202ENST00000587921 RAPGEF2Q9Y4G8 1499 aa8.66□□□□□ -1.02
ZNF235-202ENST00000587921 TOPBP1Q92547 1522 aa8.66□□□□□ -1.02
ZNF235-202ENST00000587921 TOP2BQ02880 1626 aa8.65□□□□□ -1.02
ZNF235-202ENST00000587921 MRC2Q9UBG0 1479 aa8.63□□□□□ -1.03
ZNF235-202ENST00000587921 POLA1P09884 1462 aaPredicted RBP8.63□□□□□ -1.03
ZNF235-202ENST00000587921 FAM50AQ14320 339 aaKnown RBP8.63□□□□□ -1.03
ZNF235-202ENST00000587921 IGF1RP08069 1367 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 425.6 ms