RNA–Protein interactions for RNA: ENST00000563147.5

TUBGCP4-204, Transcript of tubulin gamma complex associated protein 4, humanhuman

TSL 5

Gene TUBGCP4, Length 846 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP4-204ENST00000563147 CHIC1Q5VXU3 224 aa27.03■■□□□ 1.92
TUBGCP4-204ENST00000563147 AEBP2Q6ZN18 517 aaPredicted RBP26.6■■□□□ 1.85
TUBGCP4-204ENST00000563147 NISCHQ9Y2I1 1504 aa24.9■■□□□ 1.58
TUBGCP4-204ENST00000563147 PHF23Q9BUL5 403 aaPredicted RBP23.91■■□□□ 1.42
TUBGCP4-204ENST00000563147 ABCC9O60706 1549 aa22.94■■□□□ 1.26
TUBGCP4-204ENST00000563147 CCDC180Q9P1Z9 1646 aa22.56■■□□□ 1.2
TUBGCP4-204ENST00000563147 PLPPR3Q6T4P5 718 aa22.42■■□□□ 1.18
TUBGCP4-204ENST00000563147 SENP3Q9H4L4 574 aaPredicted RBP22.35■■□□□ 1.17
TUBGCP4-204ENST00000563147 DNAJC5BQ9UF47 199 aa21.92■■□□□ 1.1
TUBGCP4-204ENST00000563147 RB1CC1Q8TDY2 1594 aa21.7■■□□□ 1.06
TUBGCP4-204ENST00000563147 NACADO15069 1562 aa21.44■■□□□ 1.02
TUBGCP4-204ENST00000563147 PABPN1Q86U42 306 aaKnown RBP eCLIP21.27■■□□□ 1
TUBGCP4-204ENST00000563147 UNC13AQ9UPW8 1703 aa21.18■□□□□ 0.98
TUBGCP4-204ENST00000563147 DCAF8L2P0C7V8 631 aa21.16■□□□□ 0.98
TUBGCP4-204ENST00000563147 BICRAQ9NZM4 1560 aa21.04■□□□□ 0.96
TUBGCP4-204ENST00000563147 MYO15BQ96JP2 1530 aa21.02■□□□□ 0.96
TUBGCP4-204ENST00000563147 ADRA2BP18089 450 aa21■□□□□ 0.95
TUBGCP4-204ENST00000563147 SHROOM4Q9ULL8 1493 aa20.8■□□□□ 0.92
TUBGCP4-204ENST00000563147 CECR2Q9BXF3 1484 aa20.75■□□□□ 0.91
TUBGCP4-204ENST00000563147 PPP6R1Q9UPN7 881 aa20.74■□□□□ 0.91
TUBGCP4-204ENST00000563147 ZCCHC6Q5VYS8 1495 aaKnown RBP20.74■□□□□ 0.91
TUBGCP4-204ENST00000563147 CC2D2AQ9P2K1 1620 aa20.73■□□□□ 0.91
TUBGCP4-204ENST00000563147 KCNA4P22459 653 aa20.7■□□□□ 0.9
TUBGCP4-204ENST00000563147 DCAF1Q9Y4B6 1507 aa20.66■□□□□ 0.9
TUBGCP4-204ENST00000563147 FOXD1Q16676 465 aa20.65■□□□□ 0.9
TUBGCP4-204ENST00000563147 EHMT2Q96KQ7 1210 aa20.6■□□□□ 0.89
TUBGCP4-204ENST00000563147 EIF4G1Q04637 1599 aaKnown RBP20.58■□□□□ 0.88
TUBGCP4-204ENST00000563147 DNAJC5Q9H3Z4 198 aa20.54■□□□□ 0.88
TUBGCP4-204ENST00000563147 SCRIBQ14160 1630 aa20.46■□□□□ 0.87
TUBGCP4-204ENST00000563147 CUX2O14529 1486 aa20.04■□□□□ 0.8
TUBGCP4-204ENST00000563147 PPP4R3CPQ6ZMV5 832 aa19.92■□□□□ 0.78
TUBGCP4-204ENST00000563147 SLC4A1APQ9BWU0 796 aaKnown RBP19.9■□□□□ 0.78
TUBGCP4-204ENST00000563147 ERCC6Q03468 1493 aa19.87■□□□□ 0.77
TUBGCP4-204ENST00000563147 CSRNP3Q8WYN3 585 aa19.87■□□□□ 0.77
TUBGCP4-204ENST00000563147 NCAPD3P42695 1498 aa19.79■□□□□ 0.76
TUBGCP4-204ENST00000563147 PIAS4Q8N2W9 510 aaPredicted RBP19.72■□□□□ 0.75
TUBGCP4-204ENST00000563147 NCBP3Q53F19 620 aaKnown RBP19.68■□□□□ 0.74
TUBGCP4-204ENST00000563147 ATAD2BQ9ULI0 1458 aa19.64■□□□□ 0.73
TUBGCP4-204ENST00000563147 HMGXB3Q12766 1538 aa19.6■□□□□ 0.73
TUBGCP4-204ENST00000563147 SMARCA2P51531 1590 aa19.59■□□□□ 0.73
TUBGCP4-204ENST00000563147 NESP48681 1621 aa19.57■□□□□ 0.72
TUBGCP4-204ENST00000563147 SMARCA4P51532 1647 aa19.51■□□□□ 0.71
TUBGCP4-204ENST00000563147 THOC2Q8NI27 1593 aaKnown RBP19.49■□□□□ 0.71
TUBGCP4-204ENST00000563147 BAZ1BQ9UIG0 1483 aaKnown RBP19.43■□□□□ 0.7
TUBGCP4-204ENST00000563147 LAMC3Q9Y6N6 1575 aa19.42■□□□□ 0.7
TUBGCP4-204ENST00000563147 NPM3O75607 178 aaKnown RBP19.42■□□□□ 0.7
TUBGCP4-204ENST00000563147 TRIM41Q8WV44 630 aa19.39■□□□□ 0.69
TUBGCP4-204ENST00000563147 BAZ1AQ9NRL2 1556 aaPredicted RBP19.36■□□□□ 0.69
TUBGCP4-204ENST00000563147 PEG3Q9GZU2 1588 aa19.35■□□□□ 0.69
TUBGCP4-204ENST00000563147 KIF21AQ7Z4S6 1674 aa19.33■□□□□ 0.68
TUBGCP4-204ENST00000563147 PDS5BQ9NTI5 1447 aa19.33■□□□□ 0.68
TUBGCP4-204ENST00000563147 MROH2BQ7Z745 1585 aa19.18■□□□□ 0.66
TUBGCP4-204ENST00000563147 MRC2Q9UBG0 1479 aa19.17■□□□□ 0.66
TUBGCP4-204ENST00000563147 CADPSQ9ULU8 1353 aa19.16■□□□□ 0.66
TUBGCP4-204ENST00000563147 WDR62O43379 1518 aa19.14■□□□□ 0.65
TUBGCP4-204ENST00000563147 CNKSR2Q8WXI2 1034 aa19.1■□□□□ 0.65
TUBGCP4-204ENST00000563147 ZBTB22O15209 634 aa19.08■□□□□ 0.64
TUBGCP4-204ENST00000563147 OSCARQ8IYS5 282 aa19.03■□□□□ 0.64
TUBGCP4-204ENST00000563147 CEP164Q9UPV0 1460 aa19■□□□□ 0.63
TUBGCP4-204ENST00000563147 WIZO95785 1651 aa18.99■□□□□ 0.63
TUBGCP4-204ENST00000563147 SCAF1Q9H7N4 1312 aaKnown RBP18.97■□□□□ 0.63
TUBGCP4-204ENST00000563147 RSF1Q96T23 1441 aaPredicted RBP18.94■□□□□ 0.62
TUBGCP4-204ENST00000563147 FANCD2Q9BXW9 1451 aa18.93■□□□□ 0.62
TUBGCP4-204ENST00000563147 CFTRP13569 1480 aa18.84■□□□□ 0.61
TUBGCP4-204ENST00000563147 RIMBP3CA6NJZ7 1639 aa18.81■□□□□ 0.6
TUBGCP4-204ENST00000563147 RIMBP3BA6NNM3 1639 aa18.81■□□□□ 0.6
TUBGCP4-204ENST00000563147 RIMBP3Q9UFD9 1639 aa18.81■□□□□ 0.6
TUBGCP4-204ENST00000563147 URB2Q14146 1524 aaKnown RBP18.79■□□□□ 0.6
TUBGCP4-204ENST00000563147 TOP2AP11388 1531 aaKnown RBP18.76■□□□□ 0.59
TUBGCP4-204ENST00000563147 FOXD4L1Q9NU39 408 aa18.72■□□□□ 0.59
TUBGCP4-204ENST00000563147 ARHGEF11O15085 1522 aa18.7■□□□□ 0.58
TUBGCP4-204ENST00000563147 IFT140Q96RY7 1462 aa18.65■□□□□ 0.58
TUBGCP4-204ENST00000563147 PRDM2Q13029 1718 aa18.63■□□□□ 0.57
TUBGCP4-204ENST00000563147 ZNF608Q9ULD9 1512 aaPredicted RBP18.62■□□□□ 0.57
TUBGCP4-204ENST00000563147 CYB5RLQ6IPT4 315 aa18.58■□□□□ 0.56
TUBGCP4-204ENST00000563147 MSH5O43196 834 aa18.57■□□□□ 0.56
TUBGCP4-204ENST00000563147 CCDC88BA6NC98 1476 aa18.54■□□□□ 0.56
TUBGCP4-204ENST00000563147 MAPK8IP2Q13387 824 aaPredicted RBP18.54■□□□□ 0.56
TUBGCP4-204ENST00000563147 TRHP20396 242 aaPredicted RBP18.53■□□□□ 0.56
TUBGCP4-204ENST00000563147 TOPBP1Q92547 1522 aa18.52■□□□□ 0.56
TUBGCP4-204ENST00000563147 EIF4G3O43432 1585 aaKnown RBP18.51■□□□□ 0.55
TUBGCP4-204ENST00000563147 ABCC8Q09428 1581 aa18.5■□□□□ 0.55
TUBGCP4-204ENST00000563147 ARAP1Q96P48 1450 aa18.48■□□□□ 0.55
TUBGCP4-204ENST00000563147 CHD1O14646 1710 aa18.47■□□□□ 0.55
TUBGCP4-204ENST00000563147 RNF216Q9NWF9 866 aaPredicted RBP18.45■□□□□ 0.54
TUBGCP4-204ENST00000563147 DNMBPQ6XZF7 1577 aa18.42■□□□□ 0.54
TUBGCP4-204ENST00000563147 AQRO60306 1485 aaKnown RBP eCLIP18.39■□□□□ 0.54
TUBGCP4-204ENST00000563147 TARBP1Q13395 1621 aaKnown RBP18.38■□□□□ 0.53
TUBGCP4-204ENST00000563147 FBLN2P98095 1184 aa18.37■□□□□ 0.53
TUBGCP4-204ENST00000563147 SUPT5HO00267 1087 aaKnown RBP18.31■□□□□ 0.52
TUBGCP4-204ENST00000563147 POLA1P09884 1462 aaPredicted RBP18.29■□□□□ 0.52
TUBGCP4-204ENST00000563147 CLASP1Q7Z460 1538 aa18.25■□□□□ 0.51
TUBGCP4-204ENST00000563147 SLC24A1O60721 1099 aa18.23■□□□□ 0.51
TUBGCP4-204ENST00000563147 WDR97A6NE52 1622 aa18.23■□□□□ 0.51
TUBGCP4-204ENST00000563147 SYNJ1O43426 1573 aa18.22■□□□□ 0.51
TUBGCP4-204ENST00000563147 RTN4Q9NQC3 1192 aaKnown RBP18.22■□□□□ 0.51
TUBGCP4-204ENST00000563147 RAD54L2Q9Y4B4 1467 aa18.21■□□□□ 0.51
TUBGCP4-204ENST00000563147 TDRD9Q8NDG6 1382 aaKnown RBP18.21■□□□□ 0.51
TUBGCP4-204ENST00000563147 SOGA1O94964 1423 aa18.21■□□□□ 0.51
TUBGCP4-204ENST00000563147 SNAPC4Q5SXM2 1469 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms