RNA–Protein interactions for RNA: ENST00000557489.5

LRMP-220, Transcript of lymphoid restricted membrane protein, humanhuman

TSL 1 (best)

Gene LRMP, Length 1,253 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRMP-220ENST00000557489 AEBP2Q6ZN18 517 aaPredicted RBP17.34■□□□□ 0.37
LRMP-220ENST00000557489 CHIC1Q5VXU3 224 aa17.06■□□□□ 0.32
LRMP-220ENST00000557489 PHF23Q9BUL5 403 aaPredicted RBP14.99□□□□□ -0.01
LRMP-220ENST00000557489 SENP3Q9H4L4 574 aaPredicted RBP14.73□□□□□ -0.05
LRMP-220ENST00000557489 NISCHQ9Y2I1 1504 aa14.51□□□□□ -0.09
LRMP-220ENST00000557489 ABCC9O60706 1549 aa13.9□□□□□ -0.18
LRMP-220ENST00000557489 PLPPR3Q6T4P5 718 aa13.9□□□□□ -0.18
LRMP-220ENST00000557489 FOXD1Q16676 465 aa13.62□□□□□ -0.23
LRMP-220ENST00000557489 DNAJC5BQ9UF47 199 aa13.49□□□□□ -0.25
LRMP-220ENST00000557489 CCDC180Q9P1Z9 1646 aa13.41□□□□□ -0.26
LRMP-220ENST00000557489 PPP6R1Q9UPN7 881 aa13.18□□□□□ -0.3
LRMP-220ENST00000557489 ADRA2BP18089 450 aa13.15□□□□□ -0.3
LRMP-220ENST00000557489 POTEDQ86YR6 584 aa13.11□□□□□ -0.31
LRMP-220ENST00000557489 RB1CC1Q8TDY2 1594 aa13.05□□□□□ -0.32
LRMP-220ENST00000557489 DNAJC5Q9H3Z4 198 aa12.96□□□□□ -0.33
LRMP-220ENST00000557489 PIAS4Q8N2W9 510 aaPredicted RBP12.87□□□□□ -0.35
LRMP-220ENST00000557489 NACADO15069 1562 aa12.79□□□□□ -0.36
LRMP-220ENST00000557489 PABPN1Q86U42 306 aaKnown RBP eCLIP12.78□□□□□ -0.36
LRMP-220ENST00000557489 UNC13AQ9UPW8 1703 aa12.74□□□□□ -0.37
LRMP-220ENST00000557489 CECR2Q9BXF3 1484 aa12.63□□□□□ -0.39
LRMP-220ENST00000557489 BICRAQ9NZM4 1560 aa12.6□□□□□ -0.39
LRMP-220ENST00000557489 CC2D2AQ9P2K1 1620 aa12.58□□□□□ -0.4
LRMP-220ENST00000557489 MSH5O43196 834 aa12.56□□□□□ -0.4
LRMP-220ENST00000557489 SHROOM4Q9ULL8 1493 aa12.5□□□□□ -0.41
LRMP-220ENST00000557489 DCAF8L2P0C7V8 631 aa12.48□□□□□ -0.41
LRMP-220ENST00000557489 MYO15BQ96JP2 1530 aa12.4□□□□□ -0.42
LRMP-220ENST00000557489 EIF4G1Q04637 1599 aaKnown RBP12.39□□□□□ -0.43
LRMP-220ENST00000557489 CUX2O14529 1486 aa12.34□□□□□ -0.43
LRMP-220ENST00000557489 PPP4R3CPQ6ZMV5 832 aa12.23□□□□□ -0.45
LRMP-220ENST00000557489 TRIM41Q8WV44 630 aa12.13□□□□□ -0.47
LRMP-220ENST00000557489 ERCC6Q03468 1493 aa12.13□□□□□ -0.47
LRMP-220ENST00000557489 SCRIBQ14160 1630 aa12.1□□□□□ -0.47
LRMP-220ENST00000557489 SCAF1Q9H7N4 1312 aaKnown RBP12.08□□□□□ -0.48
LRMP-220ENST00000557489 KCNA4P22459 653 aa12.05□□□□□ -0.48
LRMP-220ENST00000557489 DCAF1Q9Y4B6 1507 aa12□□□□□ -0.49
LRMP-220ENST00000557489 NCBP3Q53F19 620 aaKnown RBP11.96□□□□□ -0.49
LRMP-220ENST00000557489 ZCCHC6Q5VYS8 1495 aaKnown RBP11.9□□□□□ -0.5
LRMP-220ENST00000557489 MAPK8IP2Q13387 824 aaPredicted RBP11.89□□□□□ -0.51
LRMP-220ENST00000557489 CNKSR2Q8WXI2 1034 aa11.89□□□□□ -0.51
LRMP-220ENST00000557489 THOC2Q8NI27 1593 aaKnown RBP11.83□□□□□ -0.52
LRMP-220ENST00000557489 DMRT2Q9Y5R5 561 aa11.78□□□□□ -0.52
LRMP-220ENST00000557489 NPM3O75607 178 aaKnown RBP11.77□□□□□ -0.53
LRMP-220ENST00000557489 NCAPD3P42695 1498 aa11.76□□□□□ -0.53
LRMP-220ENST00000557489 NESP48681 1621 aa11.74□□□□□ -0.53
LRMP-220ENST00000557489 SMARCA2P51531 1590 aa11.7□□□□□ -0.54
LRMP-220ENST00000557489 BAZ1AQ9NRL2 1556 aaPredicted RBP11.67□□□□□ -0.54
LRMP-220ENST00000557489 HMGXB3Q12766 1538 aa11.67□□□□□ -0.54
LRMP-220ENST00000557489 LAMC3Q9Y6N6 1575 aa11.66□□□□□ -0.54
LRMP-220ENST00000557489 RNF216Q9NWF9 866 aaPredicted RBP11.65□□□□□ -0.54
LRMP-220ENST00000557489 KIF21AQ7Z4S6 1674 aa11.65□□□□□ -0.55
LRMP-220ENST00000557489 ATAD2BQ9ULI0 1458 aa11.62□□□□□ -0.55
LRMP-220ENST00000557489 PDS5BQ9NTI5 1447 aa11.6□□□□□ -0.55
LRMP-220ENST00000557489 OSCARQ8IYS5 282 aa11.6□□□□□ -0.55
LRMP-220ENST00000557489 HOXD11P31277 338 aaPredicted RBP11.58□□□□□ -0.56
LRMP-220ENST00000557489 RIMBP3CA6NJZ7 1639 aa11.55□□□□□ -0.56
LRMP-220ENST00000557489 RIMBP3BA6NNM3 1639 aa11.55□□□□□ -0.56
LRMP-220ENST00000557489 RIMBP3Q9UFD9 1639 aa11.55□□□□□ -0.56
LRMP-220ENST00000557489 MRC2Q9UBG0 1479 aa11.52□□□□□ -0.56
LRMP-220ENST00000557489 BAZ1BQ9UIG0 1483 aaKnown RBP11.52□□□□□ -0.56
LRMP-220ENST00000557489 WDR62O43379 1518 aa11.52□□□□□ -0.57
LRMP-220ENST00000557489 SLC4A1APQ9BWU0 796 aaKnown RBP11.5□□□□□ -0.57
LRMP-220ENST00000557489 SMARCA4P51532 1647 aa11.49□□□□□ -0.57
LRMP-220ENST00000557489 TRHP20396 242 aaPredicted RBP11.46□□□□□ -0.57
LRMP-220ENST00000557489 ARHGEF11O15085 1522 aa11.44□□□□□ -0.58
LRMP-220ENST00000557489 PEG3Q9GZU2 1588 aa11.39□□□□□ -0.59
LRMP-220ENST00000557489 CADPSQ9ULU8 1353 aa11.37□□□□□ -0.59
LRMP-220ENST00000557489 CEP164Q9UPV0 1460 aa11.36□□□□□ -0.59
LRMP-220ENST00000557489 CYB5RLQ6IPT4 315 aa11.34□□□□□ -0.59
LRMP-220ENST00000557489 ARAP1Q96P48 1450 aa11.25□□□□□ -0.61
LRMP-220ENST00000557489 FANCD2Q9BXW9 1451 aa11.25□□□□□ -0.61
LRMP-220ENST00000557489 EHMT2Q96KQ7 1210 aa11.25□□□□□ -0.61
LRMP-220ENST00000557489 RSF1Q96T23 1441 aaPredicted RBP11.19□□□□□ -0.62
LRMP-220ENST00000557489 ILDR1Q86SU0 546 aaPredicted RBP11.18□□□□□ -0.62
LRMP-220ENST00000557489 DCAF8L1A6NGE4 600 aa11.17□□□□□ -0.62
LRMP-220ENST00000557489 URB2Q14146 1524 aaKnown RBP11.17□□□□□ -0.62
LRMP-220ENST00000557489 CHD1O14646 1710 aa11.17□□□□□ -0.62
LRMP-220ENST00000557489 IFT140Q96RY7 1462 aa11.15□□□□□ -0.62
LRMP-220ENST00000557489 MROH2BQ7Z745 1585 aa11.14□□□□□ -0.63
LRMP-220ENST00000557489 ZNF608Q9ULD9 1512 aaPredicted RBP11.13□□□□□ -0.63
LRMP-220ENST00000557489 EIF4G3O43432 1585 aaKnown RBP11.11□□□□□ -0.63
LRMP-220ENST00000557489 ZBTB22O15209 634 aa11.11□□□□□ -0.63
LRMP-220ENST00000557489 CSRNP3Q8WYN3 585 aa11.11□□□□□ -0.63
LRMP-220ENST00000557489 CFTRP13569 1480 aa11.11□□□□□ -0.63
LRMP-220ENST00000557489 SLC4A2P04920 1241 aa11.1□□□□□ -0.63
LRMP-220ENST00000557489 FOXD4L1Q9NU39 408 aa11.09□□□□□ -0.63
LRMP-220ENST00000557489 PRDM2Q13029 1718 aa11.07□□□□□ -0.64
LRMP-220ENST00000557489 CACNB1Q02641 598 aaPredicted RBP11.06□□□□□ -0.64
LRMP-220ENST00000557489 FBLN2P98095 1184 aa11.02□□□□□ -0.65
LRMP-220ENST00000557489 WIZO95785 1651 aa11.01□□□□□ -0.65
LRMP-220ENST00000557489 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.98□□□□□ -0.65
LRMP-220ENST00000557489 CLASP1Q7Z460 1538 aa10.98□□□□□ -0.65
LRMP-220ENST00000557489 SYNJ1O43426 1573 aa10.98□□□□□ -0.65
LRMP-220ENST00000557489 TOPBP1Q92547 1522 aa10.97□□□□□ -0.65
LRMP-220ENST00000557489 ABCC8Q09428 1581 aa10.97□□□□□ -0.65
LRMP-220ENST00000557489 AQRO60306 1485 aaKnown RBP eCLIP10.94□□□□□ -0.66
LRMP-220ENST00000557489 TARBP1Q13395 1621 aaKnown RBP10.92□□□□□ -0.66
LRMP-220ENST00000557489 GAPVD1Q14C86 1478 aa10.91□□□□□ -0.66
LRMP-220ENST00000557489 DNMBPQ6XZF7 1577 aa10.9□□□□□ -0.66
LRMP-220ENST00000557489 SUPT5HO00267 1087 aaKnown RBP10.89□□□□□ -0.67
LRMP-220ENST00000557489 MYCNP04198 464 aaPredicted RBP10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms