RNA–Protein interactions for RNA: ENST00000560279.5

TTC23-216, Transcript of tetratricopeptide repeat domain 23, humanhuman

TSL 4

Gene TTC23, Length 666 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC23-216ENST00000560279 AEBP2Q6ZN18 517 aaPredicted RBP29.41■■■□□ 2.3
TTC23-216ENST00000560279 CHIC1Q5VXU3 224 aa28.22■■■□□ 2.11
TTC23-216ENST00000560279 NISCHQ9Y2I1 1504 aa25.66■■□□□ 1.7
TTC23-216ENST00000560279 SENP3Q9H4L4 574 aaPredicted RBP25.14■■□□□ 1.62
TTC23-216ENST00000560279 PHF23Q9BUL5 403 aaPredicted RBP24.84■■□□□ 1.57
TTC23-216ENST00000560279 FOXD1Q16676 465 aa23.35■■□□□ 1.33
TTC23-216ENST00000560279 ABCC9O60706 1549 aa23.05■■□□□ 1.28
TTC23-216ENST00000560279 CCDC180Q9P1Z9 1646 aa22.95■■□□□ 1.26
TTC23-216ENST00000560279 PLPPR3Q6T4P5 718 aa22.7■■□□□ 1.22
TTC23-216ENST00000560279 PPP6R1Q9UPN7 881 aa22■■□□□ 1.11
TTC23-216ENST00000560279 ADRA2BP18089 450 aa21.96■■□□□ 1.11
TTC23-216ENST00000560279 DCAF8L2P0C7V8 631 aa21.91■■□□□ 1.1
TTC23-216ENST00000560279 RB1CC1Q8TDY2 1594 aa21.91■■□□□ 1.1
TTC23-216ENST00000560279 PIAS4Q8N2W9 510 aaPredicted RBP21.9■■□□□ 1.1
TTC23-216ENST00000560279 MSH5O43196 834 aa21.83■■□□□ 1.09
TTC23-216ENST00000560279 NACADO15069 1562 aa21.74■■□□□ 1.07
TTC23-216ENST00000560279 DNAJC5BQ9UF47 199 aa21.53■■□□□ 1.04
TTC23-216ENST00000560279 PABPN1Q86U42 306 aaKnown RBP eCLIP21.52■■□□□ 1.04
TTC23-216ENST00000560279 MYO15BQ96JP2 1530 aa21.39■■□□□ 1.02
TTC23-216ENST00000560279 UNC13AQ9UPW8 1703 aa21.27■■□□□ 1
TTC23-216ENST00000560279 ZCCHC6Q5VYS8 1495 aaKnown RBP21.25■□□□□ 0.99
TTC23-216ENST00000560279 BICRAQ9NZM4 1560 aa21.17■□□□□ 0.98
TTC23-216ENST00000560279 DCAF1Q9Y4B6 1507 aa21.14■□□□□ 0.98
TTC23-216ENST00000560279 SCRIBQ14160 1630 aa21.01■□□□□ 0.95
TTC23-216ENST00000560279 SHROOM4Q9ULL8 1493 aa20.93■□□□□ 0.94
TTC23-216ENST00000560279 POTEDQ86YR6 584 aa20.84■□□□□ 0.93
TTC23-216ENST00000560279 CECR2Q9BXF3 1484 aa20.75■□□□□ 0.91
TTC23-216ENST00000560279 CC2D2AQ9P2K1 1620 aa20.75■□□□□ 0.91
TTC23-216ENST00000560279 EIF4G1Q04637 1599 aaKnown RBP20.71■□□□□ 0.91
TTC23-216ENST00000560279 SCAF1Q9H7N4 1312 aaKnown RBP20.21■□□□□ 0.83
TTC23-216ENST00000560279 MAPK8IP2Q13387 824 aaPredicted RBP20.09■□□□□ 0.81
TTC23-216ENST00000560279 NCAPD3P42695 1498 aa20.06■□□□□ 0.8
TTC23-216ENST00000560279 ATAD2BQ9ULI0 1458 aa20.03■□□□□ 0.8
TTC23-216ENST00000560279 SMARCA2P51531 1590 aa20■□□□□ 0.79
TTC23-216ENST00000560279 SMARCA4P51532 1647 aa19.99■□□□□ 0.79
TTC23-216ENST00000560279 ERCC6Q03468 1493 aa19.96■□□□□ 0.79
TTC23-216ENST00000560279 DMRT2Q9Y5R5 561 aa19.95■□□□□ 0.78
TTC23-216ENST00000560279 BAZ1AQ9NRL2 1556 aaPredicted RBP19.94■□□□□ 0.78
TTC23-216ENST00000560279 PPP4R3CPQ6ZMV5 832 aa19.91■□□□□ 0.78
TTC23-216ENST00000560279 HMGXB3Q12766 1538 aa19.91■□□□□ 0.78
TTC23-216ENST00000560279 BAZ1BQ9UIG0 1483 aaKnown RBP19.89■□□□□ 0.77
TTC23-216ENST00000560279 CUX2O14529 1486 aa19.8■□□□□ 0.76
TTC23-216ENST00000560279 DNAJC5Q9H3Z4 198 aa19.78■□□□□ 0.76
TTC23-216ENST00000560279 MROH2BQ7Z745 1585 aa19.78■□□□□ 0.76
TTC23-216ENST00000560279 NESP48681 1621 aa19.76■□□□□ 0.75
TTC23-216ENST00000560279 PEG3Q9GZU2 1588 aa19.74■□□□□ 0.75
TTC23-216ENST00000560279 LAMC3Q9Y6N6 1575 aa19.61■□□□□ 0.73
TTC23-216ENST00000560279 PDS5BQ9NTI5 1447 aa19.59■□□□□ 0.73
TTC23-216ENST00000560279 WIZO95785 1651 aa19.53■□□□□ 0.72
TTC23-216ENST00000560279 CADPSQ9ULU8 1353 aa19.52■□□□□ 0.72
TTC23-216ENST00000560279 CNKSR2Q8WXI2 1034 aa19.5■□□□□ 0.71
TTC23-216ENST00000560279 THOC2Q8NI27 1593 aaKnown RBP19.48■□□□□ 0.71
TTC23-216ENST00000560279 KIF21AQ7Z4S6 1674 aa19.46■□□□□ 0.71
TTC23-216ENST00000560279 RSF1Q96T23 1441 aaPredicted RBP19.4■□□□□ 0.7
TTC23-216ENST00000560279 MRC2Q9UBG0 1479 aa19.37■□□□□ 0.69
TTC23-216ENST00000560279 CEP164Q9UPV0 1460 aa19.33■□□□□ 0.68
TTC23-216ENST00000560279 HOXD11P31277 338 aaPredicted RBP19.32■□□□□ 0.68
TTC23-216ENST00000560279 TOP2AP11388 1531 aaKnown RBP19.3■□□□□ 0.68
TTC23-216ENST00000560279 FANCD2Q9BXW9 1451 aa19.29■□□□□ 0.68
TTC23-216ENST00000560279 NCBP3Q53F19 620 aaKnown RBP19.28■□□□□ 0.68
TTC23-216ENST00000560279 RNF216Q9NWF9 866 aaPredicted RBP19.26■□□□□ 0.67
TTC23-216ENST00000560279 WDR62O43379 1518 aa19.25■□□□□ 0.67
TTC23-216ENST00000560279 CFTRP13569 1480 aa19.25■□□□□ 0.67
TTC23-216ENST00000560279 DCAF8L1A6NGE4 600 aa19.15■□□□□ 0.66
TTC23-216ENST00000560279 CCDC88BA6NC98 1476 aa19.1■□□□□ 0.65
TTC23-216ENST00000560279 URB2Q14146 1524 aaKnown RBP19.09■□□□□ 0.65
TTC23-216ENST00000560279 TRIM41Q8WV44 630 aa19.07■□□□□ 0.64
TTC23-216ENST00000560279 OSCARQ8IYS5 282 aa19.02■□□□□ 0.64
TTC23-216ENST00000560279 PRDM2Q13029 1718 aa18.98■□□□□ 0.63
TTC23-216ENST00000560279 IFT140Q96RY7 1462 aa18.93■□□□□ 0.62
TTC23-216ENST00000560279 NPM3O75607 178 aaKnown RBP18.91■□□□□ 0.62
TTC23-216ENST00000560279 TOPBP1Q92547 1522 aa18.9■□□□□ 0.62
TTC23-216ENST00000560279 ABCC8Q09428 1581 aa18.9■□□□□ 0.62
TTC23-216ENST00000560279 ZNF608Q9ULD9 1512 aaPredicted RBP18.86■□□□□ 0.61
TTC23-216ENST00000560279 DNMBPQ6XZF7 1577 aa18.83■□□□□ 0.6
TTC23-216ENST00000560279 SUPT5HO00267 1087 aaKnown RBP18.77■□□□□ 0.6
TTC23-216ENST00000560279 FBLN2P98095 1184 aa18.76■□□□□ 0.59
TTC23-216ENST00000560279 KCNA4P22459 653 aa18.74■□□□□ 0.59
TTC23-216ENST00000560279 EIF4G3O43432 1585 aaKnown RBP18.73■□□□□ 0.59
TTC23-216ENST00000560279 AQRO60306 1485 aaKnown RBP eCLIP18.73■□□□□ 0.59
TTC23-216ENST00000560279 POLA1P09884 1462 aaPredicted RBP18.71■□□□□ 0.59
TTC23-216ENST00000560279 SOGA1O94964 1423 aa18.7■□□□□ 0.58
TTC23-216ENST00000560279 RAD54L2Q9Y4B4 1467 aa18.67■□□□□ 0.58
TTC23-216ENST00000560279 TARBP1Q13395 1621 aaKnown RBP18.67■□□□□ 0.58
TTC23-216ENST00000560279 TDRD9Q8NDG6 1382 aaKnown RBP18.66■□□□□ 0.58
TTC23-216ENST00000560279 RIMBP3CA6NJZ7 1639 aa18.63■□□□□ 0.57
TTC23-216ENST00000560279 RIMBP3BA6NNM3 1639 aa18.63■□□□□ 0.57
TTC23-216ENST00000560279 RIMBP3Q9UFD9 1639 aa18.63■□□□□ 0.57
TTC23-216ENST00000560279 FGD5Q6ZNL6 1462 aa18.62■□□□□ 0.57
TTC23-216ENST00000560279 ARHGEF11O15085 1522 aa18.6■□□□□ 0.57
TTC23-216ENST00000560279 RNF39Q9H2S5 420 aa18.6■□□□□ 0.57
TTC23-216ENST00000560279 CYB5RLQ6IPT4 315 aa18.59■□□□□ 0.57
TTC23-216ENST00000560279 CHMP7Q8WUX9 453 aaPredicted RBP18.59■□□□□ 0.57
TTC23-216ENST00000560279 CACNB1Q02641 598 aaPredicted RBP18.58■□□□□ 0.56
TTC23-216ENST00000560279 CUX1P39880 1505 aa18.58■□□□□ 0.56
TTC23-216ENST00000560279 CHD1O14646 1710 aa18.57■□□□□ 0.56
TTC23-216ENST00000560279 SNAPC4Q5SXM2 1469 aa18.54■□□□□ 0.56
TTC23-216ENST00000560279 GRIN2BQ13224 1484 aa18.51■□□□□ 0.55
TTC23-216ENST00000560279 WDR97A6NE52 1622 aa18.5■□□□□ 0.55
TTC23-216ENST00000560279 MAGI1Q96QZ7 1491 aaPredicted RBP18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms