RNA–Protein interactions for RNA: ENST00000564617.5

IRF8-205, Transcript of interferon regulatory factor 8, humanhuman

TSL 4

Gene IRF8, Length 531 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF8-205ENST00000564617 NISCHQ9Y2I1 1504 aa26.35■■□□□ 1.81
IRF8-205ENST00000564617 ABCC9O60706 1549 aa23.09■■□□□ 1.29
IRF8-205ENST00000564617 CCDC180Q9P1Z9 1646 aa22.92■■□□□ 1.26
IRF8-205ENST00000564617 ZCCHC6Q5VYS8 1495 aaKnown RBP22.2■■□□□ 1.14
IRF8-205ENST00000564617 DCAF1Q9Y4B6 1507 aa21.91■■□□□ 1.1
IRF8-205ENST00000564617 RB1CC1Q8TDY2 1594 aa21.85■■□□□ 1.09
IRF8-205ENST00000564617 DNAJC5BQ9UF47 199 aa21.8■■□□□ 1.08
IRF8-205ENST00000564617 NACADO15069 1562 aa21.66■■□□□ 1.06
IRF8-205ENST00000564617 DCAF8L2P0C7V8 631 aa21.62■■□□□ 1.05
IRF8-205ENST00000564617 MYO15BQ96JP2 1530 aa21.58■■□□□ 1.04
IRF8-205ENST00000564617 SHROOM4Q9ULL8 1493 aa21.54■■□□□ 1.04
IRF8-205ENST00000564617 PABPN1Q86U42 306 aaKnown RBP eCLIP21.49■■□□□ 1.03
IRF8-205ENST00000564617 UNC13AQ9UPW8 1703 aa21.35■■□□□ 1.01
IRF8-205ENST00000564617 BICRAQ9NZM4 1560 aa21.27■□□□□ 0.99
IRF8-205ENST00000564617 SUPT5HO00267 1087 aaKnown RBP20.97■□□□□ 0.95
IRF8-205ENST00000564617 SCRIBQ14160 1630 aa20.96■□□□□ 0.95
IRF8-205ENST00000564617 CC2D2AQ9P2K1 1620 aa20.82■□□□□ 0.92
IRF8-205ENST00000564617 CECR2Q9BXF3 1484 aa20.8■□□□□ 0.92
IRF8-205ENST00000564617 EIF4G1Q04637 1599 aaKnown RBP20.74■□□□□ 0.91
IRF8-205ENST00000564617 RSF1Q96T23 1441 aaPredicted RBP20.53■□□□□ 0.88
IRF8-205ENST00000564617 BAZ1AQ9NRL2 1556 aaPredicted RBP20.4■□□□□ 0.86
IRF8-205ENST00000564617 MROH2BQ7Z745 1585 aa20.28■□□□□ 0.84
IRF8-205ENST00000564617 CHIC1Q5VXU3 224 aa20.25■□□□□ 0.83
IRF8-205ENST00000564617 SMARCA4P51532 1647 aa20.17■□□□□ 0.82
IRF8-205ENST00000564617 WIZO95785 1651 aa20.1■□□□□ 0.81
IRF8-205ENST00000564617 DNAJC5Q9H3Z4 198 aa20.07■□□□□ 0.8
IRF8-205ENST00000564617 TOP2AP11388 1531 aaKnown RBP20.05■□□□□ 0.8
IRF8-205ENST00000564617 NCAPD3P42695 1498 aa20.01■□□□□ 0.79
IRF8-205ENST00000564617 PEG3Q9GZU2 1588 aa19.98■□□□□ 0.79
IRF8-205ENST00000564617 ATAD2BQ9ULI0 1458 aa19.95■□□□□ 0.78
IRF8-205ENST00000564617 ERCC6Q03468 1493 aa19.93■□□□□ 0.78
IRF8-205ENST00000564617 CUX2O14529 1486 aa19.91■□□□□ 0.78
IRF8-205ENST00000564617 SMARCA2P51531 1590 aa19.88■□□□□ 0.77
IRF8-205ENST00000564617 HMGXB3Q12766 1538 aa19.86■□□□□ 0.77
IRF8-205ENST00000564617 TRIM41Q8WV44 630 aa19.81■□□□□ 0.76
IRF8-205ENST00000564617 NESP48681 1621 aa19.8■□□□□ 0.76
IRF8-205ENST00000564617 CCDC88BA6NC98 1476 aa19.78■□□□□ 0.76
IRF8-205ENST00000564617 BAZ1BQ9UIG0 1483 aaKnown RBP19.76■□□□□ 0.75
IRF8-205ENST00000564617 THOC2Q8NI27 1593 aaKnown RBP19.6■□□□□ 0.73
IRF8-205ENST00000564617 LAMC3Q9Y6N6 1575 aa19.57■□□□□ 0.72
IRF8-205ENST00000564617 KIF21AQ7Z4S6 1674 aa19.5■□□□□ 0.71
IRF8-205ENST00000564617 PDS5BQ9NTI5 1447 aa19.48■□□□□ 0.71
IRF8-205ENST00000564617 EEA1Q15075 1411 aa19.42■□□□□ 0.7
IRF8-205ENST00000564617 CADPSQ9ULU8 1353 aa19.4■□□□□ 0.7
IRF8-205ENST00000564617 LOC105371045A0A1W2PR82 267 aa19.38■□□□□ 0.69
IRF8-205ENST00000564617 ABCC8Q09428 1581 aa19.37■□□□□ 0.69
IRF8-205ENST00000564617 WRNQ14191 1432 aaPredicted RBP eCLIP19.37■□□□□ 0.69
IRF8-205ENST00000564617 MRC2Q9UBG0 1479 aa19.35■□□□□ 0.69
IRF8-205ENST00000564617 WDR62O43379 1518 aa19.3■□□□□ 0.68
IRF8-205ENST00000564617 FAM9AQ8IZU1 332 aaPredicted RBP19.29■□□□□ 0.68
IRF8-205ENST00000564617 CFTRP13569 1480 aa19.24■□□□□ 0.67
IRF8-205ENST00000564617 CEP164Q9UPV0 1460 aa19.23■□□□□ 0.67
IRF8-205ENST00000564617 FANCD2Q9BXW9 1451 aa19.21■□□□□ 0.67
IRF8-205ENST00000564617 SYNJ1O43426 1573 aa19.16■□□□□ 0.66
IRF8-205ENST00000564617 TOP2BQ02880 1626 aa19.16■□□□□ 0.66
IRF8-205ENST00000564617 CSRNP3Q8WYN3 585 aa19.15■□□□□ 0.66
IRF8-205ENST00000564617 PRDM2Q13029 1718 aa19.14■□□□□ 0.66
IRF8-205ENST00000564617 BIVM-ERCC5R4GMW8 1640 aa19.13■□□□□ 0.65
IRF8-205ENST00000564617 SOGA1O94964 1423 aa19.1■□□□□ 0.65
IRF8-205ENST00000564617 URB2Q14146 1524 aaKnown RBP19.07■□□□□ 0.64
IRF8-205ENST00000564617 GOLGA3Q08378 1498 aa19.05■□□□□ 0.64
IRF8-205ENST00000564617 TNIKQ9UKE5 1360 aa19.05■□□□□ 0.64
IRF8-205ENST00000564617 KIF21BO75037 1637 aa19■□□□□ 0.63
IRF8-205ENST00000564617 TRIM26Q12899 539 aaPredicted RBP18.98■□□□□ 0.63
IRF8-205ENST00000564617 OSCARQ8IYS5 282 aa18.97■□□□□ 0.63
IRF8-205ENST00000564617 CUX1P39880 1505 aa18.96■□□□□ 0.63
IRF8-205ENST00000564617 RUSC2Q8N2Y8 1516 aa18.94■□□□□ 0.62
IRF8-205ENST00000564617 KIF27Q86VH2 1401 aa18.92■□□□□ 0.62
IRF8-205ENST00000564617 UBTFP17480 764 aaKnown RBP18.92■□□□□ 0.62
IRF8-205ENST00000564617 EHMT2Q96KQ7 1210 aa18.91■□□□□ 0.62
IRF8-205ENST00000564617 PCGF6Q9BYE7 350 aa18.9■□□□□ 0.62
IRF8-205ENST00000564617 CEP162Q5TB80 1403 aa18.9■□□□□ 0.62
IRF8-205ENST00000564617 ZNF608Q9ULD9 1512 aaPredicted RBP18.88■□□□□ 0.61
IRF8-205ENST00000564617 ERICH3Q5RHP9 1530 aa18.86■□□□□ 0.61
IRF8-205ENST00000564617 IFT140Q96RY7 1462 aa18.84■□□□□ 0.61
IRF8-205ENST00000564617 TOPBP1Q92547 1522 aa18.82■□□□□ 0.6
IRF8-205ENST00000564617 DNMBPQ6XZF7 1577 aa18.81■□□□□ 0.6
IRF8-205ENST00000564617 PRXQ9BXM0 1461 aa18.79■□□□□ 0.6
IRF8-205ENST00000564617 RIMBP3CA6NJZ7 1639 aa18.77■□□□□ 0.6
IRF8-205ENST00000564617 RIMBP3BA6NNM3 1639 aa18.77■□□□□ 0.6
IRF8-205ENST00000564617 RIMBP3Q9UFD9 1639 aa18.77■□□□□ 0.6
IRF8-205ENST00000564617 FGD5Q6ZNL6 1462 aa18.75■□□□□ 0.59
IRF8-205ENST00000564617 EIF4G3O43432 1585 aaKnown RBP18.75■□□□□ 0.59
IRF8-205ENST00000564617 RAPGEF2Q9Y4G8 1499 aa18.73■□□□□ 0.59
IRF8-205ENST00000564617 CLIP1P30622 1438 aa18.72■□□□□ 0.59
IRF8-205ENST00000564617 ARHGEF11O15085 1522 aa18.7■□□□□ 0.58
IRF8-205ENST00000564617 HRCP23327 699 aa18.68■□□□□ 0.58
IRF8-205ENST00000564617 AQRO60306 1485 aaKnown RBP eCLIP18.67■□□□□ 0.58
IRF8-205ENST00000564617 TARBP1Q13395 1621 aaKnown RBP18.67■□□□□ 0.58
IRF8-205ENST00000564617 ABCA10Q8WWZ4 1543 aa18.65■□□□□ 0.58
IRF8-205ENST00000564617 POLA1P09884 1462 aaPredicted RBP18.63■□□□□ 0.57
IRF8-205ENST00000564617 IGF1RP08069 1367 aa18.62■□□□□ 0.57
IRF8-205ENST00000564617 CHD1O14646 1710 aa18.61■□□□□ 0.57
IRF8-205ENST00000564617 VPS8Q8N3P4 1428 aa18.61■□□□□ 0.57
IRF8-205ENST00000564617 APLP2Q06481 763 aa18.59■□□□□ 0.57
IRF8-205ENST00000564617 RAD54L2Q9Y4B4 1467 aa18.58■□□□□ 0.57
IRF8-205ENST00000564617 CARMIL1Q5VZK9 1371 aa18.58■□□□□ 0.57
IRF8-205ENST00000564617 FBLN2P98095 1184 aa18.58■□□□□ 0.56
IRF8-205ENST00000564617 CYB5RLQ6IPT4 315 aa18.57■□□□□ 0.56
IRF8-205ENST00000564617 ZEB1P37275 1124 aaPredicted RBP18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms