RNA–Protein interactions for RNA: ENST00000567780.1

HOXC-AS3-204, HOXC cluster antisense RNA 3, humanhuman

Gene HOXC-AS3, Length 2,816 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC-AS3-204ENST00000567780 NISCHQ9Y2I1 1504 aa25.79■■□□□ 1.72
HOXC-AS3-204ENST00000567780 SHROOM4Q9ULL8 1493 aa22.14■■□□□ 1.13
HOXC-AS3-204ENST00000567780 CCDC180Q9P1Z9 1646 aa21.86■■□□□ 1.09
HOXC-AS3-204ENST00000567780 ZCCHC6Q5VYS8 1495 aaKnown RBP21.78■■□□□ 1.08
HOXC-AS3-204ENST00000567780 DCAF8L2P0C7V8 631 aa21.7■■□□□ 1.06
HOXC-AS3-204ENST00000567780 SUPT5HO00267 1087 aaKnown RBP21.69■■□□□ 1.06
HOXC-AS3-204ENST00000567780 DCAF1Q9Y4B6 1507 aa21.07■□□□□ 0.96
HOXC-AS3-204ENST00000567780 CHIC1Q5VXU3 224 aa20.95■□□□□ 0.94
HOXC-AS3-204ENST00000567780 MYO15BQ96JP2 1530 aa20.79■□□□□ 0.92
HOXC-AS3-204ENST00000567780 SCRIBQ14160 1630 aa20.63■□□□□ 0.89
HOXC-AS3-204ENST00000567780 ABCC9O60706 1549 aa20.54■□□□□ 0.88
HOXC-AS3-204ENST00000567780 RSF1Q96T23 1441 aaPredicted RBP20.42■□□□□ 0.86
HOXC-AS3-204ENST00000567780 LOC105371045A0A1W2PR82 267 aa20.4■□□□□ 0.86
HOXC-AS3-204ENST00000567780 NACADO15069 1562 aa20.3■□□□□ 0.84
HOXC-AS3-204ENST00000567780 PCGF6Q9BYE7 350 aa20.29■□□□□ 0.84
HOXC-AS3-204ENST00000567780 CECR2Q9BXF3 1484 aa20.19■□□□□ 0.82
HOXC-AS3-204ENST00000567780 RB1CC1Q8TDY2 1594 aa20.17■□□□□ 0.82
HOXC-AS3-204ENST00000567780 TRIM41Q8WV44 630 aa20.17■□□□□ 0.82
HOXC-AS3-204ENST00000567780 HRCP23327 699 aa20.14■□□□□ 0.82
HOXC-AS3-204ENST00000567780 MROH2BQ7Z745 1585 aa20.08■□□□□ 0.8
HOXC-AS3-204ENST00000567780 FAM9AQ8IZU1 332 aaPredicted RBP20.08■□□□□ 0.8
HOXC-AS3-204ENST00000567780 EHMT2Q96KQ7 1210 aa19.98■□□□□ 0.79
HOXC-AS3-204ENST00000567780 WIZO95785 1651 aa19.95■□□□□ 0.78
HOXC-AS3-204ENST00000567780 TRIM26Q12899 539 aaPredicted RBP19.85■□□□□ 0.77
HOXC-AS3-204ENST00000567780 PPARGC1BQ86YN6 1023 aaKnown RBP19.82■□□□□ 0.76
HOXC-AS3-204ENST00000567780 BAZ1AQ9NRL2 1556 aaPredicted RBP19.81■□□□□ 0.76
HOXC-AS3-204ENST00000567780 PABPN1Q86U42 306 aaKnown RBP eCLIP19.7■□□□□ 0.74
HOXC-AS3-204ENST00000567780 SMARCA4P51532 1647 aa19.64■□□□□ 0.74
HOXC-AS3-204ENST00000567780 UNC13AQ9UPW8 1703 aa19.64■□□□□ 0.73
HOXC-AS3-204ENST00000567780 TOP2AP11388 1531 aaKnown RBP19.61■□□□□ 0.73
HOXC-AS3-204ENST00000567780 CCDC88BA6NC98 1476 aa19.58■□□□□ 0.73
HOXC-AS3-204ENST00000567780 EIF4G1Q04637 1599 aaKnown RBP19.54■□□□□ 0.72
HOXC-AS3-204ENST00000567780 ABCC8Q09428 1581 aa19.52■□□□□ 0.72
HOXC-AS3-204ENST00000567780 SMARCA2P51531 1590 aa19.5■□□□□ 0.71
HOXC-AS3-204ENST00000567780 BICRAQ9NZM4 1560 aa19.44■□□□□ 0.7
HOXC-AS3-204ENST00000567780 ZEB1P37275 1124 aaPredicted RBP19.36■□□□□ 0.69
HOXC-AS3-204ENST00000567780 SOGA1O94964 1423 aa19.35■□□□□ 0.69
HOXC-AS3-204ENST00000567780 TTBK1Q5TCY1 1321 aaPredicted RBP19.3■□□□□ 0.68
HOXC-AS3-204ENST00000567780 UBTFP17480 764 aaKnown RBP19.26■□□□□ 0.67
HOXC-AS3-204ENST00000567780 CSRNP3Q8WYN3 585 aa19.26■□□□□ 0.67
HOXC-AS3-204ENST00000567780 RUSC2Q8N2Y8 1516 aa19.25■□□□□ 0.67
HOXC-AS3-204ENST00000567780 CEP162Q5TB80 1403 aa19.21■□□□□ 0.67
HOXC-AS3-204ENST00000567780 WRNQ14191 1432 aaPredicted RBP eCLIP19.21■□□□□ 0.67
HOXC-AS3-204ENST00000567780 PEG3Q9GZU2 1588 aa19.21■□□□□ 0.67
HOXC-AS3-204ENST00000567780 ATAD2BQ9ULI0 1458 aa19.21■□□□□ 0.67
HOXC-AS3-204ENST00000567780 BAZ1BQ9UIG0 1483 aaKnown RBP19.18■□□□□ 0.66
HOXC-AS3-204ENST00000567780 EEA1Q15075 1411 aa19.16■□□□□ 0.66
HOXC-AS3-204ENST00000567780 TNIKQ9UKE5 1360 aa19.16■□□□□ 0.66
HOXC-AS3-204ENST00000567780 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.15■□□□□ 0.66
HOXC-AS3-204ENST00000567780 CCER1Q8TC90 406 aaPredicted RBP19.1■□□□□ 0.65
HOXC-AS3-204ENST00000567780 GOLGA3Q08378 1498 aa19.07■□□□□ 0.64
HOXC-AS3-204ENST00000567780 SYNJ1O43426 1573 aa19.06■□□□□ 0.64
HOXC-AS3-204ENST00000567780 RANGAP1P46060 587 aaPredicted RBP18.99■□□□□ 0.63
HOXC-AS3-204ENST00000567780 CEP164Q9UPV0 1460 aa18.96■□□□□ 0.63
HOXC-AS3-204ENST00000567780 CLIP1P30622 1438 aa18.89■□□□□ 0.61
HOXC-AS3-204ENST00000567780 RAPGEF2Q9Y4G8 1499 aa18.86■□□□□ 0.61
HOXC-AS3-204ENST00000567780 KIF21BO75037 1637 aa18.86■□□□□ 0.61
HOXC-AS3-204ENST00000567780 NCAPD3P42695 1498 aa18.82■□□□□ 0.6
HOXC-AS3-204ENST00000567780 APLP2Q06481 763 aa18.82■□□□□ 0.6
HOXC-AS3-204ENST00000567780 TOP2BQ02880 1626 aa18.81■□□□□ 0.6
HOXC-AS3-204ENST00000567780 HNRNPUL2Q1KMD3 747 aaKnown RBP18.79■□□□□ 0.6
HOXC-AS3-204ENST00000567780 HMGXB3Q12766 1538 aa18.77■□□□□ 0.59
HOXC-AS3-204ENST00000567780 VPS8Q8N3P4 1428 aa18.75■□□□□ 0.59
HOXC-AS3-204ENST00000567780 BIVM-ERCC5R4GMW8 1640 aa18.7■□□□□ 0.58
HOXC-AS3-204ENST00000567780 CUX1P39880 1505 aa18.69■□□□□ 0.58
HOXC-AS3-204ENST00000567780 CFTRP13569 1480 aa18.66■□□□□ 0.58
HOXC-AS3-204ENST00000567780 PRXQ9BXM0 1461 aa18.64■□□□□ 0.57
HOXC-AS3-204ENST00000567780 DIEXFQ68CQ4 756 aaKnown RBP18.64■□□□□ 0.57
HOXC-AS3-204ENST00000567780 KIF27Q86VH2 1401 aa18.63■□□□□ 0.57
HOXC-AS3-204ENST00000567780 ERICH3Q5RHP9 1530 aa18.58■□□□□ 0.57
HOXC-AS3-204ENST00000567780 PELP1Q8IZL8 1130 aaKnown RBP18.56■□□□□ 0.56
HOXC-AS3-204ENST00000567780 ARAP1Q96P48 1450 aa18.53■□□□□ 0.56
HOXC-AS3-204ENST00000567780 KANK4Q5T7N3 995 aaPredicted RBP18.52■□□□□ 0.56
HOXC-AS3-204ENST00000567780 SCAF1Q9H7N4 1312 aaKnown RBP18.52■□□□□ 0.56
HOXC-AS3-204ENST00000567780 CADPSQ9ULU8 1353 aa18.51■□□□□ 0.55
HOXC-AS3-204ENST00000567780 ZNF316A6NFI3 1004 aaPredicted RBP18.5■□□□□ 0.55
HOXC-AS3-204ENST00000567780 CUX2O14529 1486 aa18.49■□□□□ 0.55
HOXC-AS3-204ENST00000567780 IGF1RP08069 1367 aa18.44■□□□□ 0.54
HOXC-AS3-204ENST00000567780 CC2D2AQ9P2K1 1620 aa18.4■□□□□ 0.54
HOXC-AS3-204ENST00000567780 ARHGAP35Q9NRY4 1499 aa18.4■□□□□ 0.54
HOXC-AS3-204ENST00000567780 FGD5Q6ZNL6 1462 aa18.4■□□□□ 0.54
HOXC-AS3-204ENST00000567780 NEUROD1Q13562 356 aa18.39■□□□□ 0.53
HOXC-AS3-204ENST00000567780 CARMIL1Q5VZK9 1371 aa18.38■□□□□ 0.53
HOXC-AS3-204ENST00000567780 ACIN1Q9UKV3 1341 aaKnown RBP18.38■□□□□ 0.53
HOXC-AS3-204ENST00000567780 ITGAEP38570 1179 aa18.37■□□□□ 0.53
HOXC-AS3-204ENST00000567780 PRDM2Q13029 1718 aa18.36■□□□□ 0.53
HOXC-AS3-204ENST00000567780 CENPBP07199 599 aaPredicted RBP18.33■□□□□ 0.53
HOXC-AS3-204ENST00000567780 FANCD2Q9BXW9 1451 aa18.33■□□□□ 0.53
HOXC-AS3-204ENST00000567780 P3H3Q8IVL6 736 aa18.32■□□□□ 0.52
HOXC-AS3-204ENST00000567780 ATP1B4Q9UN42 357 aaPredicted RBP18.3■□□□□ 0.52
HOXC-AS3-204ENST00000567780 DHX57Q6P158 1386 aaKnown RBP18.28■□□□□ 0.52
HOXC-AS3-204ENST00000567780 YTHDC1Q96MU7 727 aaKnown RBP18.28■□□□□ 0.52
HOXC-AS3-204ENST00000567780 CCNB3Q8WWL7 1395 aa18.28■□□□□ 0.52
HOXC-AS3-204ENST00000567780 RRBP1Q9P2E9 1410 aaKnown RBP18.27■□□□□ 0.52
HOXC-AS3-204ENST00000567780 RAD54L2Q9Y4B4 1467 aa18.26■□□□□ 0.51
HOXC-AS3-204ENST00000567780 NESP48681 1621 aa18.26■□□□□ 0.51
HOXC-AS3-204ENST00000567780 MIER1Q8N108 512 aa18.25■□□□□ 0.51
HOXC-AS3-204ENST00000567780 GTF3C3Q9Y5Q9 886 aa18.21■□□□□ 0.51
HOXC-AS3-204ENST00000567780 CLSPNQ9HAW4 1339 aa18.21■□□□□ 0.51
HOXC-AS3-204ENST00000567780 TOPBP1Q92547 1522 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms