RNA–Protein interactions for RNA: ENST00000578196.5

EPB41L3-208, Transcript of erythrocyte membrane protein band 4.1 like 3, humanhuman

TSL 4

Gene EPB41L3, Length 549 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41L3-208ENST00000578196 AEBP2Q6ZN18 517 aaPredicted RBP26.52■■□□□ 1.84
EPB41L3-208ENST00000578196 CHIC1Q5VXU3 224 aa25.26■■□□□ 1.63
EPB41L3-208ENST00000578196 SENP3Q9H4L4 574 aaPredicted RBP22.57■■□□□ 1.2
EPB41L3-208ENST00000578196 PHF23Q9BUL5 403 aaPredicted RBP22.28■■□□□ 1.16
EPB41L3-208ENST00000578196 FOXD1Q16676 465 aa21.03■□□□□ 0.96
EPB41L3-208ENST00000578196 NISCHQ9Y2I1 1504 aa20.9■□□□□ 0.94
EPB41L3-208ENST00000578196 PLPPR3Q6T4P5 718 aa20.18■□□□□ 0.82
EPB41L3-208ENST00000578196 PPP6R1Q9UPN7 881 aa19.74■□□□□ 0.75
EPB41L3-208ENST00000578196 MSH5O43196 834 aa19.64■□□□□ 0.73
EPB41L3-208ENST00000578196 ADRA2BP18089 450 aa19.64■□□□□ 0.73
EPB41L3-208ENST00000578196 PIAS4Q8N2W9 510 aaPredicted RBP19.61■□□□□ 0.73
EPB41L3-208ENST00000578196 POTEDQ86YR6 584 aa19.04■□□□□ 0.64
EPB41L3-208ENST00000578196 CCDC180Q9P1Z9 1646 aa18.41■□□□□ 0.54
EPB41L3-208ENST00000578196 MAPK8IP2Q13387 824 aaPredicted RBP18.01■□□□□ 0.47
EPB41L3-208ENST00000578196 DMRT2Q9Y5R5 561 aa17.95■□□□□ 0.46
EPB41L3-208ENST00000578196 SCAF1Q9H7N4 1312 aaKnown RBP17.95■□□□□ 0.46
EPB41L3-208ENST00000578196 PPP4R3CPQ6ZMV5 832 aa17.69■□□□□ 0.42
EPB41L3-208ENST00000578196 ABCC9O60706 1549 aa17.55■□□□□ 0.4
EPB41L3-208ENST00000578196 ZCCHC6Q5VYS8 1495 aaKnown RBP17.51■□□□□ 0.39
EPB41L3-208ENST00000578196 CNKSR2Q8WXI2 1034 aa17.36■□□□□ 0.37
EPB41L3-208ENST00000578196 HOXD11P31277 338 aaPredicted RBP17.34■□□□□ 0.37
EPB41L3-208ENST00000578196 DCAF1Q9Y4B6 1507 aa17.32■□□□□ 0.36
EPB41L3-208ENST00000578196 MYO15BQ96JP2 1530 aa17.23■□□□□ 0.35
EPB41L3-208ENST00000578196 RNF216Q9NWF9 866 aaPredicted RBP17.2■□□□□ 0.34
EPB41L3-208ENST00000578196 DCAF8L2P0C7V8 631 aa17.19■□□□□ 0.34
EPB41L3-208ENST00000578196 NACADO15069 1562 aa17.19■□□□□ 0.34
EPB41L3-208ENST00000578196 RB1CC1Q8TDY2 1594 aa17.08■□□□□ 0.32
EPB41L3-208ENST00000578196 DCAF8L1A6NGE4 600 aa17.02■□□□□ 0.32
EPB41L3-208ENST00000578196 NCBP3Q53F19 620 aaKnown RBP17.01■□□□□ 0.31
EPB41L3-208ENST00000578196 NPM3O75607 178 aaKnown RBP16.81■□□□□ 0.28
EPB41L3-208ENST00000578196 RNF39Q9H2S5 420 aa16.81■□□□□ 0.28
EPB41L3-208ENST00000578196 SCRIBQ14160 1630 aa16.81■□□□□ 0.28
EPB41L3-208ENST00000578196 DNAJC5BQ9UF47 199 aa16.79■□□□□ 0.28
EPB41L3-208ENST00000578196 UNC13AQ9UPW8 1703 aa16.76■□□□□ 0.27
EPB41L3-208ENST00000578196 CACNB1Q02641 598 aaPredicted RBP16.74■□□□□ 0.27
EPB41L3-208ENST00000578196 SHROOM4Q9ULL8 1493 aa16.73■□□□□ 0.27
EPB41L3-208ENST00000578196 BICRAQ9NZM4 1560 aa16.6■□□□□ 0.25
EPB41L3-208ENST00000578196 KCNA4P22459 653 aa16.54■□□□□ 0.24
EPB41L3-208ENST00000578196 C1QBPQ07021 282 aaKnown RBP16.54■□□□□ 0.24
EPB41L3-208ENST00000578196 PABPN1Q86U42 306 aaKnown RBP eCLIP16.46■□□□□ 0.23
EPB41L3-208ENST00000578196 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.39■□□□□ 0.21
EPB41L3-208ENST00000578196 CECR2Q9BXF3 1484 aa16.23■□□□□ 0.19
EPB41L3-208ENST00000578196 BAZ1AQ9NRL2 1556 aaPredicted RBP16.16■□□□□ 0.18
EPB41L3-208ENST00000578196 U3KPZ7 1027 aaPredicted RBP16.15■□□□□ 0.18
EPB41L3-208ENST00000578196 SMARCA4P51532 1647 aa16.14■□□□□ 0.17
EPB41L3-208ENST00000578196 MROH2BQ7Z745 1585 aa16.12■□□□□ 0.17
EPB41L3-208ENST00000578196 EIF4G1Q04637 1599 aaKnown RBP16.09■□□□□ 0.17
EPB41L3-208ENST00000578196 RSF1Q96T23 1441 aaPredicted RBP16.08■□□□□ 0.16
EPB41L3-208ENST00000578196 SLC4A2P04920 1241 aa16.06■□□□□ 0.16
EPB41L3-208ENST00000578196 PEG3Q9GZU2 1588 aa15.99■□□□□ 0.15
EPB41L3-208ENST00000578196 WIZO95785 1651 aa15.98■□□□□ 0.15
EPB41L3-208ENST00000578196 SUPT5HO00267 1087 aaKnown RBP15.94■□□□□ 0.14
EPB41L3-208ENST00000578196 ATAD2BQ9ULI0 1458 aa15.92■□□□□ 0.14
EPB41L3-208ENST00000578196 CC2D2AQ9P2K1 1620 aa15.92■□□□□ 0.14
EPB41L3-208ENST00000578196 SMARCA2P51531 1590 aa15.92■□□□□ 0.14
EPB41L3-208ENST00000578196 SPINK5Q9NQ38 1064 aaPredicted RBP15.85■□□□□ 0.13
EPB41L3-208ENST00000578196 NCAPD3P42695 1498 aa15.84■□□□□ 0.13
EPB41L3-208ENST00000578196 TOP2AP11388 1531 aaKnown RBP15.82■□□□□ 0.12
EPB41L3-208ENST00000578196 HMGXB3Q12766 1538 aa15.82■□□□□ 0.12
EPB41L3-208ENST00000578196 BAZ1BQ9UIG0 1483 aaKnown RBP15.8■□□□□ 0.12
EPB41L3-208ENST00000578196 CAPN15O75808 1086 aa15.75■□□□□ 0.11
EPB41L3-208ENST00000578196 DSG3P32926 999 aa15.74■□□□□ 0.11
EPB41L3-208ENST00000578196 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.67■□□□□ 0.1
EPB41L3-208ENST00000578196 HNRNPUL2Q1KMD3 747 aaKnown RBP15.67■□□□□ 0.1
EPB41L3-208ENST00000578196 APLP2Q06481 763 aa15.65■□□□□ 0.1
EPB41L3-208ENST00000578196 CCDC88BA6NC98 1476 aa15.63■□□□□ 0.09
EPB41L3-208ENST00000578196 SAMD1Q6SPF0 538 aaPredicted RBP15.6■□□□□ 0.09
EPB41L3-208ENST00000578196 SLC4A1APQ9BWU0 796 aaKnown RBP15.6■□□□□ 0.09
EPB41L3-208ENST00000578196 ZNF219Q9P2Y4 722 aaPredicted RBP15.56■□□□□ 0.08
EPB41L3-208ENST00000578196 MYCNP04198 464 aaPredicted RBP15.53■□□□□ 0.08
EPB41L3-208ENST00000578196 TRHP20396 242 aaPredicted RBP15.51■□□□□ 0.07
EPB41L3-208ENST00000578196 FOXD4L1Q9NU39 408 aa15.42■□□□□ 0.06
EPB41L3-208ENST00000578196 CFTRP13569 1480 aa15.41■□□□□ 0.06
EPB41L3-208ENST00000578196 ABCB7O75027 752 aa15.4■□□□□ 0.06
EPB41L3-208ENST00000578196 CADPSQ9ULU8 1353 aa15.38■□□□□ 0.05
EPB41L3-208ENST00000578196 PRDM2Q13029 1718 aa15.37■□□□□ 0.05
EPB41L3-208ENST00000578196 LAMC3Q9Y6N6 1575 aa15.36■□□□□ 0.05
EPB41L3-208ENST00000578196 NESP48681 1621 aa15.33■□□□□ 0.04
EPB41L3-208ENST00000578196 ZBTB22O15209 634 aa15.26■□□□□ 0.03
EPB41L3-208ENST00000578196 FANCD2Q9BXW9 1451 aa15.22■□□□□ 0.03
EPB41L3-208ENST00000578196 PDS5BQ9NTI5 1447 aa15.21■□□□□ 0.03
EPB41L3-208ENST00000578196 ABCC8Q09428 1581 aa15.19■□□□□ 0.02
EPB41L3-208ENST00000578196 KIF21AQ7Z4S6 1674 aa15.19■□□□□ 0.02
EPB41L3-208ENST00000578196 ATF5Q9Y2D1 282 aaPredicted RBP15.18■□□□□ 0.02
EPB41L3-208ENST00000578196 POLA2Q14181 598 aa15.16■□□□□ 0.02
EPB41L3-208ENST00000578196 CEP164Q9UPV0 1460 aa15.15■□□□□ 0.02
EPB41L3-208ENST00000578196 WRNQ14191 1432 aaPredicted RBP eCLIP15.13■□□□□ 0.01
EPB41L3-208ENST00000578196 SYNJ1O43426 1573 aa15.11■□□□□ 0.01
EPB41L3-208ENST00000578196 CUX1P39880 1505 aa15.1■□□□□ 0.01
EPB41L3-208ENST00000578196 TOP2BQ02880 1626 aa15.09■□□□□ 0.01
EPB41L3-208ENST00000578196 BIVM-ERCC5R4GMW8 1640 aa15.09■□□□□ 0.01
EPB41L3-208ENST00000578196 ERCC6Q03468 1493 aa15.07■□□□□ 0
EPB41L3-208ENST00000578196 DNMBPQ6XZF7 1577 aa15.07■□□□□ 0
EPB41L3-208ENST00000578196 URB2Q14146 1524 aaKnown RBP15.06■□□□□ 0
EPB41L3-208ENST00000578196 MRC2Q9UBG0 1479 aa15.05■□□□□ -0
EPB41L3-208ENST00000578196 TRIM41Q8WV44 630 aa15.04■□□□□ -0
EPB41L3-208ENST00000578196 THOC2Q8NI27 1593 aaKnown RBP15.03■□□□□ -0
EPB41L3-208ENST00000578196 TOPBP1Q92547 1522 aa15.03■□□□□ -0
EPB41L3-208ENST00000578196 WDR62O43379 1518 aa15.02□□□□□ -0.01
EPB41L3-208ENST00000578196 RBM42Q9BTD8 480 aaKnown RBP14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms