RNA–Protein interactions for RNA: ENST00000560257.1

LIPC-206, Transcript of lipase C, hepatic type, humanhuman

TSL 5

Gene LIPC, Length 934 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIPC-206ENST00000560257 AEBP2Q6ZN18 517 aaPredicted RBP26.92■■□□□ 1.9
LIPC-206ENST00000560257 CHIC1Q5VXU3 224 aa26.17■■□□□ 1.78
LIPC-206ENST00000560257 PHF23Q9BUL5 403 aaPredicted RBP23.11■■□□□ 1.29
LIPC-206ENST00000560257 SENP3Q9H4L4 574 aaPredicted RBP22.7■■□□□ 1.22
LIPC-206ENST00000560257 NISCHQ9Y2I1 1504 aa21.55■■□□□ 1.04
LIPC-206ENST00000560257 PLPPR3Q6T4P5 718 aa21.19■□□□□ 0.98
LIPC-206ENST00000560257 FOXD1Q16676 465 aa21.18■□□□□ 0.98
LIPC-206ENST00000560257 PPP6R1Q9UPN7 881 aa20.42■□□□□ 0.86
LIPC-206ENST00000560257 ADRA2BP18089 450 aa20.38■□□□□ 0.85
LIPC-206ENST00000560257 PIAS4Q8N2W9 510 aaPredicted RBP19.93■□□□□ 0.78
LIPC-206ENST00000560257 MSH5O43196 834 aa19.41■□□□□ 0.7
LIPC-206ENST00000560257 CCDC180Q9P1Z9 1646 aa19.16■□□□□ 0.66
LIPC-206ENST00000560257 PPP4R3CPQ6ZMV5 832 aa18.73■□□□□ 0.59
LIPC-206ENST00000560257 MAPK8IP2Q13387 824 aaPredicted RBP18.53■□□□□ 0.56
LIPC-206ENST00000560257 SCAF1Q9H7N4 1312 aaKnown RBP18.46■□□□□ 0.55
LIPC-206ENST00000560257 ABCC9O60706 1549 aa18.38■□□□□ 0.53
LIPC-206ENST00000560257 KCNA4P22459 653 aa18.33■□□□□ 0.52
LIPC-206ENST00000560257 CNKSR2Q8WXI2 1034 aa18.16■□□□□ 0.5
LIPC-206ENST00000560257 DMRT2Q9Y5R5 561 aa18.15■□□□□ 0.5
LIPC-206ENST00000560257 NCBP3Q53F19 620 aaKnown RBP18.13■□□□□ 0.49
LIPC-206ENST00000560257 ZCCHC6Q5VYS8 1495 aaKnown RBP18.05■□□□□ 0.48
LIPC-206ENST00000560257 NPM3O75607 178 aaKnown RBP17.99■□□□□ 0.47
LIPC-206ENST00000560257 DCAF8L2P0C7V8 631 aa17.89■□□□□ 0.45
LIPC-206ENST00000560257 NACADO15069 1562 aa17.87■□□□□ 0.45
LIPC-206ENST00000560257 RB1CC1Q8TDY2 1594 aa17.86■□□□□ 0.45
LIPC-206ENST00000560257 DCAF1Q9Y4B6 1507 aa17.85■□□□□ 0.45
LIPC-206ENST00000560257 POTEDQ86YR6 584 aa17.82■□□□□ 0.44
LIPC-206ENST00000560257 RNF216Q9NWF9 866 aaPredicted RBP17.81■□□□□ 0.44
LIPC-206ENST00000560257 MYO15BQ96JP2 1530 aa17.81■□□□□ 0.44
LIPC-206ENST00000560257 HOXD11P31277 338 aaPredicted RBP17.76■□□□□ 0.43
LIPC-206ENST00000560257 SCRIBQ14160 1630 aa17.49■□□□□ 0.39
LIPC-206ENST00000560257 UNC13AQ9UPW8 1703 aa17.49■□□□□ 0.39
LIPC-206ENST00000560257 DCAF8L1A6NGE4 600 aa17.42■□□□□ 0.38
LIPC-206ENST00000560257 SLC4A1APQ9BWU0 796 aaKnown RBP17.39■□□□□ 0.37
LIPC-206ENST00000560257 DNAJC5BQ9UF47 199 aa17.33■□□□□ 0.36
LIPC-206ENST00000560257 SHROOM4Q9ULL8 1493 aa17.24■□□□□ 0.35
LIPC-206ENST00000560257 BICRAQ9NZM4 1560 aa17.22■□□□□ 0.35
LIPC-206ENST00000560257 PABPN1Q86U42 306 aaKnown RBP eCLIP17.14■□□□□ 0.33
LIPC-206ENST00000560257 SLC4A2P04920 1241 aa17.02■□□□□ 0.32
LIPC-206ENST00000560257 EHMT2Q96KQ7 1210 aa16.95■□□□□ 0.3
LIPC-206ENST00000560257 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.93■□□□□ 0.3
LIPC-206ENST00000560257 ZBTB22O15209 634 aa16.9■□□□□ 0.3
LIPC-206ENST00000560257 EIF4G1Q04637 1599 aaKnown RBP16.8■□□□□ 0.28
LIPC-206ENST00000560257 FOXD4L1Q9NU39 408 aa16.79■□□□□ 0.28
LIPC-206ENST00000560257 CSRNP3Q8WYN3 585 aa16.75■□□□□ 0.27
LIPC-206ENST00000560257 BAZ1AQ9NRL2 1556 aaPredicted RBP16.75■□□□□ 0.27
LIPC-206ENST00000560257 SMARCA4P51532 1647 aa16.73■□□□□ 0.27
LIPC-206ENST00000560257 CECR2Q9BXF3 1484 aa16.73■□□□□ 0.27
LIPC-206ENST00000560257 U3KPZ7 1027 aaPredicted RBP16.7■□□□□ 0.26
LIPC-206ENST00000560257 RNF39Q9H2S5 420 aa16.69■□□□□ 0.26
LIPC-206ENST00000560257 CC2D2AQ9P2K1 1620 aa16.66■□□□□ 0.26
LIPC-206ENST00000560257 MROH2BQ7Z745 1585 aa16.62■□□□□ 0.25
LIPC-206ENST00000560257 SMARCA2P51531 1590 aa16.55■□□□□ 0.24
LIPC-206ENST00000560257 MYCNP04198 464 aaPredicted RBP16.55■□□□□ 0.24
LIPC-206ENST00000560257 PEG3Q9GZU2 1588 aa16.51■□□□□ 0.23
LIPC-206ENST00000560257 WIZO95785 1651 aa16.51■□□□□ 0.23
LIPC-206ENST00000560257 RSF1Q96T23 1441 aaPredicted RBP16.49■□□□□ 0.23
LIPC-206ENST00000560257 ATAD2BQ9ULI0 1458 aa16.48■□□□□ 0.23
LIPC-206ENST00000560257 HMGXB3Q12766 1538 aa16.45■□□□□ 0.22
LIPC-206ENST00000560257 BAZ1BQ9UIG0 1483 aaKnown RBP16.43■□□□□ 0.22
LIPC-206ENST00000560257 C1QBPQ07021 282 aaKnown RBP16.43■□□□□ 0.22
LIPC-206ENST00000560257 NCAPD3P42695 1498 aa16.41■□□□□ 0.22
LIPC-206ENST00000560257 TOP2AP11388 1531 aaKnown RBP16.36■□□□□ 0.21
LIPC-206ENST00000560257 SUPT5HO00267 1087 aaKnown RBP16.34■□□□□ 0.21
LIPC-206ENST00000560257 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.33■□□□□ 0.2
LIPC-206ENST00000560257 HNRNPUL2Q1KMD3 747 aaKnown RBP16.33■□□□□ 0.2
LIPC-206ENST00000560257 SAMD1Q6SPF0 538 aaPredicted RBP16.31■□□□□ 0.2
LIPC-206ENST00000560257 CACNB1Q02641 598 aaPredicted RBP16.28■□□□□ 0.2
LIPC-206ENST00000560257 SPINK5Q9NQ38 1064 aaPredicted RBP16.28■□□□□ 0.2
LIPC-206ENST00000560257 ATF5Q9Y2D1 282 aaPredicted RBP16.26■□□□□ 0.19
LIPC-206ENST00000560257 CAPN15O75808 1086 aa16.16■□□□□ 0.18
LIPC-206ENST00000560257 ATXN8OSP0DMR3 200 aa16.14■□□□□ 0.17
LIPC-206ENST00000560257 APLP2Q06481 763 aa16.12■□□□□ 0.17
LIPC-206ENST00000560257 TRHP20396 242 aaPredicted RBP16.1■□□□□ 0.17
LIPC-206ENST00000560257 CCDC88BA6NC98 1476 aa16.08■□□□□ 0.16
LIPC-206ENST00000560257 LAMC3Q9Y6N6 1575 aa16.03■□□□□ 0.16
LIPC-206ENST00000560257 PRDM2Q13029 1718 aa16.02■□□□□ 0.16
LIPC-206ENST00000560257 ZNF219Q9P2Y4 722 aaPredicted RBP15.99■□□□□ 0.15
LIPC-206ENST00000560257 NESP48681 1621 aa15.96■□□□□ 0.15
LIPC-206ENST00000560257 CADPSQ9ULU8 1353 aa15.95■□□□□ 0.14
LIPC-206ENST00000560257 CFTRP13569 1480 aa15.93■□□□□ 0.14
LIPC-206ENST00000560257 ABCB7O75027 752 aa15.91■□□□□ 0.14
LIPC-206ENST00000560257 DSG3P32926 999 aa15.9■□□□□ 0.14
LIPC-206ENST00000560257 KIF21AQ7Z4S6 1674 aa15.89■□□□□ 0.13
LIPC-206ENST00000560257 ERCC6Q03468 1493 aa15.87■□□□□ 0.13
LIPC-206ENST00000560257 PDS5BQ9NTI5 1447 aa15.86■□□□□ 0.13
LIPC-206ENST00000560257 POLA2Q14181 598 aa15.83■□□□□ 0.12
LIPC-206ENST00000560257 CEP164Q9UPV0 1460 aa15.83■□□□□ 0.12
LIPC-206ENST00000560257 FANCD2Q9BXW9 1451 aa15.82■□□□□ 0.12
LIPC-206ENST00000560257 THOC2Q8NI27 1593 aaKnown RBP15.73■□□□□ 0.11
LIPC-206ENST00000560257 MRC2Q9UBG0 1479 aa15.71■□□□□ 0.11
LIPC-206ENST00000560257 ABCC8Q09428 1581 aa15.66■□□□□ 0.1
LIPC-206ENST00000560257 DNMBPQ6XZF7 1577 aa15.66■□□□□ 0.1
LIPC-206ENST00000560257 WDR62O43379 1518 aa15.65■□□□□ 0.1
LIPC-206ENST00000560257 URB2Q14146 1524 aaKnown RBP15.63■□□□□ 0.09
LIPC-206ENST00000560257 WRNQ14191 1432 aaPredicted RBP eCLIP15.61■□□□□ 0.09
LIPC-206ENST00000560257 TOPBP1Q92547 1522 aa15.6■□□□□ 0.09
LIPC-206ENST00000560257 BIVM-ERCC5R4GMW8 1640 aa15.6■□□□□ 0.09
LIPC-206ENST00000560257 CUX1P39880 1505 aa15.58■□□□□ 0.09
LIPC-206ENST00000560257 SYNJ1O43426 1573 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms