RNA–Protein interactions for RNA: ENST00000561102.1

AC040958.1-201, humanhuman

BASIC

Gene AC040958.1, Length 201 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC040958.1-201ENST00000561102 NISCHQ9Y2I1 1504 aa11.18□□□□□ -0.62
AC040958.1-201ENST00000561102 CCDC180Q9P1Z9 1646 aa9.67□□□□□ -0.86
AC040958.1-201ENST00000561102 ZCCHC6Q5VYS8 1495 aaKnown RBP9.53□□□□□ -0.88
AC040958.1-201ENST00000561102 DCAF1Q9Y4B6 1507 aa9.41□□□□□ -0.9
AC040958.1-201ENST00000561102 MYO15BQ96JP2 1530 aa9.2□□□□□ -0.94
AC040958.1-201ENST00000561102 ABCC9O60706 1549 aa9.18□□□□□ -0.94
AC040958.1-201ENST00000561102 DNAJC5BQ9UF47 199 aa9.11□□□□□ -0.95
AC040958.1-201ENST00000561102 SHROOM4Q9ULL8 1493 aa9.03□□□□□ -0.96
AC040958.1-201ENST00000561102 CHIC1Q5VXU3 224 aa8.89□□□□□ -0.99
AC040958.1-201ENST00000561102 SUPT5HO00267 1087 aaKnown RBP8.87□□□□□ -0.99
AC040958.1-201ENST00000561102 NACADO15069 1562 aa8.86□□□□□ -0.99
AC040958.1-201ENST00000561102 RSF1Q96T23 1441 aaPredicted RBP8.79□□□□□ -1
AC040958.1-201ENST00000561102 RB1CC1Q8TDY2 1594 aa8.78□□□□□ -1
AC040958.1-201ENST00000561102 DNAJC5Q9H3Z4 198 aa8.77□□□□□ -1.01
AC040958.1-201ENST00000561102 SCRIBQ14160 1630 aa8.71□□□□□ -1.02
AC040958.1-201ENST00000561102 HRCP23327 699 aa8.67□□□□□ -1.02
AC040958.1-201ENST00000561102 EIF4G1Q04637 1599 aaKnown RBP8.67□□□□□ -1.02
AC040958.1-201ENST00000561102 BAZ1AQ9NRL2 1556 aaPredicted RBP8.65□□□□□ -1.03
AC040958.1-201ENST00000561102 DCAF8L2P0C7V8 631 aa8.62□□□□□ -1.03
AC040958.1-201ENST00000561102 MROH2BQ7Z745 1585 aa8.59□□□□□ -1.03
AC040958.1-201ENST00000561102 CECR2Q9BXF3 1484 aa8.56□□□□□ -1.04
AC040958.1-201ENST00000561102 TOP2AP11388 1531 aaKnown RBP8.54□□□□□ -1.04
AC040958.1-201ENST00000561102 PEG3Q9GZU2 1588 aa8.52□□□□□ -1.04
AC040958.1-201ENST00000561102 SMARCA4P51532 1647 aa8.51□□□□□ -1.05
AC040958.1-201ENST00000561102 WIZO95785 1651 aa8.5□□□□□ -1.05
AC040958.1-201ENST00000561102 TRIM26Q12899 539 aaPredicted RBP8.48□□□□□ -1.05
AC040958.1-201ENST00000561102 UNC13AQ9UPW8 1703 aa8.46□□□□□ -1.06
AC040958.1-201ENST00000561102 SMARCA2P51531 1590 aa8.45□□□□□ -1.06
AC040958.1-201ENST00000561102 PABPN1Q86U42 306 aaKnown RBP eCLIP8.43□□□□□ -1.06
AC040958.1-201ENST00000561102 PCGF6Q9BYE7 350 aa8.43□□□□□ -1.06
AC040958.1-201ENST00000561102 WRNQ14191 1432 aaPredicted RBP eCLIP8.43□□□□□ -1.06
AC040958.1-201ENST00000561102 EEA1Q15075 1411 aa8.43□□□□□ -1.06
AC040958.1-201ENST00000561102 LOC105371045A0A1W2PR82 267 aa8.41□□□□□ -1.06
AC040958.1-201ENST00000561102 TRIM41Q8WV44 630 aa8.41□□□□□ -1.06
AC040958.1-201ENST00000561102 ZEB1P37275 1124 aaPredicted RBP8.4□□□□□ -1.06
AC040958.1-201ENST00000561102 BICRAQ9NZM4 1560 aa8.39□□□□□ -1.07
AC040958.1-201ENST00000561102 CCDC88BA6NC98 1476 aa8.37□□□□□ -1.07
AC040958.1-201ENST00000561102 TNIKQ9UKE5 1360 aa8.31□□□□□ -1.08
AC040958.1-201ENST00000561102 KIF21BO75037 1637 aa8.29□□□□□ -1.08
AC040958.1-201ENST00000561102 CC2D2AQ9P2K1 1620 aa8.29□□□□□ -1.08
AC040958.1-201ENST00000561102 ABCC8Q09428 1581 aa8.26□□□□□ -1.09
AC040958.1-201ENST00000561102 BAZ1BQ9UIG0 1483 aaKnown RBP8.25□□□□□ -1.09
AC040958.1-201ENST00000561102 GOLGA3Q08378 1498 aa8.24□□□□□ -1.09
AC040958.1-201ENST00000561102 ATAD2BQ9ULI0 1458 aa8.24□□□□□ -1.09
AC040958.1-201ENST00000561102 HMGXB3Q12766 1538 aa8.24□□□□□ -1.09
AC040958.1-201ENST00000561102 CEP162Q5TB80 1403 aa8.23□□□□□ -1.09
AC040958.1-201ENST00000561102 BIVM-ERCC5R4GMW8 1640 aa8.21□□□□□ -1.09
AC040958.1-201ENST00000561102 CEP164Q9UPV0 1460 aa8.21□□□□□ -1.09
AC040958.1-201ENST00000561102 PPARGC1BQ86YN6 1023 aaKnown RBP8.21□□□□□ -1.1
AC040958.1-201ENST00000561102 SYNJ1O43426 1573 aa8.2□□□□□ -1.1
AC040958.1-201ENST00000561102 TOP2BQ02880 1626 aa8.2□□□□□ -1.1
AC040958.1-201ENST00000561102 SOGA1O94964 1423 aa8.19□□□□□ -1.1
AC040958.1-201ENST00000561102 ERICH3Q5RHP9 1530 aa8.19□□□□□ -1.1
AC040958.1-201ENST00000561102 NCAPD3P42695 1498 aa8.17□□□□□ -1.1
AC040958.1-201ENST00000561102 CSRNP3Q8WYN3 585 aa8.15□□□□□ -1.1
AC040958.1-201ENST00000561102 CUX2O14529 1486 aa8.13□□□□□ -1.11
AC040958.1-201ENST00000561102 RUSC2Q8N2Y8 1516 aa8.12□□□□□ -1.11
AC040958.1-201ENST00000561102 PRXQ9BXM0 1461 aa8.12□□□□□ -1.11
AC040958.1-201ENST00000561102 VPS8Q8N3P4 1428 aa8.12□□□□□ -1.11
AC040958.1-201ENST00000561102 PRDM2Q13029 1718 aa8.1□□□□□ -1.11
AC040958.1-201ENST00000561102 FAM9AQ8IZU1 332 aaPredicted RBP8.1□□□□□ -1.11
AC040958.1-201ENST00000561102 CFTRP13569 1480 aa8.07□□□□□ -1.12
AC040958.1-201ENST00000561102 CLIP1P30622 1438 aa8.07□□□□□ -1.12
AC040958.1-201ENST00000561102 CLSPNQ9HAW4 1339 aa8.04□□□□□ -1.12
AC040958.1-201ENST00000561102 MAP3K1Q13233 1512 aa8.04□□□□□ -1.12
AC040958.1-201ENST00000561102 RAPGEF2Q9Y4G8 1499 aa8.04□□□□□ -1.12
AC040958.1-201ENST00000561102 CUX1P39880 1505 aa8.02□□□□□ -1.13
AC040958.1-201ENST00000561102 PELP1Q8IZL8 1130 aaKnown RBP7.99□□□□□ -1.13
AC040958.1-201ENST00000561102 RRBP1Q9P2E9 1410 aaKnown RBP7.99□□□□□ -1.13
AC040958.1-201ENST00000561102 ARAP1Q96P48 1450 aa7.99□□□□□ -1.13
AC040958.1-201ENST00000561102 KIF27Q86VH2 1401 aa7.98□□□□□ -1.13
AC040958.1-201ENST00000561102 ERCC6Q03468 1493 aa7.96□□□□□ -1.13
AC040958.1-201ENST00000561102 CCER1Q8TC90 406 aaPredicted RBP7.95□□□□□ -1.14
AC040958.1-201ENST00000561102 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.93□□□□□ -1.14
AC040958.1-201ENST00000561102 UBTFP17480 764 aaKnown RBP7.92□□□□□ -1.14
AC040958.1-201ENST00000561102 ARHGAP35Q9NRY4 1499 aa7.92□□□□□ -1.14
AC040958.1-201ENST00000561102 SCAF1Q9H7N4 1312 aaKnown RBP7.9□□□□□ -1.14
AC040958.1-201ENST00000561102 CFAP43Q8NDM7 1665 aa7.89□□□□□ -1.15
AC040958.1-201ENST00000561102 AQRO60306 1485 aaKnown RBP eCLIP7.89□□□□□ -1.15
AC040958.1-201ENST00000561102 CADPSQ9ULU8 1353 aa7.89□□□□□ -1.15
AC040958.1-201ENST00000561102 TIAM1Q13009 1591 aa7.88□□□□□ -1.15
AC040958.1-201ENST00000561102 EFCAB5A4FU69 1503 aa7.88□□□□□ -1.15
AC040958.1-201ENST00000561102 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.88□□□□□ -1.15
AC040958.1-201ENST00000561102 ACIN1Q9UKV3 1341 aaKnown RBP7.88□□□□□ -1.15
AC040958.1-201ENST00000561102 ZNF316A6NFI3 1004 aaPredicted RBP7.88□□□□□ -1.15
AC040958.1-201ENST00000561102 DIEXFQ68CQ4 756 aaKnown RBP7.87□□□□□ -1.15
AC040958.1-201ENST00000561102 DNMBPQ6XZF7 1577 aa7.87□□□□□ -1.15
AC040958.1-201ENST00000561102 ABCA10Q8WWZ4 1543 aa7.87□□□□□ -1.15
AC040958.1-201ENST00000561102 IGF1RP08069 1367 aa7.86□□□□□ -1.15
AC040958.1-201ENST00000561102 DHX57Q6P158 1386 aaKnown RBP7.86□□□□□ -1.15
AC040958.1-201ENST00000561102 CUL7Q14999 1698 aa7.86□□□□□ -1.15
AC040958.1-201ENST00000561102 WDR97A6NE52 1622 aa7.85□□□□□ -1.15
AC040958.1-201ENST00000561102 FGD5Q6ZNL6 1462 aa7.84□□□□□ -1.15
AC040958.1-201ENST00000561102 CENPBP07199 599 aaPredicted RBP7.84□□□□□ -1.15
AC040958.1-201ENST00000561102 AEBP2Q6ZN18 517 aaPredicted RBP7.84□□□□□ -1.15
AC040958.1-201ENST00000561102 FHAD1B1AJZ9 1412 aa7.84□□□□□ -1.15
AC040958.1-201ENST00000561102 THOC2Q8NI27 1593 aaKnown RBP7.84□□□□□ -1.15
AC040958.1-201ENST00000561102 CCNB3Q8WWL7 1395 aa7.83□□□□□ -1.16
AC040958.1-201ENST00000561102 FYCO1Q9BQS8 1478 aa7.82□□□□□ -1.16
AC040958.1-201ENST00000561102 EHMT2Q96KQ7 1210 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms