RNA–Protein interactions for RNA: ENST00000566251.1

TUBGCP4-211, Transcript of tubulin gamma complex associated protein 4, humanhuman

TSL 3

Gene TUBGCP4, Length 460 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP4-211ENST00000566251 NISCHQ9Y2I1 1504 aa22.28■■□□□ 1.16
TUBGCP4-211ENST00000566251 CHIC1Q5VXU3 224 aa22.11■■□□□ 1.13
TUBGCP4-211ENST00000566251 AEBP2Q6ZN18 517 aaPredicted RBP21.64■■□□□ 1.05
TUBGCP4-211ENST00000566251 PHF23Q9BUL5 403 aaPredicted RBP19.58■□□□□ 0.72
TUBGCP4-211ENST00000566251 CCDC180Q9P1Z9 1646 aa19.47■□□□□ 0.71
TUBGCP4-211ENST00000566251 ZCCHC6Q5VYS8 1495 aaKnown RBP18.67■□□□□ 0.58
TUBGCP4-211ENST00000566251 ABCC9O60706 1549 aa18.65■□□□□ 0.58
TUBGCP4-211ENST00000566251 DCAF8L2P0C7V8 631 aa18.53■□□□□ 0.56
TUBGCP4-211ENST00000566251 DCAF1Q9Y4B6 1507 aa18.47■□□□□ 0.55
TUBGCP4-211ENST00000566251 PLPPR3Q6T4P5 718 aa18.37■□□□□ 0.53
TUBGCP4-211ENST00000566251 MYO15BQ96JP2 1530 aa18.3■□□□□ 0.52
TUBGCP4-211ENST00000566251 NACADO15069 1562 aa18.2■□□□□ 0.5
TUBGCP4-211ENST00000566251 SENP3Q9H4L4 574 aaPredicted RBP18.14■□□□□ 0.49
TUBGCP4-211ENST00000566251 SHROOM4Q9ULL8 1493 aa18.08■□□□□ 0.49
TUBGCP4-211ENST00000566251 RB1CC1Q8TDY2 1594 aa18.05■□□□□ 0.48
TUBGCP4-211ENST00000566251 DNAJC5BQ9UF47 199 aa17.87■□□□□ 0.45
TUBGCP4-211ENST00000566251 SCRIBQ14160 1630 aa17.83■□□□□ 0.44
TUBGCP4-211ENST00000566251 UNC13AQ9UPW8 1703 aa17.48■□□□□ 0.39
TUBGCP4-211ENST00000566251 SUPT5HO00267 1087 aaKnown RBP17.46■□□□□ 0.39
TUBGCP4-211ENST00000566251 PABPN1Q86U42 306 aaKnown RBP eCLIP17.4■□□□□ 0.38
TUBGCP4-211ENST00000566251 BICRAQ9NZM4 1560 aa17.37■□□□□ 0.37
TUBGCP4-211ENST00000566251 BAZ1AQ9NRL2 1556 aaPredicted RBP17.25■□□□□ 0.35
TUBGCP4-211ENST00000566251 RSF1Q96T23 1441 aaPredicted RBP17.25■□□□□ 0.35
TUBGCP4-211ENST00000566251 CECR2Q9BXF3 1484 aa17.24■□□□□ 0.35
TUBGCP4-211ENST00000566251 ADRA2BP18089 450 aa17.2■□□□□ 0.34
TUBGCP4-211ENST00000566251 MROH2BQ7Z745 1585 aa17.15■□□□□ 0.34
TUBGCP4-211ENST00000566251 SMARCA4P51532 1647 aa17.11■□□□□ 0.33
TUBGCP4-211ENST00000566251 KCNA4P22459 653 aa17.11■□□□□ 0.33
TUBGCP4-211ENST00000566251 EHMT2Q96KQ7 1210 aa17.11■□□□□ 0.33
TUBGCP4-211ENST00000566251 WIZO95785 1651 aa16.98■□□□□ 0.31
TUBGCP4-211ENST00000566251 PPP6R1Q9UPN7 881 aa16.94■□□□□ 0.3
TUBGCP4-211ENST00000566251 SMARCA2P51531 1590 aa16.93■□□□□ 0.3
TUBGCP4-211ENST00000566251 PEG3Q9GZU2 1588 aa16.93■□□□□ 0.3
TUBGCP4-211ENST00000566251 EIF4G1Q04637 1599 aaKnown RBP16.91■□□□□ 0.3
TUBGCP4-211ENST00000566251 TOP2AP11388 1531 aaKnown RBP16.89■□□□□ 0.29
TUBGCP4-211ENST00000566251 ATAD2BQ9ULI0 1458 aa16.88■□□□□ 0.29
TUBGCP4-211ENST00000566251 CC2D2AQ9P2K1 1620 aa16.82■□□□□ 0.28
TUBGCP4-211ENST00000566251 BAZ1BQ9UIG0 1483 aaKnown RBP16.82■□□□□ 0.28
TUBGCP4-211ENST00000566251 NCAPD3P42695 1498 aa16.8■□□□□ 0.28
TUBGCP4-211ENST00000566251 FOXD1Q16676 465 aa16.75■□□□□ 0.27
TUBGCP4-211ENST00000566251 HMGXB3Q12766 1538 aa16.73■□□□□ 0.27
TUBGCP4-211ENST00000566251 CCDC88BA6NC98 1476 aa16.71■□□□□ 0.27
TUBGCP4-211ENST00000566251 DNAJC5Q9H3Z4 198 aa16.68■□□□□ 0.26
TUBGCP4-211ENST00000566251 CSRNP3Q8WYN3 585 aa16.53■□□□□ 0.24
TUBGCP4-211ENST00000566251 TRIM41Q8WV44 630 aa16.5■□□□□ 0.23
TUBGCP4-211ENST00000566251 SLC4A1APQ9BWU0 796 aaKnown RBP16.45■□□□□ 0.22
TUBGCP4-211ENST00000566251 CADPSQ9ULU8 1353 aa16.38■□□□□ 0.21
TUBGCP4-211ENST00000566251 CFTRP13569 1480 aa16.37■□□□□ 0.21
TUBGCP4-211ENST00000566251 PPP4R3CPQ6ZMV5 832 aa16.32■□□□□ 0.2
TUBGCP4-211ENST00000566251 WRNQ14191 1432 aaPredicted RBP eCLIP16.28■□□□□ 0.2
TUBGCP4-211ENST00000566251 ABCC8Q09428 1581 aa16.26■□□□□ 0.19
TUBGCP4-211ENST00000566251 LAMC3Q9Y6N6 1575 aa16.22■□□□□ 0.19
TUBGCP4-211ENST00000566251 CUX2O14529 1486 aa16.22■□□□□ 0.19
TUBGCP4-211ENST00000566251 PRDM2Q13029 1718 aa16.21■□□□□ 0.19
TUBGCP4-211ENST00000566251 PDS5BQ9NTI5 1447 aa16.18■□□□□ 0.18
TUBGCP4-211ENST00000566251 NCBP3Q53F19 620 aaKnown RBP16.16■□□□□ 0.18
TUBGCP4-211ENST00000566251 FANCD2Q9BXW9 1451 aa16.15■□□□□ 0.18
TUBGCP4-211ENST00000566251 ERCC6Q03468 1493 aa16.12■□□□□ 0.17
TUBGCP4-211ENST00000566251 NESP48681 1621 aa16.12■□□□□ 0.17
TUBGCP4-211ENST00000566251 TOP2BQ02880 1626 aa16.12■□□□□ 0.17
TUBGCP4-211ENST00000566251 EEA1Q15075 1411 aa16.11■□□□□ 0.17
TUBGCP4-211ENST00000566251 FAM9AQ8IZU1 332 aaPredicted RBP16.11■□□□□ 0.17
TUBGCP4-211ENST00000566251 SYNJ1O43426 1573 aa16.1■□□□□ 0.17
TUBGCP4-211ENST00000566251 CEP164Q9UPV0 1460 aa16.08■□□□□ 0.16
TUBGCP4-211ENST00000566251 BIVM-ERCC5R4GMW8 1640 aa16.08■□□□□ 0.16
TUBGCP4-211ENST00000566251 CUX1P39880 1505 aa16.05■□□□□ 0.16
TUBGCP4-211ENST00000566251 LOC105371045A0A1W2PR82 267 aa15.99■□□□□ 0.15
TUBGCP4-211ENST00000566251 SOGA1O94964 1423 aa15.99■□□□□ 0.15
TUBGCP4-211ENST00000566251 DNMBPQ6XZF7 1577 aa15.99■□□□□ 0.15
TUBGCP4-211ENST00000566251 PIAS4Q8N2W9 510 aaPredicted RBP15.98■□□□□ 0.15
TUBGCP4-211ENST00000566251 NPM3O75607 178 aaKnown RBP15.97■□□□□ 0.15
TUBGCP4-211ENST00000566251 TOPBP1Q92547 1522 aa15.94■□□□□ 0.14
TUBGCP4-211ENST00000566251 KIF27Q86VH2 1401 aa15.94■□□□□ 0.14
TUBGCP4-211ENST00000566251 FGD5Q6ZNL6 1462 aa15.92■□□□□ 0.14
TUBGCP4-211ENST00000566251 KIF21AQ7Z4S6 1674 aa15.9■□□□□ 0.14
TUBGCP4-211ENST00000566251 MRC2Q9UBG0 1479 aa15.9■□□□□ 0.14
TUBGCP4-211ENST00000566251 URB2Q14146 1524 aaKnown RBP15.89■□□□□ 0.13
TUBGCP4-211ENST00000566251 RUSC2Q8N2Y8 1516 aa15.89■□□□□ 0.13
TUBGCP4-211ENST00000566251 POLA1P09884 1462 aaPredicted RBP15.85■□□□□ 0.13
TUBGCP4-211ENST00000566251 UBTFP17480 764 aaKnown RBP15.83■□□□□ 0.12
TUBGCP4-211ENST00000566251 THOC2Q8NI27 1593 aaKnown RBP15.82■□□□□ 0.12
TUBGCP4-211ENST00000566251 GOLGA3Q08378 1498 aa15.81■□□□□ 0.12
TUBGCP4-211ENST00000566251 ABCA10Q8WWZ4 1543 aa15.81■□□□□ 0.12
TUBGCP4-211ENST00000566251 ZBTB22O15209 634 aa15.8■□□□□ 0.12
TUBGCP4-211ENST00000566251 RAD54L2Q9Y4B4 1467 aa15.78■□□□□ 0.12
TUBGCP4-211ENST00000566251 KIF21BO75037 1637 aa15.78■□□□□ 0.12
TUBGCP4-211ENST00000566251 TNIKQ9UKE5 1360 aa15.77■□□□□ 0.12
TUBGCP4-211ENST00000566251 WDR62O43379 1518 aa15.77■□□□□ 0.11
TUBGCP4-211ENST00000566251 IGF1RP08069 1367 aa15.75■□□□□ 0.11
TUBGCP4-211ENST00000566251 IFT140Q96RY7 1462 aa15.72■□□□□ 0.11
TUBGCP4-211ENST00000566251 PRXQ9BXM0 1461 aa15.72■□□□□ 0.11
TUBGCP4-211ENST00000566251 ERICH3Q5RHP9 1530 aa15.72■□□□□ 0.11
TUBGCP4-211ENST00000566251 CARMIL1Q5VZK9 1371 aa15.7■□□□□ 0.1
TUBGCP4-211ENST00000566251 GAPVD1Q14C86 1478 aa15.68■□□□□ 0.1
TUBGCP4-211ENST00000566251 TDRD9Q8NDG6 1382 aaKnown RBP15.68■□□□□ 0.1
TUBGCP4-211ENST00000566251 RAPGEF2Q9Y4G8 1499 aa15.67■□□□□ 0.1
TUBGCP4-211ENST00000566251 TARBP1Q13395 1621 aaKnown RBP15.67■□□□□ 0.1
TUBGCP4-211ENST00000566251 WDR97A6NE52 1622 aa15.65■□□□□ 0.1
TUBGCP4-211ENST00000566251 CNKSR2Q8WXI2 1034 aa15.64■□□□□ 0.09
TUBGCP4-211ENST00000566251 CEP162Q5TB80 1403 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms