RNA–Protein interactions for RNA: ENST00000556496.2

NRXN3-213, Transcript of neurexin 3, humanhuman

TSL 1 (best)

Gene NRXN3, Length 2,737 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NRXN3-213ENST00000556496 NISCHQ9Y2I1 1504 aa22.46■■□□□ 1.19
NRXN3-213ENST00000556496 CCDC180Q9P1Z9 1646 aa19.19■□□□□ 0.66
NRXN3-213ENST00000556496 ZCCHC6Q5VYS8 1495 aaKnown RBP18.96■□□□□ 0.63
NRXN3-213ENST00000556496 SHROOM4Q9ULL8 1493 aa18.96■□□□□ 0.63
NRXN3-213ENST00000556496 DCAF8L2P0C7V8 631 aa18.68■□□□□ 0.58
NRXN3-213ENST00000556496 SUPT5HO00267 1087 aaKnown RBP18.51■□□□□ 0.55
NRXN3-213ENST00000556496 DCAF1Q9Y4B6 1507 aa18.46■□□□□ 0.55
NRXN3-213ENST00000556496 MYO15BQ96JP2 1530 aa18.02■□□□□ 0.47
NRXN3-213ENST00000556496 ABCC9O60706 1549 aa17.94■□□□□ 0.46
NRXN3-213ENST00000556496 SCRIBQ14160 1630 aa17.92■□□□□ 0.46
NRXN3-213ENST00000556496 CHIC1Q5VXU3 224 aa17.92■□□□□ 0.46
NRXN3-213ENST00000556496 NACADO15069 1562 aa17.81■□□□□ 0.44
NRXN3-213ENST00000556496 RSF1Q96T23 1441 aaPredicted RBP17.7■□□□□ 0.42
NRXN3-213ENST00000556496 RB1CC1Q8TDY2 1594 aa17.55■□□□□ 0.4
NRXN3-213ENST00000556496 CECR2Q9BXF3 1484 aa17.51■□□□□ 0.39
NRXN3-213ENST00000556496 MROH2BQ7Z745 1585 aa17.43■□□□□ 0.38
NRXN3-213ENST00000556496 LOC105371045A0A1W2PR82 267 aa17.35■□□□□ 0.37
NRXN3-213ENST00000556496 WIZO95785 1651 aa17.3■□□□□ 0.36
NRXN3-213ENST00000556496 TRIM41Q8WV44 630 aa17.29■□□□□ 0.36
NRXN3-213ENST00000556496 BAZ1AQ9NRL2 1556 aaPredicted RBP17.28■□□□□ 0.36
NRXN3-213ENST00000556496 UNC13AQ9UPW8 1703 aa17.21■□□□□ 0.35
NRXN3-213ENST00000556496 SMARCA4P51532 1647 aa17.13■□□□□ 0.33
NRXN3-213ENST00000556496 PCGF6Q9BYE7 350 aa17.13■□□□□ 0.33
NRXN3-213ENST00000556496 PABPN1Q86U42 306 aaKnown RBP eCLIP17.12■□□□□ 0.33
NRXN3-213ENST00000556496 FAM9AQ8IZU1 332 aaPredicted RBP17.11■□□□□ 0.33
NRXN3-213ENST00000556496 TOP2AP11388 1531 aaKnown RBP17.07■□□□□ 0.32
NRXN3-213ENST00000556496 BICRAQ9NZM4 1560 aa17.06■□□□□ 0.32
NRXN3-213ENST00000556496 CCDC88BA6NC98 1476 aa16.99■□□□□ 0.31
NRXN3-213ENST00000556496 HRCP23327 699 aa16.99■□□□□ 0.31
NRXN3-213ENST00000556496 EIF4G1Q04637 1599 aaKnown RBP16.98■□□□□ 0.31
NRXN3-213ENST00000556496 SMARCA2P51531 1590 aa16.95■□□□□ 0.3
NRXN3-213ENST00000556496 EHMT2Q96KQ7 1210 aa16.94■□□□□ 0.3
NRXN3-213ENST00000556496 TRIM26Q12899 539 aaPredicted RBP16.88■□□□□ 0.29
NRXN3-213ENST00000556496 ABCC8Q09428 1581 aa16.85■□□□□ 0.29
NRXN3-213ENST00000556496 PEG3Q9GZU2 1588 aa16.84■□□□□ 0.29
NRXN3-213ENST00000556496 ATAD2BQ9ULI0 1458 aa16.77■□□□□ 0.27
NRXN3-213ENST00000556496 BAZ1BQ9UIG0 1483 aaKnown RBP16.72■□□□□ 0.27
NRXN3-213ENST00000556496 SOGA1O94964 1423 aa16.67■□□□□ 0.26
NRXN3-213ENST00000556496 WRNQ14191 1432 aaPredicted RBP eCLIP16.64■□□□□ 0.25
NRXN3-213ENST00000556496 PPARGC1BQ86YN6 1023 aaKnown RBP16.63■□□□□ 0.25
NRXN3-213ENST00000556496 EEA1Q15075 1411 aa16.6■□□□□ 0.25
NRXN3-213ENST00000556496 CSRNP3Q8WYN3 585 aa16.6■□□□□ 0.25
NRXN3-213ENST00000556496 RUSC2Q8N2Y8 1516 aa16.58■□□□□ 0.25
NRXN3-213ENST00000556496 SYNJ1O43426 1573 aa16.53■□□□□ 0.24
NRXN3-213ENST00000556496 TNIKQ9UKE5 1360 aa16.52■□□□□ 0.23
NRXN3-213ENST00000556496 CEP162Q5TB80 1403 aa16.51■□□□□ 0.23
NRXN3-213ENST00000556496 UBTFP17480 764 aaKnown RBP16.5■□□□□ 0.23
NRXN3-213ENST00000556496 NCAPD3P42695 1498 aa16.5■□□□□ 0.23
NRXN3-213ENST00000556496 HMGXB3Q12766 1538 aa16.46■□□□□ 0.23
NRXN3-213ENST00000556496 GOLGA3Q08378 1498 aa16.45■□□□□ 0.22
NRXN3-213ENST00000556496 ZEB1P37275 1124 aaPredicted RBP16.43■□□□□ 0.22
NRXN3-213ENST00000556496 CEP164Q9UPV0 1460 aa16.39■□□□□ 0.21
NRXN3-213ENST00000556496 TOP2BQ02880 1626 aa16.36■□□□□ 0.21
NRXN3-213ENST00000556496 TTBK1Q5TCY1 1321 aaPredicted RBP16.34■□□□□ 0.21
NRXN3-213ENST00000556496 KIF21BO75037 1637 aa16.34■□□□□ 0.21
NRXN3-213ENST00000556496 CFTRP13569 1480 aa16.3■□□□□ 0.2
NRXN3-213ENST00000556496 BIVM-ERCC5R4GMW8 1640 aa16.29■□□□□ 0.2
NRXN3-213ENST00000556496 RAPGEF2Q9Y4G8 1499 aa16.28■□□□□ 0.2
NRXN3-213ENST00000556496 CLIP1P30622 1438 aa16.26■□□□□ 0.19
NRXN3-213ENST00000556496 CUX1P39880 1505 aa16.25■□□□□ 0.19
NRXN3-213ENST00000556496 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.23■□□□□ 0.19
NRXN3-213ENST00000556496 RANGAP1P46060 587 aaPredicted RBP16.19■□□□□ 0.18
NRXN3-213ENST00000556496 CCER1Q8TC90 406 aaPredicted RBP16.19■□□□□ 0.18
NRXN3-213ENST00000556496 PRXQ9BXM0 1461 aa16.17■□□□□ 0.18
NRXN3-213ENST00000556496 CADPSQ9ULU8 1353 aa16.17■□□□□ 0.18
NRXN3-213ENST00000556496 KIF27Q86VH2 1401 aa16.16■□□□□ 0.18
NRXN3-213ENST00000556496 VPS8Q8N3P4 1428 aa16.16■□□□□ 0.18
NRXN3-213ENST00000556496 CC2D2AQ9P2K1 1620 aa16.15■□□□□ 0.18
NRXN3-213ENST00000556496 ERICH3Q5RHP9 1530 aa16.13■□□□□ 0.17
NRXN3-213ENST00000556496 APLP2Q06481 763 aa16.1■□□□□ 0.17
NRXN3-213ENST00000556496 PRDM2Q13029 1718 aa16.08■□□□□ 0.16
NRXN3-213ENST00000556496 CUX2O14529 1486 aa16.03■□□□□ 0.16
NRXN3-213ENST00000556496 FGD5Q6ZNL6 1462 aa16■□□□□ 0.15
NRXN3-213ENST00000556496 ARAP1Q96P48 1450 aa16■□□□□ 0.15
NRXN3-213ENST00000556496 IGF1RP08069 1367 aa15.99■□□□□ 0.15
NRXN3-213ENST00000556496 FANCD2Q9BXW9 1451 aa15.99■□□□□ 0.15
NRXN3-213ENST00000556496 HNRNPUL2Q1KMD3 747 aaKnown RBP15.99■□□□□ 0.15
NRXN3-213ENST00000556496 CARMIL1Q5VZK9 1371 aa15.93■□□□□ 0.14
NRXN3-213ENST00000556496 NESP48681 1621 aa15.92■□□□□ 0.14
NRXN3-213ENST00000556496 ARHGAP35Q9NRY4 1499 aa15.91■□□□□ 0.14
NRXN3-213ENST00000556496 KANK4Q5T7N3 995 aaPredicted RBP15.89■□□□□ 0.13
NRXN3-213ENST00000556496 DNMBPQ6XZF7 1577 aa15.87■□□□□ 0.13
NRXN3-213ENST00000556496 TOPBP1Q92547 1522 aa15.86■□□□□ 0.13
NRXN3-213ENST00000556496 RAD54L2Q9Y4B4 1467 aa15.86■□□□□ 0.13
NRXN3-213ENST00000556496 POLA1P09884 1462 aaPredicted RBP15.84■□□□□ 0.13
NRXN3-213ENST00000556496 ABCA10Q8WWZ4 1543 aa15.82■□□□□ 0.12
NRXN3-213ENST00000556496 LAMC3Q9Y6N6 1575 aa15.8■□□□□ 0.12
NRXN3-213ENST00000556496 DNAJC5BQ9UF47 199 aa15.8■□□□□ 0.12
NRXN3-213ENST00000556496 URB2Q14146 1524 aaKnown RBP15.76■□□□□ 0.11
NRXN3-213ENST00000556496 RRBP1Q9P2E9 1410 aaKnown RBP15.75■□□□□ 0.11
NRXN3-213ENST00000556496 DIEXFQ68CQ4 756 aaKnown RBP15.74■□□□□ 0.11
NRXN3-213ENST00000556496 PDS5BQ9NTI5 1447 aa15.74■□□□□ 0.11
NRXN3-213ENST00000556496 P3H3Q8IVL6 736 aa15.73■□□□□ 0.11
NRXN3-213ENST00000556496 CCNB3Q8WWL7 1395 aa15.71■□□□□ 0.11
NRXN3-213ENST00000556496 FHAD1B1AJZ9 1412 aa15.7■□□□□ 0.1
NRXN3-213ENST00000556496 TDRD9Q8NDG6 1382 aaKnown RBP15.69■□□□□ 0.1
NRXN3-213ENST00000556496 ZNF316A6NFI3 1004 aaPredicted RBP15.69■□□□□ 0.1
NRXN3-213ENST00000556496 MAP3K1Q13233 1512 aa15.69■□□□□ 0.1
NRXN3-213ENST00000556496 TIAM1Q13009 1591 aa15.68■□□□□ 0.1
NRXN3-213ENST00000556496 CUL7Q14999 1698 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 297.1 ms