RNA–Protein interactions for RNA: ENST00000559016.1

COPS2-206, Transcript of COP9 signalosome subunit 2, humanhuman

TSL 4

Gene COPS2, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS2-206ENST00000559016 AEBP2Q6ZN18 517 aaPredicted RBP23.58■■□□□ 1.37
COPS2-206ENST00000559016 CHIC1Q5VXU3 224 aa22.34■■□□□ 1.17
COPS2-206ENST00000559016 SENP3Q9H4L4 574 aaPredicted RBP20.43■□□□□ 0.86
COPS2-206ENST00000559016 PHF23Q9BUL5 403 aaPredicted RBP20.01■□□□□ 0.79
COPS2-206ENST00000559016 NISCHQ9Y2I1 1504 aa19.2■□□□□ 0.66
COPS2-206ENST00000559016 FOXD1Q16676 465 aa18.9■□□□□ 0.62
COPS2-206ENST00000559016 MSH5O43196 834 aa18.01■□□□□ 0.47
COPS2-206ENST00000559016 POTEDQ86YR6 584 aa17.87■□□□□ 0.45
COPS2-206ENST00000559016 PLPPR3Q6T4P5 718 aa17.78■□□□□ 0.44
COPS2-206ENST00000559016 PIAS4Q8N2W9 510 aaPredicted RBP17.71■□□□□ 0.43
COPS2-206ENST00000559016 ADRA2BP18089 450 aa17.36■□□□□ 0.37
COPS2-206ENST00000559016 PPP6R1Q9UPN7 881 aa17.36■□□□□ 0.37
COPS2-206ENST00000559016 CCDC180Q9P1Z9 1646 aa16.8■□□□□ 0.28
COPS2-206ENST00000559016 SCAF1Q9H7N4 1312 aaKnown RBP16.19■□□□□ 0.18
COPS2-206ENST00000559016 ZCCHC6Q5VYS8 1495 aaKnown RBP16.15■□□□□ 0.18
COPS2-206ENST00000559016 DMRT2Q9Y5R5 561 aa16.07■□□□□ 0.16
COPS2-206ENST00000559016 DCAF1Q9Y4B6 1507 aa15.99■□□□□ 0.15
COPS2-206ENST00000559016 MAPK8IP2Q13387 824 aaPredicted RBP15.98■□□□□ 0.15
COPS2-206ENST00000559016 MYO15BQ96JP2 1530 aa15.78■□□□□ 0.12
COPS2-206ENST00000559016 DCAF8L2P0C7V8 631 aa15.65■□□□□ 0.1
COPS2-206ENST00000559016 CACNB1Q02641 598 aaPredicted RBP15.6■□□□□ 0.09
COPS2-206ENST00000559016 NACADO15069 1562 aa15.6■□□□□ 0.09
COPS2-206ENST00000559016 ABCC9O60706 1549 aa15.58■□□□□ 0.09
COPS2-206ENST00000559016 DCAF8L1A6NGE4 600 aa15.53■□□□□ 0.08
COPS2-206ENST00000559016 SHROOM4Q9ULL8 1493 aa15.52■□□□□ 0.07
COPS2-206ENST00000559016 PPP4R3CPQ6ZMV5 832 aa15.47■□□□□ 0.07
COPS2-206ENST00000559016 RB1CC1Q8TDY2 1594 aa15.41■□□□□ 0.06
COPS2-206ENST00000559016 HOXD11P31277 338 aaPredicted RBP15.36■□□□□ 0.05
COPS2-206ENST00000559016 CNKSR2Q8WXI2 1034 aa15.32■□□□□ 0.04
COPS2-206ENST00000559016 SCRIBQ14160 1630 aa15.28■□□□□ 0.04
COPS2-206ENST00000559016 RNF216Q9NWF9 866 aaPredicted RBP15.23■□□□□ 0.03
COPS2-206ENST00000559016 RNF39Q9H2S5 420 aa15.21■□□□□ 0.03
COPS2-206ENST00000559016 UNC13AQ9UPW8 1703 aa15.09■□□□□ 0.01
COPS2-206ENST00000559016 C1QBPQ07021 282 aaKnown RBP15.08■□□□□ 0
COPS2-206ENST00000559016 SUPT5HO00267 1087 aaKnown RBP15.02■□□□□ -0
COPS2-206ENST00000559016 DNAJC5BQ9UF47 199 aa14.99□□□□□ -0.01
COPS2-206ENST00000559016 NCBP3Q53F19 620 aaKnown RBP14.98□□□□□ -0.01
COPS2-206ENST00000559016 RSF1Q96T23 1441 aaPredicted RBP14.9□□□□□ -0.02
COPS2-206ENST00000559016 BICRAQ9NZM4 1560 aa14.89□□□□□ -0.03
COPS2-206ENST00000559016 BAZ1AQ9NRL2 1556 aaPredicted RBP14.85□□□□□ -0.03
COPS2-206ENST00000559016 CECR2Q9BXF3 1484 aa14.82□□□□□ -0.04
COPS2-206ENST00000559016 MROH2BQ7Z745 1585 aa14.78□□□□□ -0.04
COPS2-206ENST00000559016 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.76□□□□□ -0.05
COPS2-206ENST00000559016 SMARCA4P51532 1647 aa14.74□□□□□ -0.05
COPS2-206ENST00000559016 WIZO95785 1651 aa14.68□□□□□ -0.06
COPS2-206ENST00000559016 PABPN1Q86U42 306 aaKnown RBP eCLIP14.66□□□□□ -0.06
COPS2-206ENST00000559016 PEG3Q9GZU2 1588 aa14.62□□□□□ -0.07
COPS2-206ENST00000559016 KCNA4P22459 653 aa14.59□□□□□ -0.07
COPS2-206ENST00000559016 TOP2AP11388 1531 aaKnown RBP14.58□□□□□ -0.08
COPS2-206ENST00000559016 NPM3O75607 178 aaKnown RBP14.53□□□□□ -0.08
COPS2-206ENST00000559016 SMARCA2P51531 1590 aa14.51□□□□□ -0.09
COPS2-206ENST00000559016 ATAD2BQ9ULI0 1458 aa14.44□□□□□ -0.1
COPS2-206ENST00000559016 EIF4G1Q04637 1599 aaKnown RBP14.43□□□□□ -0.1
COPS2-206ENST00000559016 CCDC88BA6NC98 1476 aa14.38□□□□□ -0.11
COPS2-206ENST00000559016 BAZ1BQ9UIG0 1483 aaKnown RBP14.37□□□□□ -0.11
COPS2-206ENST00000559016 HMGXB3Q12766 1538 aa14.36□□□□□ -0.11
COPS2-206ENST00000559016 NCAPD3P42695 1498 aa14.36□□□□□ -0.11
COPS2-206ENST00000559016 CAPN15O75808 1086 aa14.26□□□□□ -0.13
COPS2-206ENST00000559016 U3KPZ7 1027 aaPredicted RBP14.26□□□□□ -0.13
COPS2-206ENST00000559016 TRIM41Q8WV44 630 aa14.21□□□□□ -0.13
COPS2-206ENST00000559016 APLP2Q06481 763 aa14.18□□□□□ -0.14
COPS2-206ENST00000559016 CC2D2AQ9P2K1 1620 aa14.18□□□□□ -0.14
COPS2-206ENST00000559016 DSG3P32926 999 aa14.13□□□□□ -0.15
COPS2-206ENST00000559016 SPINK5Q9NQ38 1064 aaPredicted RBP14.11□□□□□ -0.15
COPS2-206ENST00000559016 PRDM2Q13029 1718 aa14.08□□□□□ -0.16
COPS2-206ENST00000559016 EHMT2Q96KQ7 1210 aa14.08□□□□□ -0.16
COPS2-206ENST00000559016 ABCC8Q09428 1581 aa14.05□□□□□ -0.16
COPS2-206ENST00000559016 CFTRP13569 1480 aa14.05□□□□□ -0.16
COPS2-206ENST00000559016 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.03□□□□□ -0.16
COPS2-206ENST00000559016 HNRNPUL2Q1KMD3 747 aaKnown RBP14.03□□□□□ -0.16
COPS2-206ENST00000559016 WRNQ14191 1432 aaPredicted RBP eCLIP14.03□□□□□ -0.16
COPS2-206ENST00000559016 POTEHQ6S545 545 aa14.01□□□□□ -0.17
COPS2-206ENST00000559016 ZNF219Q9P2Y4 722 aaPredicted RBP13.99□□□□□ -0.17
COPS2-206ENST00000559016 EEA1Q15075 1411 aa13.98□□□□□ -0.17
COPS2-206ENST00000559016 CADPSQ9ULU8 1353 aa13.96□□□□□ -0.17
COPS2-206ENST00000559016 SLC4A1APQ9BWU0 796 aaKnown RBP13.96□□□□□ -0.17
COPS2-206ENST00000559016 BIVM-ERCC5R4GMW8 1640 aa13.96□□□□□ -0.17
COPS2-206ENST00000559016 TOP2BQ02880 1626 aa13.95□□□□□ -0.18
COPS2-206ENST00000559016 TRHP20396 242 aaPredicted RBP13.94□□□□□ -0.18
COPS2-206ENST00000559016 SYNJ1O43426 1573 aa13.93□□□□□ -0.18
COPS2-206ENST00000559016 LAMC3Q9Y6N6 1575 aa13.88□□□□□ -0.19
COPS2-206ENST00000559016 LOC105371045A0A1W2PR82 267 aa13.87□□□□□ -0.19
COPS2-206ENST00000559016 SLC4A2P04920 1241 aa13.87□□□□□ -0.19
COPS2-206ENST00000559016 SAMD1Q6SPF0 538 aaPredicted RBP13.87□□□□□ -0.19
COPS2-206ENST00000559016 FAM9AQ8IZU1 332 aaPredicted RBP13.83□□□□□ -0.2
COPS2-206ENST00000559016 CUX1P39880 1505 aa13.82□□□□□ -0.2
COPS2-206ENST00000559016 SOGA1O94964 1423 aa13.81□□□□□ -0.2
COPS2-206ENST00000559016 ABCB7O75027 752 aa13.81□□□□□ -0.2
COPS2-206ENST00000559016 CSRNP3Q8WYN3 585 aa13.8□□□□□ -0.2
COPS2-206ENST00000559016 FANCD2Q9BXW9 1451 aa13.79□□□□□ -0.2
COPS2-206ENST00000559016 KIF21BO75037 1637 aa13.75□□□□□ -0.21
COPS2-206ENST00000559016 RUSC2Q8N2Y8 1516 aa13.74□□□□□ -0.21
COPS2-206ENST00000559016 PDS5BQ9NTI5 1447 aa13.73□□□□□ -0.21
COPS2-206ENST00000559016 DNMBPQ6XZF7 1577 aa13.73□□□□□ -0.21
COPS2-206ENST00000559016 CEP164Q9UPV0 1460 aa13.73□□□□□ -0.21
COPS2-206ENST00000559016 GOLGA3Q08378 1498 aa13.72□□□□□ -0.21
COPS2-206ENST00000559016 NESP48681 1621 aa13.71□□□□□ -0.22
COPS2-206ENST00000559016 TNIKQ9UKE5 1360 aa13.71□□□□□ -0.22
COPS2-206ENST00000559016 RBM42Q9BTD8 480 aaKnown RBP13.7□□□□□ -0.22
COPS2-206ENST00000559016 KIF27Q86VH2 1401 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms