RNA–Protein interactions for RNA: ENST00000585161.1

CDK12-210, Transcript of cyclin dependent kinase 12, humanhuman

Gene CDK12, Length 2,036 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK12-210ENST00000585161 NISCHQ9Y2I1 1504 aa26.72■■□□□ 1.87
CDK12-210ENST00000585161 PELP1Q8IZL8 1130 aaKnown RBP23.76■■□□□ 1.39
CDK12-210ENST00000585161 CCDC180Q9P1Z9 1646 aa23.67■■□□□ 1.38
CDK12-210ENST00000585161 MYT1Q01538 1121 aa23.43■■□□□ 1.34
CDK12-210ENST00000585161 ABCC9O60706 1549 aa22.97■■□□□ 1.27
CDK12-210ENST00000585161 TTBK1Q5TCY1 1321 aaPredicted RBP22.57■■□□□ 1.2
CDK12-210ENST00000585161 ZCCHC6Q5VYS8 1495 aaKnown RBP22.31■■□□□ 1.16
CDK12-210ENST00000585161 NACADO15069 1562 aa22.21■■□□□ 1.15
CDK12-210ENST00000585161 RB1CC1Q8TDY2 1594 aa22.18■■□□□ 1.14
CDK12-210ENST00000585161 MYO15BQ96JP2 1530 aa22.17■■□□□ 1.14
CDK12-210ENST00000585161 DCAF8L2P0C7V8 631 aa22.13■■□□□ 1.13
CDK12-210ENST00000585161 DCAF1Q9Y4B6 1507 aa22.13■■□□□ 1.13
CDK12-210ENST00000585161 HRCP23327 699 aa22.06■■□□□ 1.12
CDK12-210ENST00000585161 AEBP2Q6ZN18 517 aaPredicted RBP21.86■■□□□ 1.09
CDK12-210ENST00000585161 CHIC1Q5VXU3 224 aa21.85■■□□□ 1.09
CDK12-210ENST00000585161 UNC13AQ9UPW8 1703 aa21.7■■□□□ 1.06
CDK12-210ENST00000585161 SCRIBQ14160 1630 aa21.6■■□□□ 1.05
CDK12-210ENST00000585161 BICRAQ9NZM4 1560 aa21.56■■□□□ 1.04
CDK12-210ENST00000585161 PABPN1Q86U42 306 aaKnown RBP eCLIP21.48■■□□□ 1.03
CDK12-210ENST00000585161 SCAF1Q9H7N4 1312 aaKnown RBP21.45■■□□□ 1.02
CDK12-210ENST00000585161 PRKCSHP14314 528 aaPredicted RBP21.45■■□□□ 1.02
CDK12-210ENST00000585161 DNAJC5BQ9UF47 199 aa21.36■■□□□ 1.01
CDK12-210ENST00000585161 SHROOM4Q9ULL8 1493 aa21.33■■□□□ 1.01
CDK12-210ENST00000585161 ERICH6Q7L0X2 663 aa21.32■■□□□ 1
CDK12-210ENST00000585161 APLP2Q06481 763 aa21.18■□□□□ 0.98
CDK12-210ENST00000585161 BCL11AQ9H165 835 aa21.13■□□□□ 0.97
CDK12-210ENST00000585161 PPARGC1BQ86YN6 1023 aaKnown RBP21.05■□□□□ 0.96
CDK12-210ENST00000585161 EIF4G1Q04637 1599 aaKnown RBP20.94■□□□□ 0.94
CDK12-210ENST00000585161 FAM9AQ8IZU1 332 aaPredicted RBP20.81■□□□□ 0.92
CDK12-210ENST00000585161 CC2D2AQ9P2K1 1620 aa20.8■□□□□ 0.92
CDK12-210ENST00000585161 CENPBP07199 599 aaPredicted RBP20.8■□□□□ 0.92
CDK12-210ENST00000585161 CECR2Q9BXF3 1484 aa20.8■□□□□ 0.92
CDK12-210ENST00000585161 SMARCA4P51532 1647 aa20.69■□□□□ 0.9
CDK12-210ENST00000585161 SLC24A1O60721 1099 aa20.69■□□□□ 0.9
CDK12-210ENST00000585161 BAZ1AQ9NRL2 1556 aaPredicted RBP20.68■□□□□ 0.9
CDK12-210ENST00000585161 ACIN1Q9UKV3 1341 aaKnown RBP20.65■□□□□ 0.9
CDK12-210ENST00000585161 MROH2BQ7Z745 1585 aa20.6■□□□□ 0.89
CDK12-210ENST00000585161 PCGF6Q9BYE7 350 aa20.58■□□□□ 0.88
CDK12-210ENST00000585161 ATAD2BQ9ULI0 1458 aa20.53■□□□□ 0.88
CDK12-210ENST00000585161 PEG3Q9GZU2 1588 aa20.52■□□□□ 0.87
CDK12-210ENST00000585161 ZEB1P37275 1124 aaPredicted RBP20.51■□□□□ 0.87
CDK12-210ENST00000585161 SMARCA2P51531 1590 aa20.51■□□□□ 0.87
CDK12-210ENST00000585161 NCAPD3P42695 1498 aa20.5■□□□□ 0.87
CDK12-210ENST00000585161 HMGXB3Q12766 1538 aa20.42■□□□□ 0.86
CDK12-210ENST00000585161 RSF1Q96T23 1441 aaPredicted RBP20.42■□□□□ 0.86
CDK12-210ENST00000585161 GTF3C3Q9Y5Q9 886 aa20.38■□□□□ 0.85
CDK12-210ENST00000585161 WIZO95785 1651 aa20.37■□□□□ 0.85
CDK12-210ENST00000585161 BAZ1BQ9UIG0 1483 aaKnown RBP20.36■□□□□ 0.85
CDK12-210ENST00000585161 NEUROD1Q13562 356 aa20.34■□□□□ 0.85
CDK12-210ENST00000585161 ANP32EQ9BTT0 268 aa20.32■□□□□ 0.84
CDK12-210ENST00000585161 TOP2AP11388 1531 aaKnown RBP20.17■□□□□ 0.82
CDK12-210ENST00000585161 DAXXQ9UER7 740 aaPredicted RBP20.12■□□□□ 0.81
CDK12-210ENST00000585161 NESP48681 1621 aa19.95■□□□□ 0.78
CDK12-210ENST00000585161 SUPT5HO00267 1087 aaKnown RBP19.95■□□□□ 0.78
CDK12-210ENST00000585161 CSRNP3Q8WYN3 585 aa19.93■□□□□ 0.78
CDK12-210ENST00000585161 CCDC88BA6NC98 1476 aa19.93■□□□□ 0.78
CDK12-210ENST00000585161 LAMC3Q9Y6N6 1575 aa19.92■□□□□ 0.78
CDK12-210ENST00000585161 TRIM26Q12899 539 aaPredicted RBP19.91■□□□□ 0.78
CDK12-210ENST00000585161 CADPSQ9ULU8 1353 aa19.89■□□□□ 0.77
CDK12-210ENST00000585161 CFTRP13569 1480 aa19.84■□□□□ 0.77
CDK12-210ENST00000585161 EIF5BO60841 1220 aaKnown RBP19.81■□□□□ 0.76
CDK12-210ENST00000585161 ERCC6Q03468 1493 aa19.76■□□□□ 0.75
CDK12-210ENST00000585161 PDS5BQ9NTI5 1447 aa19.76■□□□□ 0.75
CDK12-210ENST00000585161 UBE2Q2Q8WVN8 375 aa19.75■□□□□ 0.75
CDK12-210ENST00000585161 KIF21AQ7Z4S6 1674 aa19.72■□□□□ 0.75
CDK12-210ENST00000585161 PRDM2Q13029 1718 aa19.68■□□□□ 0.74
CDK12-210ENST00000585161 FANCD2Q9BXW9 1451 aa19.67■□□□□ 0.74
CDK12-210ENST00000585161 CLSPNQ9HAW4 1339 aa19.67■□□□□ 0.74
CDK12-210ENST00000585161 THOC2Q8NI27 1593 aaKnown RBP19.63■□□□□ 0.73
CDK12-210ENST00000585161 CEP164Q9UPV0 1460 aa19.62■□□□□ 0.73
CDK12-210ENST00000585161 MRC2Q9UBG0 1479 aa19.57■□□□□ 0.72
CDK12-210ENST00000585161 CUX2O14529 1486 aa19.55■□□□□ 0.72
CDK12-210ENST00000585161 WDR62O43379 1518 aa19.52■□□□□ 0.72
CDK12-210ENST00000585161 URB2Q14146 1524 aaKnown RBP19.48■□□□□ 0.71
CDK12-210ENST00000585161 ANO8Q9HCE9 1232 aaPredicted RBP19.48■□□□□ 0.71
CDK12-210ENST00000585161 TSHZ2Q9NRE2 1034 aa19.47■□□□□ 0.71
CDK12-210ENST00000585161 DIEXFQ68CQ4 756 aaKnown RBP19.46■□□□□ 0.71
CDK12-210ENST00000585161 MYT1LQ9UL68 1186 aa19.45■□□□□ 0.7
CDK12-210ENST00000585161 ERICH6BQ5W0A0 696 aa19.41■□□□□ 0.7
CDK12-210ENST00000585161 PHF23Q9BUL5 403 aaPredicted RBP19.41■□□□□ 0.7
CDK12-210ENST00000585161 TOPBP1Q92547 1522 aa19.38■□□□□ 0.69
CDK12-210ENST00000585161 DNMBPQ6XZF7 1577 aa19.37■□□□□ 0.69
CDK12-210ENST00000585161 DNAJC5Q9H3Z4 198 aa19.37■□□□□ 0.69
CDK12-210ENST00000585161 ABCC8Q09428 1581 aa19.36■□□□□ 0.69
CDK12-210ENST00000585161 CUX1P39880 1505 aa19.31■□□□□ 0.68
CDK12-210ENST00000585161 POLA1P09884 1462 aaPredicted RBP19.24■□□□□ 0.67
CDK12-210ENST00000585161 WRNQ14191 1432 aaPredicted RBP eCLIP19.23■□□□□ 0.67
CDK12-210ENST00000585161 FGD5Q6ZNL6 1462 aa19.21■□□□□ 0.67
CDK12-210ENST00000585161 IFT140Q96RY7 1462 aa19.21■□□□□ 0.67
CDK12-210ENST00000585161 SYNJ1O43426 1573 aa19.2■□□□□ 0.66
CDK12-210ENST00000585161 TOP2BQ02880 1626 aa19.19■□□□□ 0.66
CDK12-210ENST00000585161 BIVM-ERCC5R4GMW8 1640 aa19.19■□□□□ 0.66
CDK12-210ENST00000585161 PKNOX2Q96KN3 472 aa19.18■□□□□ 0.66
CDK12-210ENST00000585161 SUPT16HQ9Y5B9 1047 aaKnown RBP19.18■□□□□ 0.66
CDK12-210ENST00000585161 TARBP1Q13395 1621 aaKnown RBP19.18■□□□□ 0.66
CDK12-210ENST00000585161 TRIM41Q8WV44 630 aa19.14■□□□□ 0.65
CDK12-210ENST00000585161 RAD54L2Q9Y4B4 1467 aa19.14■□□□□ 0.65
CDK12-210ENST00000585161 ZNF608Q9ULD9 1512 aaPredicted RBP19.12■□□□□ 0.65
CDK12-210ENST00000585161 SOGA1O94964 1423 aa19.12■□□□□ 0.65
CDK12-210ENST00000585161 SALL2Q9Y467 1007 aaPredicted RBP19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms