RNA–Protein interactions for RNA: ENST00000584335.5

SNX11-213, Transcript of sorting nexin 11, humanhuman

TSL 5

Gene SNX11, Length 922 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-213ENST00000584335 AEBP2Q6ZN18 517 aaPredicted RBP24.21■■□□□ 1.47
SNX11-213ENST00000584335 CHIC1Q5VXU3 224 aa23.47■■□□□ 1.35
SNX11-213ENST00000584335 NISCHQ9Y2I1 1504 aa21.45■■□□□ 1.02
SNX11-213ENST00000584335 PHF23Q9BUL5 403 aaPredicted RBP20.64■□□□□ 0.89
SNX11-213ENST00000584335 SENP3Q9H4L4 574 aaPredicted RBP20.55■□□□□ 0.88
SNX11-213ENST00000584335 FOXD1Q16676 465 aa19.11■□□□□ 0.65
SNX11-213ENST00000584335 PLPPR3Q6T4P5 718 aa19.01■□□□□ 0.63
SNX11-213ENST00000584335 CCDC180Q9P1Z9 1646 aa18.79■□□□□ 0.6
SNX11-213ENST00000584335 ADRA2BP18089 450 aa18.29■□□□□ 0.52
SNX11-213ENST00000584335 PPP6R1Q9UPN7 881 aa18.29■□□□□ 0.52
SNX11-213ENST00000584335 ZCCHC6Q5VYS8 1495 aaKnown RBP18.03■□□□□ 0.48
SNX11-213ENST00000584335 PIAS4Q8N2W9 510 aaPredicted RBP18.01■□□□□ 0.47
SNX11-213ENST00000584335 DCAF1Q9Y4B6 1507 aa17.83■□□□□ 0.45
SNX11-213ENST00000584335 MSH5O43196 834 aa17.66■□□□□ 0.42
SNX11-213ENST00000584335 MYO15BQ96JP2 1530 aa17.63■□□□□ 0.41
SNX11-213ENST00000584335 ABCC9O60706 1549 aa17.6■□□□□ 0.41
SNX11-213ENST00000584335 DCAF8L2P0C7V8 631 aa17.5■□□□□ 0.39
SNX11-213ENST00000584335 NACADO15069 1562 aa17.46■□□□□ 0.39
SNX11-213ENST00000584335 SHROOM4Q9ULL8 1493 aa17.31■□□□□ 0.36
SNX11-213ENST00000584335 RB1CC1Q8TDY2 1594 aa17.3■□□□□ 0.36
SNX11-213ENST00000584335 SCRIBQ14160 1630 aa17.14■□□□□ 0.33
SNX11-213ENST00000584335 UNC13AQ9UPW8 1703 aa16.93■□□□□ 0.3
SNX11-213ENST00000584335 BICRAQ9NZM4 1560 aa16.77■□□□□ 0.27
SNX11-213ENST00000584335 PPP4R3CPQ6ZMV5 832 aa16.74■□□□□ 0.27
SNX11-213ENST00000584335 SCAF1Q9H7N4 1312 aaKnown RBP16.7■□□□□ 0.26
SNX11-213ENST00000584335 SUPT5HO00267 1087 aaKnown RBP16.65■□□□□ 0.26
SNX11-213ENST00000584335 MAPK8IP2Q13387 824 aaPredicted RBP16.64■□□□□ 0.25
SNX11-213ENST00000584335 RSF1Q96T23 1441 aaPredicted RBP16.61■□□□□ 0.25
SNX11-213ENST00000584335 CECR2Q9BXF3 1484 aa16.6■□□□□ 0.25
SNX11-213ENST00000584335 BAZ1AQ9NRL2 1556 aaPredicted RBP16.58■□□□□ 0.24
SNX11-213ENST00000584335 MROH2BQ7Z745 1585 aa16.53■□□□□ 0.24
SNX11-213ENST00000584335 PABPN1Q86U42 306 aaKnown RBP eCLIP16.53■□□□□ 0.24
SNX11-213ENST00000584335 SMARCA4P51532 1647 aa16.49■□□□□ 0.23
SNX11-213ENST00000584335 WIZO95785 1651 aa16.4■□□□□ 0.22
SNX11-213ENST00000584335 DMRT2Q9Y5R5 561 aa16.38■□□□□ 0.21
SNX11-213ENST00000584335 POTEDQ86YR6 584 aa16.36■□□□□ 0.21
SNX11-213ENST00000584335 PEG3Q9GZU2 1588 aa16.35■□□□□ 0.21
SNX11-213ENST00000584335 CNKSR2Q8WXI2 1034 aa16.29■□□□□ 0.2
SNX11-213ENST00000584335 TOP2AP11388 1531 aaKnown RBP16.28■□□□□ 0.2
SNX11-213ENST00000584335 NCBP3Q53F19 620 aaKnown RBP16.26■□□□□ 0.19
SNX11-213ENST00000584335 EIF4G1Q04637 1599 aaKnown RBP16.25■□□□□ 0.19
SNX11-213ENST00000584335 SMARCA2P51531 1590 aa16.24■□□□□ 0.19
SNX11-213ENST00000584335 KCNA4P22459 653 aa16.21■□□□□ 0.19
SNX11-213ENST00000584335 ATAD2BQ9ULI0 1458 aa16.21■□□□□ 0.19
SNX11-213ENST00000584335 HMGXB3Q12766 1538 aa16.11■□□□□ 0.17
SNX11-213ENST00000584335 NCAPD3P42695 1498 aa16.1■□□□□ 0.17
SNX11-213ENST00000584335 BAZ1BQ9UIG0 1483 aaKnown RBP16.1■□□□□ 0.17
SNX11-213ENST00000584335 CCDC88BA6NC98 1476 aa16.06■□□□□ 0.16
SNX11-213ENST00000584335 NPM3O75607 178 aaKnown RBP16.03■□□□□ 0.16
SNX11-213ENST00000584335 RNF216Q9NWF9 866 aaPredicted RBP16■□□□□ 0.15
SNX11-213ENST00000584335 CC2D2AQ9P2K1 1620 aa15.99■□□□□ 0.15
SNX11-213ENST00000584335 HOXD11P31277 338 aaPredicted RBP15.96■□□□□ 0.15
SNX11-213ENST00000584335 DCAF8L1A6NGE4 600 aa15.79■□□□□ 0.12
SNX11-213ENST00000584335 CFTRP13569 1480 aa15.73■□□□□ 0.11
SNX11-213ENST00000584335 TRIM41Q8WV44 630 aa15.71■□□□□ 0.11
SNX11-213ENST00000584335 PRDM2Q13029 1718 aa15.71■□□□□ 0.1
SNX11-213ENST00000584335 ABCC8Q09428 1581 aa15.68■□□□□ 0.1
SNX11-213ENST00000584335 CADPSQ9ULU8 1353 aa15.65■□□□□ 0.1
SNX11-213ENST00000584335 WRNQ14191 1432 aaPredicted RBP eCLIP15.63■□□□□ 0.09
SNX11-213ENST00000584335 DNAJC5BQ9UF47 199 aa15.59■□□□□ 0.09
SNX11-213ENST00000584335 LAMC3Q9Y6N6 1575 aa15.58■□□□□ 0.08
SNX11-213ENST00000584335 SYNJ1O43426 1573 aa15.57■□□□□ 0.08
SNX11-213ENST00000584335 BIVM-ERCC5R4GMW8 1640 aa15.56■□□□□ 0.08
SNX11-213ENST00000584335 TOP2BQ02880 1626 aa15.55■□□□□ 0.08
SNX11-213ENST00000584335 CUX1P39880 1505 aa15.48■□□□□ 0.07
SNX11-213ENST00000584335 FANCD2Q9BXW9 1451 aa15.46■□□□□ 0.07
SNX11-213ENST00000584335 EEA1Q15075 1411 aa15.46■□□□□ 0.07
SNX11-213ENST00000584335 NESP48681 1621 aa15.46■□□□□ 0.06
SNX11-213ENST00000584335 SLC4A1APQ9BWU0 796 aaKnown RBP15.42■□□□□ 0.06
SNX11-213ENST00000584335 PDS5BQ9NTI5 1447 aa15.41■□□□□ 0.06
SNX11-213ENST00000584335 CEP164Q9UPV0 1460 aa15.39■□□□□ 0.05
SNX11-213ENST00000584335 SOGA1O94964 1423 aa15.38■□□□□ 0.05
SNX11-213ENST00000584335 DNMBPQ6XZF7 1577 aa15.37■□□□□ 0.05
SNX11-213ENST00000584335 KIF21AQ7Z4S6 1674 aa15.33■□□□□ 0.04
SNX11-213ENST00000584335 FAM9AQ8IZU1 332 aaPredicted RBP15.33■□□□□ 0.04
SNX11-213ENST00000584335 LOC105371045A0A1W2PR82 267 aa15.32■□□□□ 0.04
SNX11-213ENST00000584335 RUSC2Q8N2Y8 1516 aa15.32■□□□□ 0.04
SNX11-213ENST00000584335 TOPBP1Q92547 1522 aa15.31■□□□□ 0.04
SNX11-213ENST00000584335 FGD5Q6ZNL6 1462 aa15.29■□□□□ 0.04
SNX11-213ENST00000584335 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.29■□□□□ 0.04
SNX11-213ENST00000584335 CSRNP3Q8WYN3 585 aa15.28■□□□□ 0.04
SNX11-213ENST00000584335 URB2Q14146 1524 aaKnown RBP15.27■□□□□ 0.04
SNX11-213ENST00000584335 KIF21BO75037 1637 aa15.26■□□□□ 0.03
SNX11-213ENST00000584335 KIF27Q86VH2 1401 aa15.24■□□□□ 0.03
SNX11-213ENST00000584335 POLA1P09884 1462 aaPredicted RBP15.23■□□□□ 0.03
SNX11-213ENST00000584335 MRC2Q9UBG0 1479 aa15.21■□□□□ 0.03
SNX11-213ENST00000584335 GOLGA3Q08378 1498 aa15.2■□□□□ 0.02
SNX11-213ENST00000584335 ABCA10Q8WWZ4 1543 aa15.2■□□□□ 0.02
SNX11-213ENST00000584335 WDR97A6NE52 1622 aa15.18■□□□□ 0.02
SNX11-213ENST00000584335 CUX2O14529 1486 aa15.17■□□□□ 0.02
SNX11-213ENST00000584335 ERICH3Q5RHP9 1530 aa15.17■□□□□ 0.02
SNX11-213ENST00000584335 PRXQ9BXM0 1461 aa15.16■□□□□ 0.02
SNX11-213ENST00000584335 SLC4A2P04920 1241 aa15.16■□□□□ 0.02
SNX11-213ENST00000584335 WDR62O43379 1518 aa15.16■□□□□ 0.02
SNX11-213ENST00000584335 TNIKQ9UKE5 1360 aa15.15■□□□□ 0.02
SNX11-213ENST00000584335 RAD54L2Q9Y4B4 1467 aa15.13■□□□□ 0.01
SNX11-213ENST00000584335 RNF39Q9H2S5 420 aa15.12■□□□□ 0.01
SNX11-213ENST00000584335 TARBP1Q13395 1621 aaKnown RBP15.12■□□□□ 0.01
SNX11-213ENST00000584335 THOC2Q8NI27 1593 aaKnown RBP15.11■□□□□ 0.01
SNX11-213ENST00000584335 ERCC6Q03468 1493 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 178.2 ms