RNA–Protein interactions for RNA: ENST00000581670.1

MTCL1-216, Transcript of microtubule crosslinking factor 1, humanhuman

Gene MTCL1, Length 2,856 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTCL1-216ENST00000581670 NISCHQ9Y2I1 1504 aa18.39■□□□□ 0.53
MTCL1-216ENST00000581670 CCDC180Q9P1Z9 1646 aa15.71■□□□□ 0.1
MTCL1-216ENST00000581670 SHROOM4Q9ULL8 1493 aa15.55■□□□□ 0.08
MTCL1-216ENST00000581670 ZCCHC6Q5VYS8 1495 aaKnown RBP15.54■□□□□ 0.08
MTCL1-216ENST00000581670 PELP1Q8IZL8 1130 aaKnown RBP15.22■□□□□ 0.03
MTCL1-216ENST00000581670 SUPT5HO00267 1087 aaKnown RBP15.18■□□□□ 0.02
MTCL1-216ENST00000581670 DCAF8L2P0C7V8 631 aa15.15■□□□□ 0.02
MTCL1-216ENST00000581670 DCAF1Q9Y4B6 1507 aa15.1■□□□□ 0.01
MTCL1-216ENST00000581670 MYT1Q01538 1121 aa14.89□□□□□ -0.03
MTCL1-216ENST00000581670 CHIC1Q5VXU3 224 aa14.76□□□□□ -0.05
MTCL1-216ENST00000581670 MYO15BQ96JP2 1530 aa14.74□□□□□ -0.05
MTCL1-216ENST00000581670 SCRIBQ14160 1630 aa14.68□□□□□ -0.06
MTCL1-216ENST00000581670 ABCC9O60706 1549 aa14.66□□□□□ -0.06
MTCL1-216ENST00000581670 NACADO15069 1562 aa14.51□□□□□ -0.09
MTCL1-216ENST00000581670 RSF1Q96T23 1441 aaPredicted RBP14.5□□□□□ -0.09
MTCL1-216ENST00000581670 HRCP23327 699 aa14.39□□□□□ -0.11
MTCL1-216ENST00000581670 RB1CC1Q8TDY2 1594 aa14.37□□□□□ -0.11
MTCL1-216ENST00000581670 CECR2Q9BXF3 1484 aa14.35□□□□□ -0.11
MTCL1-216ENST00000581670 LOC105371045A0A1W2PR82 267 aa14.31□□□□□ -0.12
MTCL1-216ENST00000581670 MROH2BQ7Z745 1585 aa14.3□□□□□ -0.12
MTCL1-216ENST00000581670 TTBK1Q5TCY1 1321 aaPredicted RBP14.25□□□□□ -0.13
MTCL1-216ENST00000581670 WIZO95785 1651 aa14.24□□□□□ -0.13
MTCL1-216ENST00000581670 PCGF6Q9BYE7 350 aa14.17□□□□□ -0.14
MTCL1-216ENST00000581670 UNC13AQ9UPW8 1703 aa14.16□□□□□ -0.14
MTCL1-216ENST00000581670 SCAF1Q9H7N4 1312 aaKnown RBP14.16□□□□□ -0.14
MTCL1-216ENST00000581670 TRIM41Q8WV44 630 aa14.15□□□□□ -0.14
MTCL1-216ENST00000581670 BAZ1AQ9NRL2 1556 aaPredicted RBP14.13□□□□□ -0.15
MTCL1-216ENST00000581670 PPARGC1BQ86YN6 1023 aaKnown RBP14.1□□□□□ -0.15
MTCL1-216ENST00000581670 PRKCSHP14314 528 aaPredicted RBP14.09□□□□□ -0.15
MTCL1-216ENST00000581670 EIF4G1Q04637 1599 aaKnown RBP14.04□□□□□ -0.16
MTCL1-216ENST00000581670 SMARCA4P51532 1647 aa14.04□□□□□ -0.16
MTCL1-216ENST00000581670 FAM9AQ8IZU1 332 aaPredicted RBP14.03□□□□□ -0.16
MTCL1-216ENST00000581670 TOP2AP11388 1531 aaKnown RBP13.99□□□□□ -0.17
MTCL1-216ENST00000581670 BICRAQ9NZM4 1560 aa13.95□□□□□ -0.18
MTCL1-216ENST00000581670 TRIM26Q12899 539 aaPredicted RBP13.93□□□□□ -0.18
MTCL1-216ENST00000581670 SMARCA2P51531 1590 aa13.93□□□□□ -0.18
MTCL1-216ENST00000581670 CCDC88BA6NC98 1476 aa13.92□□□□□ -0.18
MTCL1-216ENST00000581670 EHMT2Q96KQ7 1210 aa13.9□□□□□ -0.18
MTCL1-216ENST00000581670 PABPN1Q86U42 306 aaKnown RBP eCLIP13.89□□□□□ -0.19
MTCL1-216ENST00000581670 BCL11AQ9H165 835 aa13.88□□□□□ -0.19
MTCL1-216ENST00000581670 ABCC8Q09428 1581 aa13.86□□□□□ -0.19
MTCL1-216ENST00000581670 PEG3Q9GZU2 1588 aa13.78□□□□□ -0.2
MTCL1-216ENST00000581670 SOGA1O94964 1423 aa13.7□□□□□ -0.22
MTCL1-216ENST00000581670 ATAD2BQ9ULI0 1458 aa13.67□□□□□ -0.22
MTCL1-216ENST00000581670 ERICH6Q7L0X2 663 aa13.66□□□□□ -0.22
MTCL1-216ENST00000581670 RUSC2Q8N2Y8 1516 aa13.66□□□□□ -0.22
MTCL1-216ENST00000581670 APLP2Q06481 763 aa13.64□□□□□ -0.23
MTCL1-216ENST00000581670 BAZ1BQ9UIG0 1483 aaKnown RBP13.61□□□□□ -0.23
MTCL1-216ENST00000581670 WRNQ14191 1432 aaPredicted RBP eCLIP13.6□□□□□ -0.23
MTCL1-216ENST00000581670 SYNJ1O43426 1573 aa13.6□□□□□ -0.23
MTCL1-216ENST00000581670 EEA1Q15075 1411 aa13.59□□□□□ -0.23
MTCL1-216ENST00000581670 CEP162Q5TB80 1403 aa13.58□□□□□ -0.24
MTCL1-216ENST00000581670 CSRNP3Q8WYN3 585 aa13.57□□□□□ -0.24
MTCL1-216ENST00000581670 TNIKQ9UKE5 1360 aa13.56□□□□□ -0.24
MTCL1-216ENST00000581670 ZEB1P37275 1124 aaPredicted RBP13.55□□□□□ -0.24
MTCL1-216ENST00000581670 CENPBP07199 599 aaPredicted RBP13.5□□□□□ -0.25
MTCL1-216ENST00000581670 GOLGA3Q08378 1498 aa13.5□□□□□ -0.25
MTCL1-216ENST00000581670 ACIN1Q9UKV3 1341 aaKnown RBP13.49□□□□□ -0.25
MTCL1-216ENST00000581670 UBTFP17480 764 aaKnown RBP13.48□□□□□ -0.25
MTCL1-216ENST00000581670 KIF21BO75037 1637 aa13.46□□□□□ -0.25
MTCL1-216ENST00000581670 GTF3C3Q9Y5Q9 886 aa13.45□□□□□ -0.26
MTCL1-216ENST00000581670 CEP164Q9UPV0 1460 aa13.43□□□□□ -0.26
MTCL1-216ENST00000581670 NEUROD1Q13562 356 aa13.43□□□□□ -0.26
MTCL1-216ENST00000581670 TOP2BQ02880 1626 aa13.43□□□□□ -0.26
MTCL1-216ENST00000581670 HMGXB3Q12766 1538 aa13.43□□□□□ -0.26
MTCL1-216ENST00000581670 NCAPD3P42695 1498 aa13.42□□□□□ -0.26
MTCL1-216ENST00000581670 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.4□□□□□ -0.26
MTCL1-216ENST00000581670 BIVM-ERCC5R4GMW8 1640 aa13.4□□□□□ -0.26
MTCL1-216ENST00000581670 RAPGEF2Q9Y4G8 1499 aa13.37□□□□□ -0.27
MTCL1-216ENST00000581670 CLIP1P30622 1438 aa13.33□□□□□ -0.28
MTCL1-216ENST00000581670 CCER1Q8TC90 406 aaPredicted RBP13.33□□□□□ -0.28
MTCL1-216ENST00000581670 CUX1P39880 1505 aa13.32□□□□□ -0.28
MTCL1-216ENST00000581670 DNAJC5Q9H3Z4 198 aa13.3□□□□□ -0.28
MTCL1-216ENST00000581670 CFTRP13569 1480 aa13.29□□□□□ -0.28
MTCL1-216ENST00000581670 VPS8Q8N3P4 1428 aa13.28□□□□□ -0.28
MTCL1-216ENST00000581670 SLC24A1O60721 1099 aa13.27□□□□□ -0.28
MTCL1-216ENST00000581670 PRXQ9BXM0 1461 aa13.25□□□□□ -0.29
MTCL1-216ENST00000581670 PRDM2Q13029 1718 aa13.25□□□□□ -0.29
MTCL1-216ENST00000581670 ERICH3Q5RHP9 1530 aa13.24□□□□□ -0.29
MTCL1-216ENST00000581670 ANP32EQ9BTT0 268 aa13.24□□□□□ -0.29
MTCL1-216ENST00000581670 RANGAP1P46060 587 aaPredicted RBP13.23□□□□□ -0.29
MTCL1-216ENST00000581670 KIF27Q86VH2 1401 aa13.18□□□□□ -0.3
MTCL1-216ENST00000581670 ARAP1Q96P48 1450 aa13.18□□□□□ -0.3
MTCL1-216ENST00000581670 CC2D2AQ9P2K1 1620 aa13.15□□□□□ -0.3
MTCL1-216ENST00000581670 HNRNPUL2Q1KMD3 747 aaKnown RBP13.14□□□□□ -0.31
MTCL1-216ENST00000581670 CADPSQ9ULU8 1353 aa13.13□□□□□ -0.31
MTCL1-216ENST00000581670 CUX2O14529 1486 aa13.08□□□□□ -0.31
MTCL1-216ENST00000581670 FGD5Q6ZNL6 1462 aa13.07□□□□□ -0.32
MTCL1-216ENST00000581670 IGF1RP08069 1367 aa13.06□□□□□ -0.32
MTCL1-216ENST00000581670 ARHGAP35Q9NRY4 1499 aa13.06□□□□□ -0.32
MTCL1-216ENST00000581670 KANK4Q5T7N3 995 aaPredicted RBP13.06□□□□□ -0.32
MTCL1-216ENST00000581670 DIEXFQ68CQ4 756 aaKnown RBP13.03□□□□□ -0.32
MTCL1-216ENST00000581670 FANCD2Q9BXW9 1451 aa13.02□□□□□ -0.32
MTCL1-216ENST00000581670 CARMIL1Q5VZK9 1371 aa12.99□□□□□ -0.33
MTCL1-216ENST00000581670 NESP48681 1621 aa12.98□□□□□ -0.33
MTCL1-216ENST00000581670 ZNF316A6NFI3 1004 aaPredicted RBP12.97□□□□□ -0.33
MTCL1-216ENST00000581670 DNMBPQ6XZF7 1577 aa12.97□□□□□ -0.33
MTCL1-216ENST00000581670 RRBP1Q9P2E9 1410 aaKnown RBP12.96□□□□□ -0.33
MTCL1-216ENST00000581670 RAD54L2Q9Y4B4 1467 aa12.95□□□□□ -0.34
MTCL1-216ENST00000581670 TOPBP1Q92547 1522 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms