RNA–Protein interactions for RNA: ENST00000578278.5

LINC00668-201, long intergenic non-protein coding RNA 668, humanhuman

TSL 3

Gene LINC00668, Length 695 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00668-201ENST00000578278 AEBP2Q6ZN18 517 aaPredicted RBP25.11■■□□□ 1.61
LINC00668-201ENST00000578278 CHIC1Q5VXU3 224 aa23.6■■□□□ 1.37
LINC00668-201ENST00000578278 SENP3Q9H4L4 574 aaPredicted RBP21.42■■□□□ 1.02
LINC00668-201ENST00000578278 PHF23Q9BUL5 403 aaPredicted RBP21.16■□□□□ 0.98
LINC00668-201ENST00000578278 FOXD1Q16676 465 aa20.03■□□□□ 0.8
LINC00668-201ENST00000578278 NISCHQ9Y2I1 1504 aa19.88■□□□□ 0.77
LINC00668-201ENST00000578278 MSH5O43196 834 aa18.8■□□□□ 0.6
LINC00668-201ENST00000578278 POTEDQ86YR6 584 aa18.76■□□□□ 0.59
LINC00668-201ENST00000578278 PLPPR3Q6T4P5 718 aa18.75■□□□□ 0.59
LINC00668-201ENST00000578278 PIAS4Q8N2W9 510 aaPredicted RBP18.67■□□□□ 0.58
LINC00668-201ENST00000578278 PPP6R1Q9UPN7 881 aa18.57■□□□□ 0.56
LINC00668-201ENST00000578278 ABCC9O60706 1549 aa18.55■□□□□ 0.56
LINC00668-201ENST00000578278 ADRA2BP18089 450 aa18.52■□□□□ 0.56
LINC00668-201ENST00000578278 CCDC180Q9P1Z9 1646 aa17.99■□□□□ 0.47
LINC00668-201ENST00000578278 DNAJC5BQ9UF47 199 aa17.95■□□□□ 0.46
LINC00668-201ENST00000578278 RB1CC1Q8TDY2 1594 aa17.36■□□□□ 0.37
LINC00668-201ENST00000578278 PABPN1Q86U42 306 aaKnown RBP eCLIP17.22■□□□□ 0.35
LINC00668-201ENST00000578278 NACADO15069 1562 aa17.14■□□□□ 0.33
LINC00668-201ENST00000578278 MAPK8IP2Q13387 824 aaPredicted RBP17.09■□□□□ 0.33
LINC00668-201ENST00000578278 UNC13AQ9UPW8 1703 aa17.05■□□□□ 0.32
LINC00668-201ENST00000578278 BICRAQ9NZM4 1560 aa17■□□□□ 0.31
LINC00668-201ENST00000578278 DMRT2Q9Y5R5 561 aa16.95■□□□□ 0.3
LINC00668-201ENST00000578278 DCAF8L2P0C7V8 631 aa16.93■□□□□ 0.3
LINC00668-201ENST00000578278 SCAF1Q9H7N4 1312 aaKnown RBP16.9■□□□□ 0.3
LINC00668-201ENST00000578278 MYO15BQ96JP2 1530 aa16.75■□□□□ 0.27
LINC00668-201ENST00000578278 CECR2Q9BXF3 1484 aa16.73■□□□□ 0.27
LINC00668-201ENST00000578278 DNAJC5Q9H3Z4 198 aa16.73■□□□□ 0.27
LINC00668-201ENST00000578278 CC2D2AQ9P2K1 1620 aa16.72■□□□□ 0.27
LINC00668-201ENST00000578278 SHROOM4Q9ULL8 1493 aa16.58■□□□□ 0.24
LINC00668-201ENST00000578278 EIF4G1Q04637 1599 aaKnown RBP16.56■□□□□ 0.24
LINC00668-201ENST00000578278 PPP4R3CPQ6ZMV5 832 aa16.43■□□□□ 0.22
LINC00668-201ENST00000578278 SCRIBQ14160 1630 aa16.41■□□□□ 0.22
LINC00668-201ENST00000578278 ZCCHC6Q5VYS8 1495 aaKnown RBP16.38■□□□□ 0.21
LINC00668-201ENST00000578278 DCAF8L1A6NGE4 600 aa16.38■□□□□ 0.21
LINC00668-201ENST00000578278 DCAF1Q9Y4B6 1507 aa16.36■□□□□ 0.21
LINC00668-201ENST00000578278 KCNA4P22459 653 aa16.35■□□□□ 0.21
LINC00668-201ENST00000578278 CACNB1Q02641 598 aaPredicted RBP16.33■□□□□ 0.2
LINC00668-201ENST00000578278 HOXD11P31277 338 aaPredicted RBP16.22■□□□□ 0.19
LINC00668-201ENST00000578278 EHMT2Q96KQ7 1210 aa16.17■□□□□ 0.18
LINC00668-201ENST00000578278 CNKSR2Q8WXI2 1034 aa16.15■□□□□ 0.18
LINC00668-201ENST00000578278 CUX2O14529 1486 aa16.13■□□□□ 0.17
LINC00668-201ENST00000578278 RNF216Q9NWF9 866 aaPredicted RBP16.06■□□□□ 0.16
LINC00668-201ENST00000578278 RNF39Q9H2S5 420 aa16.02■□□□□ 0.16
LINC00668-201ENST00000578278 ERCC6Q03468 1493 aa15.97■□□□□ 0.15
LINC00668-201ENST00000578278 NCAPD3P42695 1498 aa15.87■□□□□ 0.13
LINC00668-201ENST00000578278 NESP48681 1621 aa15.83■□□□□ 0.13
LINC00668-201ENST00000578278 C1QBPQ07021 282 aaKnown RBP15.77■□□□□ 0.12
LINC00668-201ENST00000578278 ATAD2BQ9ULI0 1458 aa15.77■□□□□ 0.11
LINC00668-201ENST00000578278 TRIM41Q8WV44 630 aa15.76■□□□□ 0.11
LINC00668-201ENST00000578278 THOC2Q8NI27 1593 aaKnown RBP15.74■□□□□ 0.11
LINC00668-201ENST00000578278 NCBP3Q53F19 620 aaKnown RBP15.72■□□□□ 0.11
LINC00668-201ENST00000578278 HMGXB3Q12766 1538 aa15.68■□□□□ 0.1
LINC00668-201ENST00000578278 SLC4A1APQ9BWU0 796 aaKnown RBP15.66■□□□□ 0.1
LINC00668-201ENST00000578278 CSRNP3Q8WYN3 585 aa15.64■□□□□ 0.09
LINC00668-201ENST00000578278 SMARCA2P51531 1590 aa15.62■□□□□ 0.09
LINC00668-201ENST00000578278 SMARCA4P51532 1647 aa15.61■□□□□ 0.09
LINC00668-201ENST00000578278 KIF21AQ7Z4S6 1674 aa15.57■□□□□ 0.08
LINC00668-201ENST00000578278 LAMC3Q9Y6N6 1575 aa15.54■□□□□ 0.08
LINC00668-201ENST00000578278 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.54■□□□□ 0.08
LINC00668-201ENST00000578278 BAZ1BQ9UIG0 1483 aaKnown RBP15.53■□□□□ 0.08
LINC00668-201ENST00000578278 NPM3O75607 178 aaKnown RBP15.5■□□□□ 0.07
LINC00668-201ENST00000578278 PEG3Q9GZU2 1588 aa15.47■□□□□ 0.07
LINC00668-201ENST00000578278 PDS5BQ9NTI5 1447 aa15.45■□□□□ 0.06
LINC00668-201ENST00000578278 BAZ1AQ9NRL2 1556 aaPredicted RBP15.41■□□□□ 0.06
LINC00668-201ENST00000578278 WDR62O43379 1518 aa15.39■□□□□ 0.05
LINC00668-201ENST00000578278 MRC2Q9UBG0 1479 aa15.39■□□□□ 0.05
LINC00668-201ENST00000578278 MROH2BQ7Z745 1585 aa15.36■□□□□ 0.05
LINC00668-201ENST00000578278 CADPSQ9ULU8 1353 aa15.35■□□□□ 0.05
LINC00668-201ENST00000578278 OSCARQ8IYS5 282 aa15.3■□□□□ 0.04
LINC00668-201ENST00000578278 RIMBP3CA6NJZ7 1639 aa15.21■□□□□ 0.03
LINC00668-201ENST00000578278 RIMBP3BA6NNM3 1639 aa15.21■□□□□ 0.03
LINC00668-201ENST00000578278 RIMBP3Q9UFD9 1639 aa15.21■□□□□ 0.03
LINC00668-201ENST00000578278 CEP164Q9UPV0 1460 aa15.21■□□□□ 0.03
LINC00668-201ENST00000578278 FANCD2Q9BXW9 1451 aa15.18■□□□□ 0.02
LINC00668-201ENST00000578278 U3KPZ7 1027 aaPredicted RBP15.14■□□□□ 0.01
LINC00668-201ENST00000578278 URB2Q14146 1524 aaKnown RBP15.13■□□□□ 0.01
LINC00668-201ENST00000578278 WIZO95785 1651 aa15.12■□□□□ 0.01
LINC00668-201ENST00000578278 ARHGEF11O15085 1522 aa15.12■□□□□ 0.01
LINC00668-201ENST00000578278 ZBTB22O15209 634 aa15.11■□□□□ 0.01
LINC00668-201ENST00000578278 CFTRP13569 1480 aa15.09■□□□□ 0.01
LINC00668-201ENST00000578278 ZNF608Q9ULD9 1512 aaPredicted RBP15.04■□□□□ -0
LINC00668-201ENST00000578278 CAPN15O75808 1086 aa15.03■□□□□ -0
LINC00668-201ENST00000578278 SPINK5Q9NQ38 1064 aaPredicted RBP15.03■□□□□ -0
LINC00668-201ENST00000578278 CYB5RLQ6IPT4 315 aa15.01□□□□□ -0.01
LINC00668-201ENST00000578278 ARAP1Q96P48 1450 aa14.95□□□□□ -0.02
LINC00668-201ENST00000578278 TRHP20396 242 aaPredicted RBP14.95□□□□□ -0.02
LINC00668-201ENST00000578278 DSG3P32926 999 aa14.95□□□□□ -0.02
LINC00668-201ENST00000578278 IFT140Q96RY7 1462 aa14.93□□□□□ -0.02
LINC00668-201ENST00000578278 EIF4G3O43432 1585 aaKnown RBP14.88□□□□□ -0.03
LINC00668-201ENST00000578278 TOP2AP11388 1531 aaKnown RBP14.87□□□□□ -0.03
LINC00668-201ENST00000578278 SLC4A2P04920 1241 aa14.86□□□□□ -0.03
LINC00668-201ENST00000578278 CHD1O14646 1710 aa14.86□□□□□ -0.03
LINC00668-201ENST00000578278 TOPBP1Q92547 1522 aa14.85□□□□□ -0.03
LINC00668-201ENST00000578278 RSF1Q96T23 1441 aaPredicted RBP14.84□□□□□ -0.03
LINC00668-201ENST00000578278 PRDM2Q13029 1718 aa14.83□□□□□ -0.04
LINC00668-201ENST00000578278 AQRO60306 1485 aaKnown RBP eCLIP14.82□□□□□ -0.04
LINC00668-201ENST00000578278 TARBP1Q13395 1621 aaKnown RBP14.78□□□□□ -0.04
LINC00668-201ENST00000578278 FOXD4L1Q9NU39 408 aa14.76□□□□□ -0.05
LINC00668-201ENST00000578278 FBLN2P98095 1184 aa14.74□□□□□ -0.05
LINC00668-201ENST00000578278 CCDC88BA6NC98 1476 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms