RNA–Protein interactions for RNA: ENST00000571152.1

LINC00514-201, long intergenic non-protein coding RNA 514, humanhuman

TSL 2

Gene LINC00514, Length 3,385 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00514-201ENST00000571152 NISCHQ9Y2I1 1504 aa27.91■■■□□ 2.06
LINC00514-201ENST00000571152 CCDC180Q9P1Z9 1646 aa24.33■■□□□ 1.49
LINC00514-201ENST00000571152 ABCC9O60706 1549 aa23.51■■□□□ 1.35
LINC00514-201ENST00000571152 DCAF8L2P0C7V8 631 aa23.5■■□□□ 1.35
LINC00514-201ENST00000571152 ZCCHC6Q5VYS8 1495 aaKnown RBP23.36■■□□□ 1.33
LINC00514-201ENST00000571152 SHROOM4Q9ULL8 1493 aa23.27■■□□□ 1.32
LINC00514-201ENST00000571152 SUPT5HO00267 1087 aaKnown RBP23.18■■□□□ 1.3
LINC00514-201ENST00000571152 HRCP23327 699 aa23.02■■□□□ 1.28
LINC00514-201ENST00000571152 DCAF1Q9Y4B6 1507 aa22.95■■□□□ 1.26
LINC00514-201ENST00000571152 PCGF6Q9BYE7 350 aa22.79■■□□□ 1.24
LINC00514-201ENST00000571152 NACADO15069 1562 aa22.79■■□□□ 1.24
LINC00514-201ENST00000571152 MYO15BQ96JP2 1530 aa22.76■■□□□ 1.23
LINC00514-201ENST00000571152 RB1CC1Q8TDY2 1594 aa22.69■■□□□ 1.22
LINC00514-201ENST00000571152 PPARGC1BQ86YN6 1023 aaKnown RBP22.69■■□□□ 1.22
LINC00514-201ENST00000571152 CHIC1Q5VXU3 224 aa22.59■■□□□ 1.21
LINC00514-201ENST00000571152 SCRIBQ14160 1630 aa22.53■■□□□ 1.2
LINC00514-201ENST00000571152 PABPN1Q86U42 306 aaKnown RBP eCLIP22.21■■□□□ 1.15
LINC00514-201ENST00000571152 LOC105371045A0A1W2PR82 267 aa22.18■■□□□ 1.14
LINC00514-201ENST00000571152 UNC13AQ9UPW8 1703 aa22.17■■□□□ 1.14
LINC00514-201ENST00000571152 BICRAQ9NZM4 1560 aa21.99■■□□□ 1.11
LINC00514-201ENST00000571152 TRIM26Q12899 539 aaPredicted RBP21.98■■□□□ 1.11
LINC00514-201ENST00000571152 PELP1Q8IZL8 1130 aaKnown RBP21.92■■□□□ 1.1
LINC00514-201ENST00000571152 CECR2Q9BXF3 1484 aa21.79■■□□□ 1.08
LINC00514-201ENST00000571152 ZEB1P37275 1124 aaPredicted RBP21.73■■□□□ 1.07
LINC00514-201ENST00000571152 SCAF1Q9H7N4 1312 aaKnown RBP21.72■■□□□ 1.07
LINC00514-201ENST00000571152 RSF1Q96T23 1441 aaPredicted RBP21.6■■□□□ 1.05
LINC00514-201ENST00000571152 MROH2BQ7Z745 1585 aa21.6■■□□□ 1.05
LINC00514-201ENST00000571152 BAZ1AQ9NRL2 1556 aaPredicted RBP21.57■■□□□ 1.04
LINC00514-201ENST00000571152 EHMT2Q96KQ7 1210 aa21.51■■□□□ 1.03
LINC00514-201ENST00000571152 FAM9AQ8IZU1 332 aaPredicted RBP21.5■■□□□ 1.03
LINC00514-201ENST00000571152 SMARCA4P51532 1647 aa21.49■■□□□ 1.03
LINC00514-201ENST00000571152 WIZO95785 1651 aa21.4■■□□□ 1.02
LINC00514-201ENST00000571152 EIF4G1Q04637 1599 aaKnown RBP21.4■■□□□ 1.02
LINC00514-201ENST00000571152 TRIM41Q8WV44 630 aa21.39■■□□□ 1.02
LINC00514-201ENST00000571152 ATAD2BQ9ULI0 1458 aa21.25■□□□□ 0.99
LINC00514-201ENST00000571152 ACIN1Q9UKV3 1341 aaKnown RBP21.24■□□□□ 0.99
LINC00514-201ENST00000571152 NEUROD1Q13562 356 aa21.22■□□□□ 0.99
LINC00514-201ENST00000571152 SMARCA2P51531 1590 aa21.19■□□□□ 0.98
LINC00514-201ENST00000571152 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.18■□□□□ 0.98
LINC00514-201ENST00000571152 CC2D2AQ9P2K1 1620 aa21.16■□□□□ 0.98
LINC00514-201ENST00000571152 PEG3Q9GZU2 1588 aa21.16■□□□□ 0.98
LINC00514-201ENST00000571152 CCER1Q8TC90 406 aaPredicted RBP21.15■□□□□ 0.98
LINC00514-201ENST00000571152 BAZ1BQ9UIG0 1483 aaKnown RBP21.15■□□□□ 0.98
LINC00514-201ENST00000571152 GTF3C3Q9Y5Q9 886 aa21.14■□□□□ 0.97
LINC00514-201ENST00000571152 TOP2AP11388 1531 aaKnown RBP21.11■□□□□ 0.97
LINC00514-201ENST00000571152 NCAPD3P42695 1498 aa21.07■□□□□ 0.96
LINC00514-201ENST00000571152 CENPBP07199 599 aaPredicted RBP21.06■□□□□ 0.96
LINC00514-201ENST00000571152 DIEXFQ68CQ4 756 aaKnown RBP21.03■□□□□ 0.96
LINC00514-201ENST00000571152 DNAJC5BQ9UF47 199 aa21■□□□□ 0.95
LINC00514-201ENST00000571152 MYT1Q01538 1121 aa20.99■□□□□ 0.95
LINC00514-201ENST00000571152 HMGXB3Q12766 1538 aa20.97■□□□□ 0.95
LINC00514-201ENST00000571152 CCDC88BA6NC98 1476 aa20.97■□□□□ 0.95
LINC00514-201ENST00000571152 TTBK1Q5TCY1 1321 aaPredicted RBP20.94■□□□□ 0.94
LINC00514-201ENST00000571152 YTHDC1Q96MU7 727 aaKnown RBP20.81■□□□□ 0.92
LINC00514-201ENST00000571152 ZNF316A6NFI3 1004 aaPredicted RBP20.63■□□□□ 0.89
LINC00514-201ENST00000571152 CADPSQ9ULU8 1353 aa20.58■□□□□ 0.89
LINC00514-201ENST00000571152 CFTRP13569 1480 aa20.55■□□□□ 0.88
LINC00514-201ENST00000571152 NESP48681 1621 aa20.54■□□□□ 0.88
LINC00514-201ENST00000571152 MIER1Q8N108 512 aa20.51■□□□□ 0.87
LINC00514-201ENST00000571152 ABCC8Q09428 1581 aa20.49■□□□□ 0.87
LINC00514-201ENST00000571152 UBTFP17480 764 aaKnown RBP20.38■□□□□ 0.85
LINC00514-201ENST00000571152 HNRNPUL2Q1KMD3 747 aaKnown RBP20.38■□□□□ 0.85
LINC00514-201ENST00000571152 LAMC3Q9Y6N6 1575 aa20.38■□□□□ 0.85
LINC00514-201ENST00000571152 WRNQ14191 1432 aaPredicted RBP eCLIP20.37■□□□□ 0.85
LINC00514-201ENST00000571152 FANCD2Q9BXW9 1451 aa20.36■□□□□ 0.85
LINC00514-201ENST00000571152 CEP162Q5TB80 1403 aa20.33■□□□□ 0.85
LINC00514-201ENST00000571152 PDS5BQ9NTI5 1447 aa20.31■□□□□ 0.84
LINC00514-201ENST00000571152 PRDM2Q13029 1718 aa20.28■□□□□ 0.84
LINC00514-201ENST00000571152 SYNJ1O43426 1573 aa20.25■□□□□ 0.83
LINC00514-201ENST00000571152 CEP164Q9UPV0 1460 aa20.25■□□□□ 0.83
LINC00514-201ENST00000571152 CUX1P39880 1505 aa20.2■□□□□ 0.82
LINC00514-201ENST00000571152 CSRNP3Q8WYN3 585 aa20.19■□□□□ 0.82
LINC00514-201ENST00000571152 ERCC6Q03468 1493 aa20.19■□□□□ 0.82
LINC00514-201ENST00000571152 TNIKQ9UKE5 1360 aa20.18■□□□□ 0.82
LINC00514-201ENST00000571152 SOGA1O94964 1423 aa20.18■□□□□ 0.82
LINC00514-201ENST00000571152 KIF21AQ7Z4S6 1674 aa20.18■□□□□ 0.82
LINC00514-201ENST00000571152 TOP2BQ02880 1626 aa20.14■□□□□ 0.81
LINC00514-201ENST00000571152 URB2Q14146 1524 aaKnown RBP20.09■□□□□ 0.81
LINC00514-201ENST00000571152 SUPT16HQ9Y5B9 1047 aaKnown RBP20.09■□□□□ 0.81
LINC00514-201ENST00000571152 TOPBP1Q92547 1522 aa20.08■□□□□ 0.81
LINC00514-201ENST00000571152 BIVM-ERCC5R4GMW8 1640 aa20.08■□□□□ 0.8
LINC00514-201ENST00000571152 RANGAP1P46060 587 aaPredicted RBP20.06■□□□□ 0.8
LINC00514-201ENST00000571152 APLP2Q06481 763 aa20.06■□□□□ 0.8
LINC00514-201ENST00000571152 DNMBPQ6XZF7 1577 aa20.05■□□□□ 0.8
LINC00514-201ENST00000571152 FGD5Q6ZNL6 1462 aa20.05■□□□□ 0.8
LINC00514-201ENST00000571152 RUSC2Q8N2Y8 1516 aa20.04■□□□□ 0.8
LINC00514-201ENST00000571152 MRC2Q9UBG0 1479 aa20.03■□□□□ 0.8
LINC00514-201ENST00000571152 POLA1P09884 1462 aaPredicted RBP19.98■□□□□ 0.79
LINC00514-201ENST00000571152 RAD54L2Q9Y4B4 1467 aa19.97■□□□□ 0.79
LINC00514-201ENST00000571152 TSHZ2Q9NRE2 1034 aa19.95■□□□□ 0.78
LINC00514-201ENST00000571152 GOLGA3Q08378 1498 aa19.93■□□□□ 0.78
LINC00514-201ENST00000571152 CLSPNQ9HAW4 1339 aa19.92■□□□□ 0.78
LINC00514-201ENST00000571152 CUX2O14529 1486 aa19.91■□□□□ 0.78
LINC00514-201ENST00000571152 ANP32EQ9BTT0 268 aa19.91■□□□□ 0.78
LINC00514-201ENST00000571152 EEA1Q15075 1411 aa19.91■□□□□ 0.78
LINC00514-201ENST00000571152 WDR62O43379 1518 aa19.88■□□□□ 0.77
LINC00514-201ENST00000571152 THOC2Q8NI27 1593 aaKnown RBP19.88■□□□□ 0.77
LINC00514-201ENST00000571152 KIF27Q86VH2 1401 aa19.88■□□□□ 0.77
LINC00514-201ENST00000571152 BCANQ96GW7 911 aa19.86■□□□□ 0.77
LINC00514-201ENST00000571152 TDRD9Q8NDG6 1382 aaKnown RBP19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms