RNA–Protein interactions for RNA: ENST00000558126.1

LYSMD2-203, Transcript of LysM domain containing 2, humanhuman

TSL 5 BASIC

Gene LYSMD2, Length 775 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2-203ENST00000558126 AEBP2Q6ZN18 517 aaPredicted RBP31.03■■■□□ 2.56
LYSMD2-203ENST00000558126 CHIC1Q5VXU3 224 aa29.41■■■□□ 2.3
LYSMD2-203ENST00000558126 SENP3Q9H4L4 574 aaPredicted RBP26.67■■□□□ 1.86
LYSMD2-203ENST00000558126 NISCHQ9Y2I1 1504 aa26.3■■□□□ 1.8
LYSMD2-203ENST00000558126 PHF23Q9BUL5 403 aaPredicted RBP26.19■■□□□ 1.78
LYSMD2-203ENST00000558126 FOXD1Q16676 465 aa24.75■■□□□ 1.55
LYSMD2-203ENST00000558126 ABCC9O60706 1549 aa23.84■■□□□ 1.41
LYSMD2-203ENST00000558126 CCDC180Q9P1Z9 1646 aa23.64■■□□□ 1.38
LYSMD2-203ENST00000558126 PLPPR3Q6T4P5 718 aa23.62■■□□□ 1.37
LYSMD2-203ENST00000558126 MSH5O43196 834 aa23.37■■□□□ 1.33
LYSMD2-203ENST00000558126 PIAS4Q8N2W9 510 aaPredicted RBP23.15■■□□□ 1.3
LYSMD2-203ENST00000558126 POTEDQ86YR6 584 aa22.95■■□□□ 1.26
LYSMD2-203ENST00000558126 PPP6R1Q9UPN7 881 aa22.94■■□□□ 1.26
LYSMD2-203ENST00000558126 ADRA2BP18089 450 aa22.89■■□□□ 1.25
LYSMD2-203ENST00000558126 DNAJC5BQ9UF47 199 aa22.66■■□□□ 1.22
LYSMD2-203ENST00000558126 RB1CC1Q8TDY2 1594 aa22.65■■□□□ 1.22
LYSMD2-203ENST00000558126 NACADO15069 1562 aa22.49■■□□□ 1.19
LYSMD2-203ENST00000558126 DCAF8L2P0C7V8 631 aa22.23■■□□□ 1.15
LYSMD2-203ENST00000558126 PABPN1Q86U42 306 aaKnown RBP eCLIP22.21■■□□□ 1.15
LYSMD2-203ENST00000558126 MYO15BQ96JP2 1530 aa22.21■■□□□ 1.15
LYSMD2-203ENST00000558126 BICRAQ9NZM4 1560 aa21.98■■□□□ 1.11
LYSMD2-203ENST00000558126 UNC13AQ9UPW8 1703 aa21.96■■□□□ 1.11
LYSMD2-203ENST00000558126 SHROOM4Q9ULL8 1493 aa21.81■■□□□ 1.08
LYSMD2-203ENST00000558126 DCAF1Q9Y4B6 1507 aa21.8■■□□□ 1.08
LYSMD2-203ENST00000558126 ZCCHC6Q5VYS8 1495 aaKnown RBP21.75■■□□□ 1.07
LYSMD2-203ENST00000558126 CECR2Q9BXF3 1484 aa21.57■■□□□ 1.04
LYSMD2-203ENST00000558126 CC2D2AQ9P2K1 1620 aa21.53■■□□□ 1.04
LYSMD2-203ENST00000558126 EIF4G1Q04637 1599 aaKnown RBP21.47■■□□□ 1.03
LYSMD2-203ENST00000558126 SCRIBQ14160 1630 aa21.44■■□□□ 1.02
LYSMD2-203ENST00000558126 SCAF1Q9H7N4 1312 aaKnown RBP21.13■□□□□ 0.97
LYSMD2-203ENST00000558126 DMRT2Q9Y5R5 561 aa21.08■□□□□ 0.97
LYSMD2-203ENST00000558126 DNAJC5Q9H3Z4 198 aa21.06■□□□□ 0.96
LYSMD2-203ENST00000558126 MAPK8IP2Q13387 824 aaPredicted RBP21.03■□□□□ 0.96
LYSMD2-203ENST00000558126 NCAPD3P42695 1498 aa20.82■□□□□ 0.92
LYSMD2-203ENST00000558126 CUX2O14529 1486 aa20.76■□□□□ 0.91
LYSMD2-203ENST00000558126 PPP4R3CPQ6ZMV5 832 aa20.71■□□□□ 0.91
LYSMD2-203ENST00000558126 ATAD2BQ9ULI0 1458 aa20.67■□□□□ 0.9
LYSMD2-203ENST00000558126 ERCC6Q03468 1493 aa20.63■□□□□ 0.89
LYSMD2-203ENST00000558126 SMARCA2P51531 1590 aa20.58■□□□□ 0.88
LYSMD2-203ENST00000558126 HMGXB3Q12766 1538 aa20.58■□□□□ 0.88
LYSMD2-203ENST00000558126 SMARCA4P51532 1647 aa20.5■□□□□ 0.87
LYSMD2-203ENST00000558126 BAZ1AQ9NRL2 1556 aaPredicted RBP20.43■□□□□ 0.86
LYSMD2-203ENST00000558126 BAZ1BQ9UIG0 1483 aaKnown RBP20.41■□□□□ 0.86
LYSMD2-203ENST00000558126 NESP48681 1621 aa20.41■□□□□ 0.86
LYSMD2-203ENST00000558126 PEG3Q9GZU2 1588 aa20.4■□□□□ 0.86
LYSMD2-203ENST00000558126 LAMC3Q9Y6N6 1575 aa20.3■□□□□ 0.84
LYSMD2-203ENST00000558126 CNKSR2Q8WXI2 1034 aa20.29■□□□□ 0.84
LYSMD2-203ENST00000558126 PDS5BQ9NTI5 1447 aa20.26■□□□□ 0.83
LYSMD2-203ENST00000558126 THOC2Q8NI27 1593 aaKnown RBP20.25■□□□□ 0.83
LYSMD2-203ENST00000558126 HOXD11P31277 338 aaPredicted RBP20.24■□□□□ 0.83
LYSMD2-203ENST00000558126 MROH2BQ7Z745 1585 aa20.21■□□□□ 0.83
LYSMD2-203ENST00000558126 DCAF8L1A6NGE4 600 aa20.19■□□□□ 0.82
LYSMD2-203ENST00000558126 CADPSQ9ULU8 1353 aa20.17■□□□□ 0.82
LYSMD2-203ENST00000558126 CACNB1Q02641 598 aaPredicted RBP20.08■□□□□ 0.81
LYSMD2-203ENST00000558126 RNF216Q9NWF9 866 aaPredicted RBP20.07■□□□□ 0.8
LYSMD2-203ENST00000558126 NCBP3Q53F19 620 aaKnown RBP20.05■□□□□ 0.8
LYSMD2-203ENST00000558126 KIF21AQ7Z4S6 1674 aa20.05■□□□□ 0.8
LYSMD2-203ENST00000558126 MRC2Q9UBG0 1479 aa20.04■□□□□ 0.8
LYSMD2-203ENST00000558126 WDR62O43379 1518 aa19.99■□□□□ 0.79
LYSMD2-203ENST00000558126 CEP164Q9UPV0 1460 aa19.89■□□□□ 0.77
LYSMD2-203ENST00000558126 WIZO95785 1651 aa19.88■□□□□ 0.77
LYSMD2-203ENST00000558126 TRIM41Q8WV44 630 aa19.88■□□□□ 0.77
LYSMD2-203ENST00000558126 CFTRP13569 1480 aa19.87■□□□□ 0.77
LYSMD2-203ENST00000558126 RNF39Q9H2S5 420 aa19.86■□□□□ 0.77
LYSMD2-203ENST00000558126 FANCD2Q9BXW9 1451 aa19.86■□□□□ 0.77
LYSMD2-203ENST00000558126 OSCARQ8IYS5 282 aa19.81■□□□□ 0.76
LYSMD2-203ENST00000558126 RSF1Q96T23 1441 aaPredicted RBP19.78■□□□□ 0.76
LYSMD2-203ENST00000558126 NPM3O75607 178 aaKnown RBP19.71■□□□□ 0.75
LYSMD2-203ENST00000558126 TOP2AP11388 1531 aaKnown RBP19.71■□□□□ 0.75
LYSMD2-203ENST00000558126 URB2Q14146 1524 aaKnown RBP19.69■□□□□ 0.74
LYSMD2-203ENST00000558126 C1QBPQ07021 282 aaKnown RBP19.61■□□□□ 0.73
LYSMD2-203ENST00000558126 IFT140Q96RY7 1462 aa19.56■□□□□ 0.72
LYSMD2-203ENST00000558126 KCNA4P22459 653 aa19.56■□□□□ 0.72
LYSMD2-203ENST00000558126 CCDC88BA6NC98 1476 aa19.51■□□□□ 0.71
LYSMD2-203ENST00000558126 ABCC8Q09428 1581 aa19.49■□□□□ 0.71
LYSMD2-203ENST00000558126 ZNF608Q9ULD9 1512 aaPredicted RBP19.47■□□□□ 0.71
LYSMD2-203ENST00000558126 TOPBP1Q92547 1522 aa19.45■□□□□ 0.7
LYSMD2-203ENST00000558126 PRDM2Q13029 1718 aa19.44■□□□□ 0.7
LYSMD2-203ENST00000558126 RIMBP3CA6NJZ7 1639 aa19.4■□□□□ 0.7
LYSMD2-203ENST00000558126 RIMBP3BA6NNM3 1639 aa19.4■□□□□ 0.7
LYSMD2-203ENST00000558126 RIMBP3Q9UFD9 1639 aa19.4■□□□□ 0.7
LYSMD2-203ENST00000558126 ARHGEF11O15085 1522 aa19.38■□□□□ 0.69
LYSMD2-203ENST00000558126 DNMBPQ6XZF7 1577 aa19.34■□□□□ 0.69
LYSMD2-203ENST00000558126 EIF4G3O43432 1585 aaKnown RBP19.3■□□□□ 0.68
LYSMD2-203ENST00000558126 CYB5RLQ6IPT4 315 aa19.29■□□□□ 0.68
LYSMD2-203ENST00000558126 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.29■□□□□ 0.68
LYSMD2-203ENST00000558126 AQRO60306 1485 aaKnown RBP eCLIP19.28■□□□□ 0.68
LYSMD2-203ENST00000558126 TARBP1Q13395 1621 aaKnown RBP19.26■□□□□ 0.67
LYSMD2-203ENST00000558126 POLA1P09884 1462 aaPredicted RBP19.24■□□□□ 0.67
LYSMD2-203ENST00000558126 SOGA1O94964 1423 aa19.18■□□□□ 0.66
LYSMD2-203ENST00000558126 ARAP1Q96P48 1450 aa19.18■□□□□ 0.66
LYSMD2-203ENST00000558126 FBLN2P98095 1184 aa19.18■□□□□ 0.66
LYSMD2-203ENST00000558126 TDRD9Q8NDG6 1382 aaKnown RBP19.15■□□□□ 0.66
LYSMD2-203ENST00000558126 RAD54L2Q9Y4B4 1467 aa19.15■□□□□ 0.66
LYSMD2-203ENST00000558126 WDR97A6NE52 1622 aa19.14■□□□□ 0.65
LYSMD2-203ENST00000558126 CHD1O14646 1710 aa19.13■□□□□ 0.65
LYSMD2-203ENST00000558126 TRHP20396 242 aaPredicted RBP19.11■□□□□ 0.65
LYSMD2-203ENST00000558126 CHMP7Q8WUX9 453 aaPredicted RBP19.08■□□□□ 0.64
LYSMD2-203ENST00000558126 MAGI1Q96QZ7 1491 aaPredicted RBP19.08■□□□□ 0.64
LYSMD2-203ENST00000558126 SNAPC4Q5SXM2 1469 aa19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms