RNA–Protein interactions for RNA: ENST00000561857.1

SPN-204, Transcript of sialophorin, humanhuman

Gene SPN, Length 2,077 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPN-204ENST00000561857 NISCHQ9Y2I1 1504 aa23.22■■□□□ 1.31
SPN-204ENST00000561857 AEBP2Q6ZN18 517 aaPredicted RBP22.85■■□□□ 1.25
SPN-204ENST00000561857 CHIC1Q5VXU3 224 aa22.34■■□□□ 1.17
SPN-204ENST00000561857 CCDC180Q9P1Z9 1646 aa20.09■□□□□ 0.81
SPN-204ENST00000561857 PHF23Q9BUL5 403 aaPredicted RBP19.8■□□□□ 0.76
SPN-204ENST00000561857 ZCCHC6Q5VYS8 1495 aaKnown RBP19.6■□□□□ 0.73
SPN-204ENST00000561857 DCAF1Q9Y4B6 1507 aa19.25■□□□□ 0.67
SPN-204ENST00000561857 SENP3Q9H4L4 574 aaPredicted RBP19.15■□□□□ 0.66
SPN-204ENST00000561857 SHROOM4Q9ULL8 1493 aa19.15■□□□□ 0.66
SPN-204ENST00000561857 DCAF8L2P0C7V8 631 aa19.11■□□□□ 0.65
SPN-204ENST00000561857 SLC24A1O60721 1099 aa18.91■□□□□ 0.62
SPN-204ENST00000561857 ABCC9O60706 1549 aa18.91■□□□□ 0.62
SPN-204ENST00000561857 MYO15BQ96JP2 1530 aa18.86■□□□□ 0.61
SPN-204ENST00000561857 SUPT5HO00267 1087 aaKnown RBP18.65■□□□□ 0.58
SPN-204ENST00000561857 NACADO15069 1562 aa18.65■□□□□ 0.58
SPN-204ENST00000561857 SCRIBQ14160 1630 aa18.46■□□□□ 0.55
SPN-204ENST00000561857 RB1CC1Q8TDY2 1594 aa18.44■□□□□ 0.54
SPN-204ENST00000561857 RSF1Q96T23 1441 aaPredicted RBP18.16■□□□□ 0.5
SPN-204ENST00000561857 PLPPR3Q6T4P5 718 aa18.16■□□□□ 0.5
SPN-204ENST00000561857 UNC13AQ9UPW8 1703 aa18.1■□□□□ 0.49
SPN-204ENST00000561857 CECR2Q9BXF3 1484 aa17.96■□□□□ 0.47
SPN-204ENST00000561857 BICRAQ9NZM4 1560 aa17.95■□□□□ 0.46
SPN-204ENST00000561857 MROH2BQ7Z745 1585 aa17.93■□□□□ 0.46
SPN-204ENST00000561857 PABPN1Q86U42 306 aaKnown RBP eCLIP17.92■□□□□ 0.46
SPN-204ENST00000561857 BAZ1AQ9NRL2 1556 aaPredicted RBP17.91■□□□□ 0.46
SPN-204ENST00000561857 FOXD1Q16676 465 aa17.9■□□□□ 0.46
SPN-204ENST00000561857 WIZO95785 1651 aa17.82■□□□□ 0.44
SPN-204ENST00000561857 SMARCA4P51532 1647 aa17.76■□□□□ 0.43
SPN-204ENST00000561857 EHMT2Q96KQ7 1210 aa17.72■□□□□ 0.43
SPN-204ENST00000561857 TOP2AP11388 1531 aaKnown RBP17.67■□□□□ 0.42
SPN-204ENST00000561857 EIF4G1Q04637 1599 aaKnown RBP17.57■□□□□ 0.4
SPN-204ENST00000561857 PEG3Q9GZU2 1588 aa17.56■□□□□ 0.4
SPN-204ENST00000561857 TRIM41Q8WV44 630 aa17.55■□□□□ 0.4
SPN-204ENST00000561857 SMARCA2P51531 1590 aa17.51■□□□□ 0.39
SPN-204ENST00000561857 CCDC88BA6NC98 1476 aa17.46■□□□□ 0.39
SPN-204ENST00000561857 PPP6R1Q9UPN7 881 aa17.46■□□□□ 0.39
SPN-204ENST00000561857 ADRA2BP18089 450 aa17.43■□□□□ 0.38
SPN-204ENST00000561857 LOC105371045A0A1W2PR82 267 aa17.41■□□□□ 0.38
SPN-204ENST00000561857 ATAD2BQ9ULI0 1458 aa17.41■□□□□ 0.38
SPN-204ENST00000561857 DAXXQ9UER7 740 aaPredicted RBP17.3■□□□□ 0.36
SPN-204ENST00000561857 BAZ1BQ9UIG0 1483 aaKnown RBP17.27■□□□□ 0.35
SPN-204ENST00000561857 NCAPD3P42695 1498 aa17.25■□□□□ 0.35
SPN-204ENST00000561857 ABCC8Q09428 1581 aa17.23■□□□□ 0.35
SPN-204ENST00000561857 HMGXB3Q12766 1538 aa17.2■□□□□ 0.34
SPN-204ENST00000561857 FAM9AQ8IZU1 332 aaPredicted RBP17.18■□□□□ 0.34
SPN-204ENST00000561857 EEA1Q15075 1411 aa17.13■□□□□ 0.33
SPN-204ENST00000561857 PCGF6Q9BYE7 350 aa17.11■□□□□ 0.33
SPN-204ENST00000561857 WRNQ14191 1432 aaPredicted RBP eCLIP17.09■□□□□ 0.33
SPN-204ENST00000561857 CC2D2AQ9P2K1 1620 aa17.08■□□□□ 0.32
SPN-204ENST00000561857 TRIM26Q12899 539 aaPredicted RBP17.05■□□□□ 0.32
SPN-204ENST00000561857 HRCP23327 699 aa17.03■□□□□ 0.32
SPN-204ENST00000561857 SYNJ1O43426 1573 aa17■□□□□ 0.31
SPN-204ENST00000561857 SOGA1O94964 1423 aa16.99■□□□□ 0.31
SPN-204ENST00000561857 CSRNP3Q8WYN3 585 aa16.93■□□□□ 0.3
SPN-204ENST00000561857 TOP2BQ02880 1626 aa16.93■□□□□ 0.3
SPN-204ENST00000561857 BIVM-ERCC5R4GMW8 1640 aa16.92■□□□□ 0.3
SPN-204ENST00000561857 TNIKQ9UKE5 1360 aa16.91■□□□□ 0.3
SPN-204ENST00000561857 CFTRP13569 1480 aa16.9■□□□□ 0.3
SPN-204ENST00000561857 PIAS4Q8N2W9 510 aaPredicted RBP16.89■□□□□ 0.29
SPN-204ENST00000561857 RUSC2Q8N2Y8 1516 aa16.89■□□□□ 0.29
SPN-204ENST00000561857 GOLGA3Q08378 1498 aa16.88■□□□□ 0.29
SPN-204ENST00000561857 KIF21BO75037 1637 aa16.88■□□□□ 0.29
SPN-204ENST00000561857 PRDM2Q13029 1718 aa16.88■□□□□ 0.29
SPN-204ENST00000561857 TTBK1Q5TCY1 1321 aaPredicted RBP16.87■□□□□ 0.29
SPN-204ENST00000561857 NCBP3Q53F19 620 aaKnown RBP16.86■□□□□ 0.29
SPN-204ENST00000561857 CEP164Q9UPV0 1460 aa16.84■□□□□ 0.29
SPN-204ENST00000561857 RTN4Q9NQC3 1192 aaKnown RBP16.84■□□□□ 0.29
SPN-204ENST00000561857 CEP162Q5TB80 1403 aa16.83■□□□□ 0.29
SPN-204ENST00000561857 MYT1Q01538 1121 aa16.82■□□□□ 0.28
SPN-204ENST00000561857 CADPSQ9ULU8 1353 aa16.8■□□□□ 0.28
SPN-204ENST00000561857 DNAJC5BQ9UF47 199 aa16.77■□□□□ 0.28
SPN-204ENST00000561857 CUX1P39880 1505 aa16.74■□□□□ 0.27
SPN-204ENST00000561857 UBTFP17480 764 aaKnown RBP16.72■□□□□ 0.27
SPN-204ENST00000561857 KCNA4P22459 653 aa16.71■□□□□ 0.27
SPN-204ENST00000561857 APLP2Q06481 763 aa16.7■□□□□ 0.26
SPN-204ENST00000561857 ERICH3Q5RHP9 1530 aa16.69■□□□□ 0.26
SPN-204ENST00000561857 ZEB1P37275 1124 aaPredicted RBP16.65■□□□□ 0.26
SPN-204ENST00000561857 NESP48681 1621 aa16.64■□□□□ 0.25
SPN-204ENST00000561857 PRXQ9BXM0 1461 aa16.64■□□□□ 0.25
SPN-204ENST00000561857 RAPGEF2Q9Y4G8 1499 aa16.64■□□□□ 0.25
SPN-204ENST00000561857 KIF27Q86VH2 1401 aa16.63■□□□□ 0.25
SPN-204ENST00000561857 CLIP1P30622 1438 aa16.6■□□□□ 0.25
SPN-204ENST00000561857 LAMC3Q9Y6N6 1575 aa16.6■□□□□ 0.25
SPN-204ENST00000561857 FANCD2Q9BXW9 1451 aa16.59■□□□□ 0.25
SPN-204ENST00000561857 PRKCSHP14314 528 aaPredicted RBP16.58■□□□□ 0.24
SPN-204ENST00000561857 PELP1Q8IZL8 1130 aaKnown RBP16.57■□□□□ 0.24
SPN-204ENST00000561857 VPS8Q8N3P4 1428 aa16.54■□□□□ 0.24
SPN-204ENST00000561857 PPARGC1BQ86YN6 1023 aaKnown RBP16.52■□□□□ 0.23
SPN-204ENST00000561857 FGD5Q6ZNL6 1462 aa16.49■□□□□ 0.23
SPN-204ENST00000561857 DNMBPQ6XZF7 1577 aa16.48■□□□□ 0.23
SPN-204ENST00000561857 PDS5BQ9NTI5 1447 aa16.47■□□□□ 0.23
SPN-204ENST00000561857 CUX2O14529 1486 aa16.45■□□□□ 0.22
SPN-204ENST00000561857 TOPBP1Q92547 1522 aa16.43■□□□□ 0.22
SPN-204ENST00000561857 AMER1Q5JTC6 1135 aaPredicted RBP16.43■□□□□ 0.22
SPN-204ENST00000561857 IGF1RP08069 1367 aa16.41■□□□□ 0.22
SPN-204ENST00000561857 ERICH6Q7L0X2 663 aa16.4■□□□□ 0.22
SPN-204ENST00000561857 URB2Q14146 1524 aaKnown RBP16.4■□□□□ 0.22
SPN-204ENST00000561857 ARAP1Q96P48 1450 aa16.39■□□□□ 0.21
SPN-204ENST00000561857 KIF21AQ7Z4S6 1674 aa16.38■□□□□ 0.21
SPN-204ENST00000561857 ABCA10Q8WWZ4 1543 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms