RNA–Protein interactions for RNA: ENST00000560272.1

LINS1-208, Transcript of lines homolog 1, humanhuman

TSL 2

Gene LINS1, Length 558 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINS1-208ENST00000560272 AEBP2Q6ZN18 517 aaPredicted RBP17.93■□□□□ 0.46
LINS1-208ENST00000560272 CHIC1Q5VXU3 224 aa16.62■□□□□ 0.25
LINS1-208ENST00000560272 SENP3Q9H4L4 574 aaPredicted RBP15.31■□□□□ 0.04
LINS1-208ENST00000560272 PHF23Q9BUL5 403 aaPredicted RBP15.07■□□□□ 0
LINS1-208ENST00000560272 POTEDQ86YR6 584 aa14.86□□□□□ -0.03
LINS1-208ENST00000560272 NISCHQ9Y2I1 1504 aa14.85□□□□□ -0.03
LINS1-208ENST00000560272 FOXD1Q16676 465 aa14.45□□□□□ -0.1
LINS1-208ENST00000560272 MSH5O43196 834 aa13.74□□□□□ -0.21
LINS1-208ENST00000560272 CCDC180Q9P1Z9 1646 aa13.32□□□□□ -0.28
LINS1-208ENST00000560272 ABCC9O60706 1549 aa13.32□□□□□ -0.28
LINS1-208ENST00000560272 PIAS4Q8N2W9 510 aaPredicted RBP13.23□□□□□ -0.29
LINS1-208ENST00000560272 PPP6R1Q9UPN7 881 aa12.94□□□□□ -0.34
LINS1-208ENST00000560272 ADRA2BP18089 450 aa12.81□□□□□ -0.36
LINS1-208ENST00000560272 RB1CC1Q8TDY2 1594 aa12.7□□□□□ -0.38
LINS1-208ENST00000560272 NACADO15069 1562 aa12.61□□□□□ -0.39
LINS1-208ENST00000560272 DCAF8L2P0C7V8 631 aa12.56□□□□□ -0.4
LINS1-208ENST00000560272 PLPPR3Q6T4P5 718 aa12.52□□□□□ -0.41
LINS1-208ENST00000560272 MYO15BQ96JP2 1530 aa12.44□□□□□ -0.42
LINS1-208ENST00000560272 DNAJC5BQ9UF47 199 aa12.44□□□□□ -0.42
LINS1-208ENST00000560272 PABPN1Q86U42 306 aaKnown RBP eCLIP12.39□□□□□ -0.43
LINS1-208ENST00000560272 UNC13AQ9UPW8 1703 aa12.31□□□□□ -0.44
LINS1-208ENST00000560272 ZCCHC6Q5VYS8 1495 aaKnown RBP12.31□□□□□ -0.44
LINS1-208ENST00000560272 CACNB1Q02641 598 aaPredicted RBP12.3□□□□□ -0.44
LINS1-208ENST00000560272 DCAF1Q9Y4B6 1507 aa12.28□□□□□ -0.44
LINS1-208ENST00000560272 BICRAQ9NZM4 1560 aa12.27□□□□□ -0.44
LINS1-208ENST00000560272 SHROOM4Q9ULL8 1493 aa12.19□□□□□ -0.46
LINS1-208ENST00000560272 SCRIBQ14160 1630 aa12.14□□□□□ -0.47
LINS1-208ENST00000560272 DMRT2Q9Y5R5 561 aa12.05□□□□□ -0.48
LINS1-208ENST00000560272 MAPK8IP2Q13387 824 aaPredicted RBP12.04□□□□□ -0.48
LINS1-208ENST00000560272 CC2D2AQ9P2K1 1620 aa12.02□□□□□ -0.49
LINS1-208ENST00000560272 CECR2Q9BXF3 1484 aa12.02□□□□□ -0.49
LINS1-208ENST00000560272 EIF4G1Q04637 1599 aaKnown RBP12.01□□□□□ -0.49
LINS1-208ENST00000560272 RNF39Q9H2S5 420 aa11.71□□□□□ -0.53
LINS1-208ENST00000560272 NCAPD3P42695 1498 aa11.63□□□□□ -0.55
LINS1-208ENST00000560272 SCAF1Q9H7N4 1312 aaKnown RBP11.62□□□□□ -0.55
LINS1-208ENST00000560272 ATAD2BQ9ULI0 1458 aa11.59□□□□□ -0.55
LINS1-208ENST00000560272 SMARCA2P51531 1590 aa11.58□□□□□ -0.55
LINS1-208ENST00000560272 SMARCA4P51532 1647 aa11.57□□□□□ -0.56
LINS1-208ENST00000560272 HMGXB3Q12766 1538 aa11.55□□□□□ -0.56
LINS1-208ENST00000560272 BAZ1AQ9NRL2 1556 aaPredicted RBP11.55□□□□□ -0.56
LINS1-208ENST00000560272 ERCC6Q03468 1493 aa11.54□□□□□ -0.56
LINS1-208ENST00000560272 DCAF8L1A6NGE4 600 aa11.53□□□□□ -0.56
LINS1-208ENST00000560272 BAZ1BQ9UIG0 1483 aaKnown RBP11.51□□□□□ -0.57
LINS1-208ENST00000560272 CUX2O14529 1486 aa11.5□□□□□ -0.57
LINS1-208ENST00000560272 PEG3Q9GZU2 1588 aa11.47□□□□□ -0.57
LINS1-208ENST00000560272 DNAJC5Q9H3Z4 198 aa11.47□□□□□ -0.57
LINS1-208ENST00000560272 POTEHQ6S545 545 aa11.46□□□□□ -0.57
LINS1-208ENST00000560272 C1QBPQ07021 282 aaKnown RBP11.45□□□□□ -0.58
LINS1-208ENST00000560272 MROH2BQ7Z745 1585 aa11.42□□□□□ -0.58
LINS1-208ENST00000560272 NESP48681 1621 aa11.42□□□□□ -0.58
LINS1-208ENST00000560272 LAMC3Q9Y6N6 1575 aa11.37□□□□□ -0.59
LINS1-208ENST00000560272 PDS5BQ9NTI5 1447 aa11.34□□□□□ -0.59
LINS1-208ENST00000560272 HOXD11P31277 338 aaPredicted RBP11.31□□□□□ -0.6
LINS1-208ENST00000560272 THOC2Q8NI27 1593 aaKnown RBP11.31□□□□□ -0.6
LINS1-208ENST00000560272 CADPSQ9ULU8 1353 aa11.28□□□□□ -0.6
LINS1-208ENST00000560272 WIZO95785 1651 aa11.28□□□□□ -0.6
LINS1-208ENST00000560272 KIF21AQ7Z4S6 1674 aa11.26□□□□□ -0.61
LINS1-208ENST00000560272 MRC2Q9UBG0 1479 aa11.22□□□□□ -0.61
LINS1-208ENST00000560272 RSF1Q96T23 1441 aaPredicted RBP11.2□□□□□ -0.62
LINS1-208ENST00000560272 CEP164Q9UPV0 1460 aa11.19□□□□□ -0.62
LINS1-208ENST00000560272 WDR62O43379 1518 aa11.18□□□□□ -0.62
LINS1-208ENST00000560272 TOP2AP11388 1531 aaKnown RBP11.18□□□□□ -0.62
LINS1-208ENST00000560272 FANCD2Q9BXW9 1451 aa11.16□□□□□ -0.62
LINS1-208ENST00000560272 CFTRP13569 1480 aa11.15□□□□□ -0.62
LINS1-208ENST00000560272 URB2Q14146 1524 aaKnown RBP11.04□□□□□ -0.64
LINS1-208ENST00000560272 CCDC88BA6NC98 1476 aa11.03□□□□□ -0.64
LINS1-208ENST00000560272 PRDM2Q13029 1718 aa11.01□□□□□ -0.65
LINS1-208ENST00000560272 TRIM41Q8WV44 630 aa10.99□□□□□ -0.65
LINS1-208ENST00000560272 OSCARQ8IYS5 282 aa10.98□□□□□ -0.65
LINS1-208ENST00000560272 RNF216Q9NWF9 866 aaPredicted RBP10.98□□□□□ -0.65
LINS1-208ENST00000560272 IFT140Q96RY7 1462 aa10.96□□□□□ -0.65
LINS1-208ENST00000560272 ABCC8Q09428 1581 aa10.95□□□□□ -0.66
LINS1-208ENST00000560272 TOPBP1Q92547 1522 aa10.94□□□□□ -0.66
LINS1-208ENST00000560272 PPP4R3CPQ6ZMV5 832 aa10.91□□□□□ -0.66
LINS1-208ENST00000560272 DNMBPQ6XZF7 1577 aa10.9□□□□□ -0.66
LINS1-208ENST00000560272 ZNF608Q9ULD9 1512 aaPredicted RBP10.9□□□□□ -0.66
LINS1-208ENST00000560272 CNKSR2Q8WXI2 1034 aa10.87□□□□□ -0.67
LINS1-208ENST00000560272 EIF4G3O43432 1585 aaKnown RBP10.86□□□□□ -0.67
LINS1-208ENST00000560272 POLA1P09884 1462 aaPredicted RBP10.82□□□□□ -0.68
LINS1-208ENST00000560272 AQRO60306 1485 aaKnown RBP eCLIP10.81□□□□□ -0.68
LINS1-208ENST00000560272 TARBP1Q13395 1621 aaKnown RBP10.81□□□□□ -0.68
LINS1-208ENST00000560272 SOGA1O94964 1423 aa10.8□□□□□ -0.68
LINS1-208ENST00000560272 RIMBP3CA6NJZ7 1639 aa10.8□□□□□ -0.68
LINS1-208ENST00000560272 RIMBP3BA6NNM3 1639 aa10.8□□□□□ -0.68
LINS1-208ENST00000560272 RIMBP3Q9UFD9 1639 aa10.8□□□□□ -0.68
LINS1-208ENST00000560272 ARHGEF11O15085 1522 aa10.79□□□□□ -0.68
LINS1-208ENST00000560272 FBLN2P98095 1184 aa10.78□□□□□ -0.68
LINS1-208ENST00000560272 RAD54L2Q9Y4B4 1467 aa10.78□□□□□ -0.68
LINS1-208ENST00000560272 FGD5Q6ZNL6 1462 aa10.77□□□□□ -0.69
LINS1-208ENST00000560272 TDRD9Q8NDG6 1382 aaKnown RBP10.77□□□□□ -0.69
LINS1-208ENST00000560272 WDR97A6NE52 1622 aa10.76□□□□□ -0.69
LINS1-208ENST00000560272 CHD1O14646 1710 aa10.75□□□□□ -0.69
LINS1-208ENST00000560272 CUX1P39880 1505 aa10.74□□□□□ -0.69
LINS1-208ENST00000560272 SUPT5HO00267 1087 aaKnown RBP10.73□□□□□ -0.69
LINS1-208ENST00000560272 SNAPC4Q5SXM2 1469 aa10.72□□□□□ -0.69
LINS1-208ENST00000560272 CYB5RLQ6IPT4 315 aa10.71□□□□□ -0.69
LINS1-208ENST00000560272 MAGI1Q96QZ7 1491 aaPredicted RBP10.71□□□□□ -0.69
LINS1-208ENST00000560272 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.71□□□□□ -0.69
LINS1-208ENST00000560272 GRIN2BQ13224 1484 aa10.7□□□□□ -0.7
LINS1-208ENST00000560272 DSG3P32926 999 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms