RNA–Protein interactions for RNA: ENST00000578377.1

SOCS6-202, Transcript of suppressor of cytokine signaling 6, humanhuman

TSL 3

Gene SOCS6, Length 894 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOCS6-202ENST00000578377 AEBP2Q6ZN18 517 aaPredicted RBP26.22■■□□□ 1.79
SOCS6-202ENST00000578377 CHIC1Q5VXU3 224 aa24.92■■□□□ 1.58
SOCS6-202ENST00000578377 SENP3Q9H4L4 574 aaPredicted RBP22.44■■□□□ 1.18
SOCS6-202ENST00000578377 PHF23Q9BUL5 403 aaPredicted RBP22.09■■□□□ 1.13
SOCS6-202ENST00000578377 FOXD1Q16676 465 aa20.86■□□□□ 0.93
SOCS6-202ENST00000578377 NISCHQ9Y2I1 1504 aa20.66■□□□□ 0.9
SOCS6-202ENST00000578377 PLPPR3Q6T4P5 718 aa19.9■□□□□ 0.78
SOCS6-202ENST00000578377 MSH5O43196 834 aa19.61■□□□□ 0.73
SOCS6-202ENST00000578377 PIAS4Q8N2W9 510 aaPredicted RBP19.45■□□□□ 0.7
SOCS6-202ENST00000578377 PPP6R1Q9UPN7 881 aa19.45■□□□□ 0.7
SOCS6-202ENST00000578377 ABCC9O60706 1549 aa19.42■□□□□ 0.7
SOCS6-202ENST00000578377 ADRA2BP18089 450 aa19.35■□□□□ 0.69
SOCS6-202ENST00000578377 POTEDQ86YR6 584 aa19.12■□□□□ 0.65
SOCS6-202ENST00000578377 DNAJC5BQ9UF47 199 aa18.92■□□□□ 0.62
SOCS6-202ENST00000578377 CCDC180Q9P1Z9 1646 aa18.67■□□□□ 0.58
SOCS6-202ENST00000578377 RB1CC1Q8TDY2 1594 aa18.12■□□□□ 0.49
SOCS6-202ENST00000578377 PABPN1Q86U42 306 aaKnown RBP eCLIP18.07■□□□□ 0.48
SOCS6-202ENST00000578377 NACADO15069 1562 aa17.87■□□□□ 0.45
SOCS6-202ENST00000578377 SCAF1Q9H7N4 1312 aaKnown RBP17.83■□□□□ 0.44
SOCS6-202ENST00000578377 DMRT2Q9Y5R5 561 aa17.79■□□□□ 0.44
SOCS6-202ENST00000578377 DCAF8L2P0C7V8 631 aa17.78■□□□□ 0.44
SOCS6-202ENST00000578377 MAPK8IP2Q13387 824 aaPredicted RBP17.77■□□□□ 0.44
SOCS6-202ENST00000578377 DNAJC5Q9H3Z4 198 aa17.77■□□□□ 0.44
SOCS6-202ENST00000578377 BICRAQ9NZM4 1560 aa17.7■□□□□ 0.42
SOCS6-202ENST00000578377 UNC13AQ9UPW8 1703 aa17.64■□□□□ 0.41
SOCS6-202ENST00000578377 CECR2Q9BXF3 1484 aa17.56■□□□□ 0.4
SOCS6-202ENST00000578377 CC2D2AQ9P2K1 1620 aa17.46■□□□□ 0.39
SOCS6-202ENST00000578377 MYO15BQ96JP2 1530 aa17.45■□□□□ 0.38
SOCS6-202ENST00000578377 PPP4R3CPQ6ZMV5 832 aa17.39■□□□□ 0.37
SOCS6-202ENST00000578377 SHROOM4Q9ULL8 1493 aa17.31■□□□□ 0.36
SOCS6-202ENST00000578377 EIF4G1Q04637 1599 aaKnown RBP17.28■□□□□ 0.36
SOCS6-202ENST00000578377 HOXD11P31277 338 aaPredicted RBP17.15■□□□□ 0.34
SOCS6-202ENST00000578377 CNKSR2Q8WXI2 1034 aa17.13■□□□□ 0.33
SOCS6-202ENST00000578377 SCRIBQ14160 1630 aa17.04■□□□□ 0.32
SOCS6-202ENST00000578377 RNF216Q9NWF9 866 aaPredicted RBP17■□□□□ 0.31
SOCS6-202ENST00000578377 DCAF1Q9Y4B6 1507 aa17■□□□□ 0.31
SOCS6-202ENST00000578377 ZCCHC6Q5VYS8 1495 aaKnown RBP16.97■□□□□ 0.31
SOCS6-202ENST00000578377 CUX2O14529 1486 aa16.93■□□□□ 0.3
SOCS6-202ENST00000578377 DCAF8L1A6NGE4 600 aa16.88■□□□□ 0.29
SOCS6-202ENST00000578377 NCBP3Q53F19 620 aaKnown RBP16.76■□□□□ 0.27
SOCS6-202ENST00000578377 ERCC6Q03468 1493 aa16.75■□□□□ 0.27
SOCS6-202ENST00000578377 CACNB1Q02641 598 aaPredicted RBP16.75■□□□□ 0.27
SOCS6-202ENST00000578377 RNF39Q9H2S5 420 aa16.72■□□□□ 0.27
SOCS6-202ENST00000578377 TRIM41Q8WV44 630 aa16.68■□□□□ 0.26
SOCS6-202ENST00000578377 NCAPD3P42695 1498 aa16.6■□□□□ 0.25
SOCS6-202ENST00000578377 NESP48681 1621 aa16.52■□□□□ 0.24
SOCS6-202ENST00000578377 C1QBPQ07021 282 aaKnown RBP16.5■□□□□ 0.23
SOCS6-202ENST00000578377 NPM3O75607 178 aaKnown RBP16.48■□□□□ 0.23
SOCS6-202ENST00000578377 ATAD2BQ9ULI0 1458 aa16.45■□□□□ 0.22
SOCS6-202ENST00000578377 THOC2Q8NI27 1593 aaKnown RBP16.38■□□□□ 0.21
SOCS6-202ENST00000578377 HMGXB3Q12766 1538 aa16.32■□□□□ 0.2
SOCS6-202ENST00000578377 SMARCA2P51531 1590 aa16.28■□□□□ 0.2
SOCS6-202ENST00000578377 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.23■□□□□ 0.19
SOCS6-202ENST00000578377 LAMC3Q9Y6N6 1575 aa16.21■□□□□ 0.18
SOCS6-202ENST00000578377 BAZ1BQ9UIG0 1483 aaKnown RBP16.2■□□□□ 0.18
SOCS6-202ENST00000578377 PDS5BQ9NTI5 1447 aa16.19■□□□□ 0.18
SOCS6-202ENST00000578377 SMARCA4P51532 1647 aa16.19■□□□□ 0.18
SOCS6-202ENST00000578377 OSCARQ8IYS5 282 aa16.16■□□□□ 0.18
SOCS6-202ENST00000578377 KIF21AQ7Z4S6 1674 aa16.14■□□□□ 0.18
SOCS6-202ENST00000578377 KCNA4P22459 653 aa16.09■□□□□ 0.17
SOCS6-202ENST00000578377 MRC2Q9UBG0 1479 aa16.09■□□□□ 0.17
SOCS6-202ENST00000578377 CADPSQ9ULU8 1353 aa16.07■□□□□ 0.16
SOCS6-202ENST00000578377 PEG3Q9GZU2 1588 aa16.05■□□□□ 0.16
SOCS6-202ENST00000578377 BAZ1AQ9NRL2 1556 aaPredicted RBP16.05■□□□□ 0.16
SOCS6-202ENST00000578377 WDR62O43379 1518 aa16.05■□□□□ 0.16
SOCS6-202ENST00000578377 MROH2BQ7Z745 1585 aa15.94■□□□□ 0.14
SOCS6-202ENST00000578377 U3KPZ7 1027 aaPredicted RBP15.92■□□□□ 0.14
SOCS6-202ENST00000578377 RIMBP3CA6NJZ7 1639 aa15.9■□□□□ 0.14
SOCS6-202ENST00000578377 RIMBP3BA6NNM3 1639 aa15.9■□□□□ 0.14
SOCS6-202ENST00000578377 RIMBP3Q9UFD9 1639 aa15.9■□□□□ 0.14
SOCS6-202ENST00000578377 CEP164Q9UPV0 1460 aa15.87■□□□□ 0.13
SOCS6-202ENST00000578377 FANCD2Q9BXW9 1451 aa15.84■□□□□ 0.13
SOCS6-202ENST00000578377 CYB5RLQ6IPT4 315 aa15.84■□□□□ 0.13
SOCS6-202ENST00000578377 ARHGEF11O15085 1522 aa15.83■□□□□ 0.12
SOCS6-202ENST00000578377 TRHP20396 242 aaPredicted RBP15.81■□□□□ 0.12
SOCS6-202ENST00000578377 URB2Q14146 1524 aaKnown RBP15.77■□□□□ 0.11
SOCS6-202ENST00000578377 SLC4A2P04920 1241 aa15.75■□□□□ 0.11
SOCS6-202ENST00000578377 CFTRP13569 1480 aa15.73■□□□□ 0.11
SOCS6-202ENST00000578377 ZNF608Q9ULD9 1512 aaPredicted RBP15.7■□□□□ 0.1
SOCS6-202ENST00000578377 ARAP1Q96P48 1450 aa15.65■□□□□ 0.1
SOCS6-202ENST00000578377 WIZO95785 1651 aa15.65■□□□□ 0.1
SOCS6-202ENST00000578377 SPINK5Q9NQ38 1064 aaPredicted RBP15.65■□□□□ 0.1
SOCS6-202ENST00000578377 IFT140Q96RY7 1462 aa15.61■□□□□ 0.09
SOCS6-202ENST00000578377 CAPN15O75808 1086 aa15.61■□□□□ 0.09
SOCS6-202ENST00000578377 DSG3P32926 999 aa15.61■□□□□ 0.09
SOCS6-202ENST00000578377 APLP2Q06481 763 aa15.56■□□□□ 0.08
SOCS6-202ENST00000578377 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.54■□□□□ 0.08
SOCS6-202ENST00000578377 HNRNPUL2Q1KMD3 747 aaKnown RBP15.54■□□□□ 0.08
SOCS6-202ENST00000578377 RSF1Q96T23 1441 aaPredicted RBP15.52■□□□□ 0.08
SOCS6-202ENST00000578377 FBLN2P98095 1184 aa15.5■□□□□ 0.07
SOCS6-202ENST00000578377 AQRO60306 1485 aaKnown RBP eCLIP15.49■□□□□ 0.07
SOCS6-202ENST00000578377 TOPBP1Q92547 1522 aa15.48■□□□□ 0.07
SOCS6-202ENST00000578377 EIF4G3O43432 1585 aaKnown RBP15.46■□□□□ 0.07
SOCS6-202ENST00000578377 SAMD1Q6SPF0 538 aaPredicted RBP15.43■□□□□ 0.06
SOCS6-202ENST00000578377 ZNF219Q9P2Y4 722 aaPredicted RBP15.43■□□□□ 0.06
SOCS6-202ENST00000578377 CHD1O14646 1710 aa15.43■□□□□ 0.06
SOCS6-202ENST00000578377 TOP2AP11388 1531 aaKnown RBP15.41■□□□□ 0.06
SOCS6-202ENST00000578377 ABCC8Q09428 1581 aa15.36■□□□□ 0.05
SOCS6-202ENST00000578377 TARBP1Q13395 1621 aaKnown RBP15.35■□□□□ 0.05
SOCS6-202ENST00000578377 CLASP1Q7Z460 1538 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms