RNA–Protein interactions for RNA: ENST00000557357.5

PSMC1-207, Transcript of proteasome 26S subunit, ATPase 1, humanhuman

TSL 4

Gene PSMC1, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC1-207ENST00000557357 AEBP2Q6ZN18 517 aaPredicted RBP23.59■■□□□ 1.37
PSMC1-207ENST00000557357 CHIC1Q5VXU3 224 aa22.12■■□□□ 1.13
PSMC1-207ENST00000557357 SENP3Q9H4L4 574 aaPredicted RBP20.25■□□□□ 0.83
PSMC1-207ENST00000557357 PHF23Q9BUL5 403 aaPredicted RBP19.91■□□□□ 0.78
PSMC1-207ENST00000557357 FOXD1Q16676 465 aa18.88■□□□□ 0.61
PSMC1-207ENST00000557357 NISCHQ9Y2I1 1504 aa18.54■□□□□ 0.56
PSMC1-207ENST00000557357 POTEDQ86YR6 584 aa18.01■□□□□ 0.47
PSMC1-207ENST00000557357 MSH5O43196 834 aa17.87■□□□□ 0.45
PSMC1-207ENST00000557357 PLPPR3Q6T4P5 718 aa17.54■□□□□ 0.4
PSMC1-207ENST00000557357 PIAS4Q8N2W9 510 aaPredicted RBP17.53■□□□□ 0.4
PSMC1-207ENST00000557357 PPP6R1Q9UPN7 881 aa17.34■□□□□ 0.37
PSMC1-207ENST00000557357 ADRA2BP18089 450 aa17.25■□□□□ 0.35
PSMC1-207ENST00000557357 ABCC9O60706 1549 aa16.96■□□□□ 0.3
PSMC1-207ENST00000557357 CCDC180Q9P1Z9 1646 aa16.77■□□□□ 0.27
PSMC1-207ENST00000557357 DNAJC5BQ9UF47 199 aa16.13■□□□□ 0.17
PSMC1-207ENST00000557357 RB1CC1Q8TDY2 1594 aa16.05■□□□□ 0.16
PSMC1-207ENST00000557357 DMRT2Q9Y5R5 561 aa16■□□□□ 0.15
PSMC1-207ENST00000557357 MAPK8IP2Q13387 824 aaPredicted RBP15.95■□□□□ 0.14
PSMC1-207ENST00000557357 NACADO15069 1562 aa15.9■□□□□ 0.14
PSMC1-207ENST00000557357 SCAF1Q9H7N4 1312 aaKnown RBP15.9■□□□□ 0.14
PSMC1-207ENST00000557357 UNC13AQ9UPW8 1703 aa15.74■□□□□ 0.11
PSMC1-207ENST00000557357 PABPN1Q86U42 306 aaKnown RBP eCLIP15.73■□□□□ 0.11
PSMC1-207ENST00000557357 DCAF8L2P0C7V8 631 aa15.68■□□□□ 0.1
PSMC1-207ENST00000557357 MYO15BQ96JP2 1530 aa15.62■□□□□ 0.09
PSMC1-207ENST00000557357 BICRAQ9NZM4 1560 aa15.62■□□□□ 0.09
PSMC1-207ENST00000557357 CACNB1Q02641 598 aaPredicted RBP15.51■□□□□ 0.07
PSMC1-207ENST00000557357 PPP4R3CPQ6ZMV5 832 aa15.42■□□□□ 0.06
PSMC1-207ENST00000557357 SHROOM4Q9ULL8 1493 aa15.38■□□□□ 0.05
PSMC1-207ENST00000557357 CC2D2AQ9P2K1 1620 aa15.33■□□□□ 0.04
PSMC1-207ENST00000557357 DCAF1Q9Y4B6 1507 aa15.33■□□□□ 0.04
PSMC1-207ENST00000557357 ZCCHC6Q5VYS8 1495 aaKnown RBP15.32■□□□□ 0.04
PSMC1-207ENST00000557357 CECR2Q9BXF3 1484 aa15.3■□□□□ 0.04
PSMC1-207ENST00000557357 HOXD11P31277 338 aaPredicted RBP15.29■□□□□ 0.04
PSMC1-207ENST00000557357 DCAF8L1A6NGE4 600 aa15.27■□□□□ 0.04
PSMC1-207ENST00000557357 EIF4G1Q04637 1599 aaKnown RBP15.24■□□□□ 0.03
PSMC1-207ENST00000557357 SCRIBQ14160 1630 aa15.22■□□□□ 0.03
PSMC1-207ENST00000557357 RNF39Q9H2S5 420 aa15.19■□□□□ 0.02
PSMC1-207ENST00000557357 CNKSR2Q8WXI2 1034 aa15.1■□□□□ 0.01
PSMC1-207ENST00000557357 RNF216Q9NWF9 866 aaPredicted RBP15.07■□□□□ 0
PSMC1-207ENST00000557357 NCBP3Q53F19 620 aaKnown RBP15□□□□□ -0.01
PSMC1-207ENST00000557357 C1QBPQ07021 282 aaKnown RBP14.98□□□□□ -0.01
PSMC1-207ENST00000557357 DNAJC5Q9H3Z4 198 aa14.98□□□□□ -0.01
PSMC1-207ENST00000557357 KCNA4P22459 653 aa14.8□□□□□ -0.04
PSMC1-207ENST00000557357 CUX2O14529 1486 aa14.73□□□□□ -0.05
PSMC1-207ENST00000557357 NPM3O75607 178 aaKnown RBP14.72□□□□□ -0.05
PSMC1-207ENST00000557357 NCAPD3P42695 1498 aa14.68□□□□□ -0.06
PSMC1-207ENST00000557357 ERCC6Q03468 1493 aa14.64□□□□□ -0.07
PSMC1-207ENST00000557357 ATAD2BQ9ULI0 1458 aa14.58□□□□□ -0.08
PSMC1-207ENST00000557357 HMGXB3Q12766 1538 aa14.55□□□□□ -0.08
PSMC1-207ENST00000557357 SMARCA2P51531 1590 aa14.54□□□□□ -0.08
PSMC1-207ENST00000557357 SMARCA4P51532 1647 aa14.52□□□□□ -0.08
PSMC1-207ENST00000557357 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.51□□□□□ -0.09
PSMC1-207ENST00000557357 NESP48681 1621 aa14.51□□□□□ -0.09
PSMC1-207ENST00000557357 THOC2Q8NI27 1593 aaKnown RBP14.43□□□□□ -0.1
PSMC1-207ENST00000557357 BAZ1BQ9UIG0 1483 aaKnown RBP14.42□□□□□ -0.1
PSMC1-207ENST00000557357 PEG3Q9GZU2 1588 aa14.4□□□□□ -0.1
PSMC1-207ENST00000557357 BAZ1AQ9NRL2 1556 aaPredicted RBP14.4□□□□□ -0.1
PSMC1-207ENST00000557357 LAMC3Q9Y6N6 1575 aa14.38□□□□□ -0.11
PSMC1-207ENST00000557357 KIF21AQ7Z4S6 1674 aa14.33□□□□□ -0.11
PSMC1-207ENST00000557357 MROH2BQ7Z745 1585 aa14.28□□□□□ -0.12
PSMC1-207ENST00000557357 PDS5BQ9NTI5 1447 aa14.28□□□□□ -0.12
PSMC1-207ENST00000557357 CADPSQ9ULU8 1353 aa14.2□□□□□ -0.14
PSMC1-207ENST00000557357 MRC2Q9UBG0 1479 aa14.18□□□□□ -0.14
PSMC1-207ENST00000557357 TRIM41Q8WV44 630 aa14.18□□□□□ -0.14
PSMC1-207ENST00000557357 WDR62O43379 1518 aa14.18□□□□□ -0.14
PSMC1-207ENST00000557357 U3KPZ7 1027 aaPredicted RBP14.16□□□□□ -0.14
PSMC1-207ENST00000557357 WIZO95785 1651 aa14.1□□□□□ -0.15
PSMC1-207ENST00000557357 SLC4A1APQ9BWU0 796 aaKnown RBP14.09□□□□□ -0.15
PSMC1-207ENST00000557357 DSG3P32926 999 aa14.08□□□□□ -0.16
PSMC1-207ENST00000557357 CEP164Q9UPV0 1460 aa14.07□□□□□ -0.16
PSMC1-207ENST00000557357 CAPN15O75808 1086 aa14.04□□□□□ -0.16
PSMC1-207ENST00000557357 POTEHQ6S545 545 aa14.04□□□□□ -0.16
PSMC1-207ENST00000557357 FANCD2Q9BXW9 1451 aa14.04□□□□□ -0.16
PSMC1-207ENST00000557357 SPINK5Q9NQ38 1064 aaPredicted RBP14.03□□□□□ -0.16
PSMC1-207ENST00000557357 CFTRP13569 1480 aa14□□□□□ -0.17
PSMC1-207ENST00000557357 OSCARQ8IYS5 282 aa13.99□□□□□ -0.17
PSMC1-207ENST00000557357 URB2Q14146 1524 aaKnown RBP13.95□□□□□ -0.18
PSMC1-207ENST00000557357 SLC4A2P04920 1241 aa13.93□□□□□ -0.18
PSMC1-207ENST00000557357 TOP2AP11388 1531 aaKnown RBP13.9□□□□□ -0.18
PSMC1-207ENST00000557357 RSF1Q96T23 1441 aaPredicted RBP13.9□□□□□ -0.19
PSMC1-207ENST00000557357 PRDM2Q13029 1718 aa13.88□□□□□ -0.19
PSMC1-207ENST00000557357 RIMBP3CA6NJZ7 1639 aa13.86□□□□□ -0.19
PSMC1-207ENST00000557357 RIMBP3BA6NNM3 1639 aa13.86□□□□□ -0.19
PSMC1-207ENST00000557357 RIMBP3Q9UFD9 1639 aa13.86□□□□□ -0.19
PSMC1-207ENST00000557357 APLP2Q06481 763 aa13.82□□□□□ -0.2
PSMC1-207ENST00000557357 ZNF608Q9ULD9 1512 aaPredicted RBP13.81□□□□□ -0.2
PSMC1-207ENST00000557357 IFT140Q96RY7 1462 aa13.8□□□□□ -0.2
PSMC1-207ENST00000557357 ARHGEF11O15085 1522 aa13.79□□□□□ -0.2
PSMC1-207ENST00000557357 TOPBP1Q92547 1522 aa13.76□□□□□ -0.21
PSMC1-207ENST00000557357 ZNF219Q9P2Y4 722 aaPredicted RBP13.75□□□□□ -0.21
PSMC1-207ENST00000557357 CCDC88BA6NC98 1476 aa13.74□□□□□ -0.21
PSMC1-207ENST00000557357 EIF4G3O43432 1585 aaKnown RBP13.73□□□□□ -0.21
PSMC1-207ENST00000557357 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.71□□□□□ -0.21
PSMC1-207ENST00000557357 TRHP20396 242 aaPredicted RBP13.71□□□□□ -0.21
PSMC1-207ENST00000557357 HNRNPUL2Q1KMD3 747 aaKnown RBP13.71□□□□□ -0.21
PSMC1-207ENST00000557357 ABCC8Q09428 1581 aa13.71□□□□□ -0.22
PSMC1-207ENST00000557357 FOXD4L1Q9NU39 408 aa13.7□□□□□ -0.22
PSMC1-207ENST00000557357 DNMBPQ6XZF7 1577 aa13.69□□□□□ -0.22
PSMC1-207ENST00000557357 CHD1O14646 1710 aa13.69□□□□□ -0.22
PSMC1-207ENST00000557357 CYB5RLQ6IPT4 315 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms