RNA–Protein interactions for RNA: ENST00000556683.1

TMX1-203, Transcript of thioredoxin related transmembrane protein 1, humanhuman

TSL 2

Gene TMX1, Length 2,117 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMX1-203ENST00000556683 NISCHQ9Y2I1 1504 aa29.3■■■□□ 2.28
TMX1-203ENST00000556683 CCDC180Q9P1Z9 1646 aa25.84■■□□□ 1.73
TMX1-203ENST00000556683 SHROOM4Q9ULL8 1493 aa25.33■■□□□ 1.65
TMX1-203ENST00000556683 ABCC9O60706 1549 aa25.17■■□□□ 1.62
TMX1-203ENST00000556683 SUPT5HO00267 1087 aaKnown RBP25■■□□□ 1.59
TMX1-203ENST00000556683 ZCCHC6Q5VYS8 1495 aaKnown RBP24.87■■□□□ 1.57
TMX1-203ENST00000556683 MYO15BQ96JP2 1530 aa24.63■■□□□ 1.53
TMX1-203ENST00000556683 CHIC1Q5VXU3 224 aa24.5■■□□□ 1.51
TMX1-203ENST00000556683 HRCP23327 699 aa24.46■■□□□ 1.51
TMX1-203ENST00000556683 DCAF8L2P0C7V8 631 aa24.41■■□□□ 1.5
TMX1-203ENST00000556683 NACADO15069 1562 aa24.21■■□□□ 1.47
TMX1-203ENST00000556683 RB1CC1Q8TDY2 1594 aa24.2■■□□□ 1.47
TMX1-203ENST00000556683 PCGF6Q9BYE7 350 aa24.18■■□□□ 1.46
TMX1-203ENST00000556683 DCAF1Q9Y4B6 1507 aa24.11■■□□□ 1.45
TMX1-203ENST00000556683 PPARGC1BQ86YN6 1023 aaKnown RBP23.96■■□□□ 1.43
TMX1-203ENST00000556683 LOC105371045A0A1W2PR82 267 aa23.83■■□□□ 1.41
TMX1-203ENST00000556683 UNC13AQ9UPW8 1703 aa23.81■■□□□ 1.4
TMX1-203ENST00000556683 SCRIBQ14160 1630 aa23.73■■□□□ 1.39
TMX1-203ENST00000556683 TRIM26Q12899 539 aaPredicted RBP23.58■■□□□ 1.37
TMX1-203ENST00000556683 PABPN1Q86U42 306 aaKnown RBP eCLIP23.57■■□□□ 1.36
TMX1-203ENST00000556683 BICRAQ9NZM4 1560 aa23.55■■□□□ 1.36
TMX1-203ENST00000556683 RSF1Q96T23 1441 aaPredicted RBP23.35■■□□□ 1.33
TMX1-203ENST00000556683 TRIM41Q8WV44 630 aa23.21■■□□□ 1.31
TMX1-203ENST00000556683 ZEB1P37275 1124 aaPredicted RBP23.2■■□□□ 1.3
TMX1-203ENST00000556683 FAM9AQ8IZU1 332 aaPredicted RBP23.09■■□□□ 1.29
TMX1-203ENST00000556683 EHMT2Q96KQ7 1210 aa22.93■■□□□ 1.26
TMX1-203ENST00000556683 DNAJC5BQ9UF47 199 aa22.91■■□□□ 1.26
TMX1-203ENST00000556683 EIF4G1Q04637 1599 aaKnown RBP22.88■■□□□ 1.25
TMX1-203ENST00000556683 CECR2Q9BXF3 1484 aa22.87■■□□□ 1.25
TMX1-203ENST00000556683 SCAF1Q9H7N4 1312 aaKnown RBP22.85■■□□□ 1.25
TMX1-203ENST00000556683 MROH2BQ7Z745 1585 aa22.84■■□□□ 1.25
TMX1-203ENST00000556683 WIZO95785 1651 aa22.79■■□□□ 1.24
TMX1-203ENST00000556683 CC2D2AQ9P2K1 1620 aa22.75■■□□□ 1.23
TMX1-203ENST00000556683 PELP1Q8IZL8 1130 aaKnown RBP22.75■■□□□ 1.23
TMX1-203ENST00000556683 SMARCA4P51532 1647 aa22.66■■□□□ 1.22
TMX1-203ENST00000556683 BAZ1AQ9NRL2 1556 aaPredicted RBP22.63■■□□□ 1.21
TMX1-203ENST00000556683 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.61■■□□□ 1.21
TMX1-203ENST00000556683 CCER1Q8TC90 406 aaPredicted RBP22.53■■□□□ 1.2
TMX1-203ENST00000556683 ACIN1Q9UKV3 1341 aaKnown RBP22.45■■□□□ 1.18
TMX1-203ENST00000556683 ATAD2BQ9ULI0 1458 aa22.45■■□□□ 1.18
TMX1-203ENST00000556683 ABCC8Q09428 1581 aa22.42■■□□□ 1.18
TMX1-203ENST00000556683 NEUROD1Q13562 356 aa22.4■■□□□ 1.18
TMX1-203ENST00000556683 WRNQ14191 1432 aaPredicted RBP eCLIP22.39■■□□□ 1.18
TMX1-203ENST00000556683 SMARCA2P51531 1590 aa22.39■■□□□ 1.17
TMX1-203ENST00000556683 CCDC88BA6NC98 1476 aa22.37■■□□□ 1.17
TMX1-203ENST00000556683 PEG3Q9GZU2 1588 aa22.37■■□□□ 1.17
TMX1-203ENST00000556683 TOP2AP11388 1531 aaKnown RBP22.35■■□□□ 1.17
TMX1-203ENST00000556683 NCAPD3P42695 1498 aa22.34■■□□□ 1.17
TMX1-203ENST00000556683 DIEXFQ68CQ4 756 aaKnown RBP22.33■■□□□ 1.17
TMX1-203ENST00000556683 CEP162Q5TB80 1403 aa22.32■■□□□ 1.16
TMX1-203ENST00000556683 TTBK1Q5TCY1 1321 aaPredicted RBP22.3■■□□□ 1.16
TMX1-203ENST00000556683 BAZ1BQ9UIG0 1483 aaKnown RBP22.28■■□□□ 1.16
TMX1-203ENST00000556683 HMGXB3Q12766 1538 aa22.27■■□□□ 1.16
TMX1-203ENST00000556683 SOGA1O94964 1423 aa22.25■■□□□ 1.15
TMX1-203ENST00000556683 TNIKQ9UKE5 1360 aa22.22■■□□□ 1.15
TMX1-203ENST00000556683 GTF3C3Q9Y5Q9 886 aa22.21■■□□□ 1.15
TMX1-203ENST00000556683 CENPBP07199 599 aaPredicted RBP22.19■■□□□ 1.14
TMX1-203ENST00000556683 RUSC2Q8N2Y8 1516 aa22.15■■□□□ 1.14
TMX1-203ENST00000556683 EEA1Q15075 1411 aa22.11■■□□□ 1.13
TMX1-203ENST00000556683 CSRNP3Q8WYN3 585 aa22.09■■□□□ 1.13
TMX1-203ENST00000556683 ZNF316A6NFI3 1004 aaPredicted RBP22.05■■□□□ 1.12
TMX1-203ENST00000556683 UBTFP17480 764 aaKnown RBP22.04■■□□□ 1.12
TMX1-203ENST00000556683 GOLGA3Q08378 1498 aa22.04■■□□□ 1.12
TMX1-203ENST00000556683 NESP48681 1621 aa21.89■■□□□ 1.09
TMX1-203ENST00000556683 KIF21BO75037 1637 aa21.88■■□□□ 1.09
TMX1-203ENST00000556683 YTHDC1Q96MU7 727 aaKnown RBP21.86■■□□□ 1.09
TMX1-203ENST00000556683 SYNJ1O43426 1573 aa21.86■■□□□ 1.09
TMX1-203ENST00000556683 CEP164Q9UPV0 1460 aa21.86■■□□□ 1.09
TMX1-203ENST00000556683 HNRNPUL2Q1KMD3 747 aaKnown RBP21.85■■□□□ 1.09
TMX1-203ENST00000556683 MIER1Q8N108 512 aa21.82■■□□□ 1.08
TMX1-203ENST00000556683 CLIP1P30622 1438 aa21.8■■□□□ 1.08
TMX1-203ENST00000556683 VPS8Q8N3P4 1428 aa21.76■■□□□ 1.07
TMX1-203ENST00000556683 LAMC3Q9Y6N6 1575 aa21.73■■□□□ 1.07
TMX1-203ENST00000556683 CADPSQ9ULU8 1353 aa21.73■■□□□ 1.07
TMX1-203ENST00000556683 RAPGEF2Q9Y4G8 1499 aa21.68■■□□□ 1.06
TMX1-203ENST00000556683 MYT1Q01538 1121 aa21.67■■□□□ 1.06
TMX1-203ENST00000556683 CFTRP13569 1480 aa21.66■■□□□ 1.06
TMX1-203ENST00000556683 KIF21AQ7Z4S6 1674 aa21.63■■□□□ 1.05
TMX1-203ENST00000556683 ERCC6Q03468 1493 aa21.61■■□□□ 1.05
TMX1-203ENST00000556683 APLP2Q06481 763 aa21.6■■□□□ 1.05
TMX1-203ENST00000556683 PRDM2Q13029 1718 aa21.56■■□□□ 1.04
TMX1-203ENST00000556683 RANGAP1P46060 587 aaPredicted RBP21.56■■□□□ 1.04
TMX1-203ENST00000556683 PDS5BQ9NTI5 1447 aa21.54■■□□□ 1.04
TMX1-203ENST00000556683 TOP2BQ02880 1626 aa21.52■■□□□ 1.04
TMX1-203ENST00000556683 FANCD2Q9BXW9 1451 aa21.52■■□□□ 1.04
TMX1-203ENST00000556683 DHX57Q6P158 1386 aaKnown RBP21.5■■□□□ 1.03
TMX1-203ENST00000556683 CLSPNQ9HAW4 1339 aa21.46■■□□□ 1.03
TMX1-203ENST00000556683 BIVM-ERCC5R4GMW8 1640 aa21.45■■□□□ 1.02
TMX1-203ENST00000556683 ARAP1Q96P48 1450 aa21.45■■□□□ 1.02
TMX1-203ENST00000556683 THOC2Q8NI27 1593 aaKnown RBP21.44■■□□□ 1.02
TMX1-203ENST00000556683 ERICH3Q5RHP9 1530 aa21.43■■□□□ 1.02
TMX1-203ENST00000556683 PRXQ9BXM0 1461 aa21.39■■□□□ 1.02
TMX1-203ENST00000556683 KANK4Q5T7N3 995 aaPredicted RBP21.38■■□□□ 1.01
TMX1-203ENST00000556683 MRC2Q9UBG0 1479 aa21.36■■□□□ 1.01
TMX1-203ENST00000556683 RRBP1Q9P2E9 1410 aaKnown RBP21.33■■□□□ 1
TMX1-203ENST00000556683 URB2Q14146 1524 aaKnown RBP21.32■■□□□ 1
TMX1-203ENST00000556683 SUPT16HQ9Y5B9 1047 aaKnown RBP21.3■■□□□ 1
TMX1-203ENST00000556683 WDR62O43379 1518 aa21.29■■□□□ 1
TMX1-203ENST00000556683 CUX2O14529 1486 aa21.27■■□□□ 1
TMX1-203ENST00000556683 CUX1P39880 1505 aa21.23■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms