RNA–Protein interactions for RNA: ENST00000569027.1

N4BP1-206, Transcript of NEDD4 binding protein 1, humanhuman

TSL 2

Gene N4BP1, Length 536 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
N4BP1-206ENST00000569027 AEBP2Q6ZN18 517 aaPredicted RBP28.85■■■□□ 2.21
N4BP1-206ENST00000569027 CHIC1Q5VXU3 224 aa28.29■■■□□ 2.12
N4BP1-206ENST00000569027 NISCHQ9Y2I1 1504 aa26.32■■□□□ 1.8
N4BP1-206ENST00000569027 PHF23Q9BUL5 403 aaPredicted RBP24.98■■□□□ 1.59
N4BP1-206ENST00000569027 SENP3Q9H4L4 574 aaPredicted RBP24.32■■□□□ 1.48
N4BP1-206ENST00000569027 ABCC9O60706 1549 aa23.45■■□□□ 1.34
N4BP1-206ENST00000569027 CCDC180Q9P1Z9 1646 aa23.44■■□□□ 1.34
N4BP1-206ENST00000569027 PLPPR3Q6T4P5 718 aa23.02■■□□□ 1.28
N4BP1-206ENST00000569027 FOXD1Q16676 465 aa22.63■■□□□ 1.21
N4BP1-206ENST00000569027 RB1CC1Q8TDY2 1594 aa22.36■■□□□ 1.17
N4BP1-206ENST00000569027 NACADO15069 1562 aa22.22■■□□□ 1.15
N4BP1-206ENST00000569027 DNAJC5BQ9UF47 199 aa22.09■■□□□ 1.13
N4BP1-206ENST00000569027 DCAF8L2P0C7V8 631 aa22.02■■□□□ 1.12
N4BP1-206ENST00000569027 ZCCHC6Q5VYS8 1495 aaKnown RBP22■■□□□ 1.11
N4BP1-206ENST00000569027 PPP6R1Q9UPN7 881 aa21.98■■□□□ 1.11
N4BP1-206ENST00000569027 ADRA2BP18089 450 aa21.97■■□□□ 1.11
N4BP1-206ENST00000569027 MYO15BQ96JP2 1530 aa21.96■■□□□ 1.11
N4BP1-206ENST00000569027 PABPN1Q86U42 306 aaKnown RBP eCLIP21.84■■□□□ 1.09
N4BP1-206ENST00000569027 DCAF1Q9Y4B6 1507 aa21.84■■□□□ 1.09
N4BP1-206ENST00000569027 UNC13AQ9UPW8 1703 aa21.75■■□□□ 1.07
N4BP1-206ENST00000569027 BICRAQ9NZM4 1560 aa21.68■■□□□ 1.06
N4BP1-206ENST00000569027 SHROOM4Q9ULL8 1493 aa21.5■■□□□ 1.03
N4BP1-206ENST00000569027 PIAS4Q8N2W9 510 aaPredicted RBP21.38■■□□□ 1.01
N4BP1-206ENST00000569027 SCRIBQ14160 1630 aa21.28■■□□□ 1
N4BP1-206ENST00000569027 CC2D2AQ9P2K1 1620 aa21.19■□□□□ 0.98
N4BP1-206ENST00000569027 CECR2Q9BXF3 1484 aa21.18■□□□□ 0.98
N4BP1-206ENST00000569027 EIF4G1Q04637 1599 aaKnown RBP21.15■□□□□ 0.98
N4BP1-206ENST00000569027 MSH5O43196 834 aa20.68■□□□□ 0.9
N4BP1-206ENST00000569027 NCAPD3P42695 1498 aa20.54■□□□□ 0.88
N4BP1-206ENST00000569027 ATAD2BQ9ULI0 1458 aa20.42■□□□□ 0.86
N4BP1-206ENST00000569027 DNAJC5Q9H3Z4 198 aa20.4■□□□□ 0.86
N4BP1-206ENST00000569027 SMARCA2P51531 1590 aa20.38■□□□□ 0.85
N4BP1-206ENST00000569027 PPP4R3CPQ6ZMV5 832 aa20.36■□□□□ 0.85
N4BP1-206ENST00000569027 HMGXB3Q12766 1538 aa20.35■□□□□ 0.85
N4BP1-206ENST00000569027 SMARCA4P51532 1647 aa20.35■□□□□ 0.85
N4BP1-206ENST00000569027 BAZ1AQ9NRL2 1556 aaPredicted RBP20.34■□□□□ 0.85
N4BP1-206ENST00000569027 CUX2O14529 1486 aa20.33■□□□□ 0.85
N4BP1-206ENST00000569027 ERCC6Q03468 1493 aa20.29■□□□□ 0.84
N4BP1-206ENST00000569027 MROH2BQ7Z745 1585 aa20.29■□□□□ 0.84
N4BP1-206ENST00000569027 PEG3Q9GZU2 1588 aa20.21■□□□□ 0.83
N4BP1-206ENST00000569027 BAZ1BQ9UIG0 1483 aaKnown RBP20.2■□□□□ 0.82
N4BP1-206ENST00000569027 KCNA4P22459 653 aa20.19■□□□□ 0.82
N4BP1-206ENST00000569027 RSF1Q96T23 1441 aaPredicted RBP20.19■□□□□ 0.82
N4BP1-206ENST00000569027 NESP48681 1621 aa20.13■□□□□ 0.81
N4BP1-206ENST00000569027 WIZO95785 1651 aa20.05■□□□□ 0.8
N4BP1-206ENST00000569027 LAMC3Q9Y6N6 1575 aa20.04■□□□□ 0.8
N4BP1-206ENST00000569027 PDS5BQ9NTI5 1447 aa19.96■□□□□ 0.79
N4BP1-206ENST00000569027 THOC2Q8NI27 1593 aaKnown RBP19.94■□□□□ 0.78
N4BP1-206ENST00000569027 SCAF1Q9H7N4 1312 aaKnown RBP19.92■□□□□ 0.78
N4BP1-206ENST00000569027 CADPSQ9ULU8 1353 aa19.9■□□□□ 0.78
N4BP1-206ENST00000569027 MAPK8IP2Q13387 824 aaPredicted RBP19.89■□□□□ 0.77
N4BP1-206ENST00000569027 TOP2AP11388 1531 aaKnown RBP19.86■□□□□ 0.77
N4BP1-206ENST00000569027 KIF21AQ7Z4S6 1674 aa19.84■□□□□ 0.77
N4BP1-206ENST00000569027 NCBP3Q53F19 620 aaKnown RBP19.8■□□□□ 0.76
N4BP1-206ENST00000569027 SUPT5HO00267 1087 aaKnown RBP19.78■□□□□ 0.76
N4BP1-206ENST00000569027 POTEDQ86YR6 584 aa19.76■□□□□ 0.75
N4BP1-206ENST00000569027 MRC2Q9UBG0 1479 aa19.75■□□□□ 0.75
N4BP1-206ENST00000569027 CNKSR2Q8WXI2 1034 aa19.7■□□□□ 0.74
N4BP1-206ENST00000569027 WDR62O43379 1518 aa19.7■□□□□ 0.74
N4BP1-206ENST00000569027 CCDC88BA6NC98 1476 aa19.65■□□□□ 0.74
N4BP1-206ENST00000569027 CFTRP13569 1480 aa19.65■□□□□ 0.74
N4BP1-206ENST00000569027 CEP164Q9UPV0 1460 aa19.65■□□□□ 0.74
N4BP1-206ENST00000569027 FANCD2Q9BXW9 1451 aa19.63■□□□□ 0.73
N4BP1-206ENST00000569027 NPM3O75607 178 aaKnown RBP19.63■□□□□ 0.73
N4BP1-206ENST00000569027 DMRT2Q9Y5R5 561 aa19.48■□□□□ 0.71
N4BP1-206ENST00000569027 URB2Q14146 1524 aaKnown RBP19.46■□□□□ 0.71
N4BP1-206ENST00000569027 OSCARQ8IYS5 282 aa19.41■□□□□ 0.7
N4BP1-206ENST00000569027 TRIM41Q8WV44 630 aa19.38■□□□□ 0.69
N4BP1-206ENST00000569027 PRDM2Q13029 1718 aa19.36■□□□□ 0.69
N4BP1-206ENST00000569027 IFT140Q96RY7 1462 aa19.29■□□□□ 0.68
N4BP1-206ENST00000569027 ABCC8Q09428 1581 aa19.27■□□□□ 0.68
N4BP1-206ENST00000569027 RNF216Q9NWF9 866 aaPredicted RBP19.26■□□□□ 0.67
N4BP1-206ENST00000569027 TOPBP1Q92547 1522 aa19.25■□□□□ 0.67
N4BP1-206ENST00000569027 SLC4A1APQ9BWU0 796 aaKnown RBP19.22■□□□□ 0.67
N4BP1-206ENST00000569027 ZNF608Q9ULD9 1512 aaPredicted RBP19.2■□□□□ 0.66
N4BP1-206ENST00000569027 DNMBPQ6XZF7 1577 aa19.17■□□□□ 0.66
N4BP1-206ENST00000569027 HOXD11P31277 338 aaPredicted RBP19.14■□□□□ 0.65
N4BP1-206ENST00000569027 EIF4G3O43432 1585 aaKnown RBP19.08■□□□□ 0.65
N4BP1-206ENST00000569027 TARBP1Q13395 1621 aaKnown RBP19.07■□□□□ 0.64
N4BP1-206ENST00000569027 RIMBP3CA6NJZ7 1639 aa19.06■□□□□ 0.64
N4BP1-206ENST00000569027 RIMBP3BA6NNM3 1639 aa19.06■□□□□ 0.64
N4BP1-206ENST00000569027 RIMBP3Q9UFD9 1639 aa19.06■□□□□ 0.64
N4BP1-206ENST00000569027 AQRO60306 1485 aaKnown RBP eCLIP19.04■□□□□ 0.64
N4BP1-206ENST00000569027 POLA1P09884 1462 aaPredicted RBP19.04■□□□□ 0.64
N4BP1-206ENST00000569027 ARHGEF11O15085 1522 aa19.02■□□□□ 0.64
N4BP1-206ENST00000569027 CUX1P39880 1505 aa19.01■□□□□ 0.63
N4BP1-206ENST00000569027 EHMT2Q96KQ7 1210 aa19■□□□□ 0.63
N4BP1-206ENST00000569027 SOGA1O94964 1423 aa18.98■□□□□ 0.63
N4BP1-206ENST00000569027 WRNQ14191 1432 aaPredicted RBP eCLIP18.96■□□□□ 0.63
N4BP1-206ENST00000569027 RAD54L2Q9Y4B4 1467 aa18.95■□□□□ 0.62
N4BP1-206ENST00000569027 WDR97A6NE52 1622 aa18.94■□□□□ 0.62
N4BP1-206ENST00000569027 SYNJ1O43426 1573 aa18.93■□□□□ 0.62
N4BP1-206ENST00000569027 TDRD9Q8NDG6 1382 aaKnown RBP18.93■□□□□ 0.62
N4BP1-206ENST00000569027 BIVM-ERCC5R4GMW8 1640 aa18.92■□□□□ 0.62
N4BP1-206ENST00000569027 CHD1O14646 1710 aa18.92■□□□□ 0.62
N4BP1-206ENST00000569027 FBLN2P98095 1184 aa18.92■□□□□ 0.62
N4BP1-206ENST00000569027 TOP2BQ02880 1626 aa18.92■□□□□ 0.62
N4BP1-206ENST00000569027 CYB5RLQ6IPT4 315 aa18.9■□□□□ 0.62
N4BP1-206ENST00000569027 FGD5Q6ZNL6 1462 aa18.9■□□□□ 0.62
N4BP1-206ENST00000569027 MAGI1Q96QZ7 1491 aaPredicted RBP18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms