RNA–Protein interactions for RNA: ENST00000555801.1

LINC00640-202, long intergenic non-protein coding RNA 640, humanhuman

TSL 3

Gene LINC00640, Length 392 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00640-202ENST00000555801 AEBP2Q6ZN18 517 aaPredicted RBP14.18□□□□□ -0.14
LINC00640-202ENST00000555801 CHIC1Q5VXU3 224 aa13.24□□□□□ -0.29
LINC00640-202ENST00000555801 SENP3Q9H4L4 574 aaPredicted RBP12.24□□□□□ -0.45
LINC00640-202ENST00000555801 POTEDQ86YR6 584 aa12.19□□□□□ -0.46
LINC00640-202ENST00000555801 PHF23Q9BUL5 403 aaPredicted RBP11.97□□□□□ -0.49
LINC00640-202ENST00000555801 FOXD1Q16676 465 aa11.49□□□□□ -0.57
LINC00640-202ENST00000555801 MSH5O43196 834 aa11.08□□□□□ -0.64
LINC00640-202ENST00000555801 DNAJC5BQ9UF47 199 aa11.02□□□□□ -0.65
LINC00640-202ENST00000555801 ABCC9O60706 1549 aa10.99□□□□□ -0.65
LINC00640-202ENST00000555801 NISCHQ9Y2I1 1504 aa10.92□□□□□ -0.66
LINC00640-202ENST00000555801 DNAJC5Q9H3Z4 198 aa10.57□□□□□ -0.72
LINC00640-202ENST00000555801 PIAS4Q8N2W9 510 aaPredicted RBP10.56□□□□□ -0.72
LINC00640-202ENST00000555801 PABPN1Q86U42 306 aaKnown RBP eCLIP10.19□□□□□ -0.78
LINC00640-202ENST00000555801 PPP6R1Q9UPN7 881 aa10.14□□□□□ -0.79
LINC00640-202ENST00000555801 ADRA2BP18089 450 aa10.07□□□□□ -0.8
LINC00640-202ENST00000555801 CACNB1Q02641 598 aaPredicted RBP10.03□□□□□ -0.8
LINC00640-202ENST00000555801 CCDC180Q9P1Z9 1646 aa10.02□□□□□ -0.81
LINC00640-202ENST00000555801 RB1CC1Q8TDY2 1594 aa9.97□□□□□ -0.81
LINC00640-202ENST00000555801 TRIM41Q8WV44 630 aa9.96□□□□□ -0.82
LINC00640-202ENST00000555801 CECR2Q9BXF3 1484 aa9.91□□□□□ -0.82
LINC00640-202ENST00000555801 DCAF8L2P0C7V8 631 aa9.8□□□□□ -0.84
LINC00640-202ENST00000555801 CC2D2AQ9P2K1 1620 aa9.8□□□□□ -0.84
LINC00640-202ENST00000555801 PLPPR3Q6T4P5 718 aa9.76□□□□□ -0.85
LINC00640-202ENST00000555801 UNC13AQ9UPW8 1703 aa9.76□□□□□ -0.85
LINC00640-202ENST00000555801 BICRAQ9NZM4 1560 aa9.75□□□□□ -0.85
LINC00640-202ENST00000555801 NACADO15069 1562 aa9.68□□□□□ -0.86
LINC00640-202ENST00000555801 CUX2O14529 1486 aa9.62□□□□□ -0.87
LINC00640-202ENST00000555801 DMRT2Q9Y5R5 561 aa9.57□□□□□ -0.88
LINC00640-202ENST00000555801 EIF4G1Q04637 1599 aaKnown RBP9.57□□□□□ -0.88
LINC00640-202ENST00000555801 ERCC6Q03468 1493 aa9.51□□□□□ -0.89
LINC00640-202ENST00000555801 MAPK8IP2Q13387 824 aaPredicted RBP9.5□□□□□ -0.89
LINC00640-202ENST00000555801 POTEHQ6S545 545 aa9.41□□□□□ -0.9
LINC00640-202ENST00000555801 RNF39Q9H2S5 420 aa9.38□□□□□ -0.91
LINC00640-202ENST00000555801 SHROOM4Q9ULL8 1493 aa9.36□□□□□ -0.91
LINC00640-202ENST00000555801 SCRIBQ14160 1630 aa9.29□□□□□ -0.92
LINC00640-202ENST00000555801 ILDR1Q86SU0 546 aaPredicted RBP9.28□□□□□ -0.92
LINC00640-202ENST00000555801 DCAF8L1A6NGE4 600 aa9.27□□□□□ -0.93
LINC00640-202ENST00000555801 TRHP20396 242 aaPredicted RBP9.26□□□□□ -0.93
LINC00640-202ENST00000555801 NESP48681 1621 aa9.23□□□□□ -0.93
LINC00640-202ENST00000555801 SCAF1Q9H7N4 1312 aaKnown RBP9.22□□□□□ -0.93
LINC00640-202ENST00000555801 MYO15BQ96JP2 1530 aa9.21□□□□□ -0.94
LINC00640-202ENST00000555801 C1QBPQ07021 282 aaKnown RBP9.2□□□□□ -0.94
LINC00640-202ENST00000555801 THOC2Q8NI27 1593 aaKnown RBP9.16□□□□□ -0.94
LINC00640-202ENST00000555801 OSCARQ8IYS5 282 aa9.16□□□□□ -0.94
LINC00640-202ENST00000555801 SMARCA2P51531 1590 aa9.15□□□□□ -0.95
LINC00640-202ENST00000555801 RIMBP3CA6NJZ7 1639 aa9.11□□□□□ -0.95
LINC00640-202ENST00000555801 RIMBP3BA6NNM3 1639 aa9.11□□□□□ -0.95
LINC00640-202ENST00000555801 RIMBP3Q9UFD9 1639 aa9.11□□□□□ -0.95
LINC00640-202ENST00000555801 BAZ1AQ9NRL2 1556 aaPredicted RBP9.1□□□□□ -0.95
LINC00640-202ENST00000555801 CYB5RLQ6IPT4 315 aa9.09□□□□□ -0.95
LINC00640-202ENST00000555801 KIF21AQ7Z4S6 1674 aa9□□□□□ -0.97
LINC00640-202ENST00000555801 ARHGEF11O15085 1522 aa9□□□□□ -0.97
LINC00640-202ENST00000555801 NCAPD3P42695 1498 aa8.98□□□□□ -0.97
LINC00640-202ENST00000555801 DCAF1Q9Y4B6 1507 aa8.94□□□□□ -0.98
LINC00640-202ENST00000555801 ZCCHC6Q5VYS8 1495 aaKnown RBP8.91□□□□□ -0.98
LINC00640-202ENST00000555801 ATAD2BQ9ULI0 1458 aa8.9□□□□□ -0.98
LINC00640-202ENST00000555801 PDS5BQ9NTI5 1447 aa8.9□□□□□ -0.98
LINC00640-202ENST00000555801 MRC2Q9UBG0 1479 aa8.89□□□□□ -0.99
LINC00640-202ENST00000555801 LAMC3Q9Y6N6 1575 aa8.88□□□□□ -0.99
LINC00640-202ENST00000555801 HOXD11P31277 338 aaPredicted RBP8.88□□□□□ -0.99
LINC00640-202ENST00000555801 ARAP1Q96P48 1450 aa8.88□□□□□ -0.99
LINC00640-202ENST00000555801 WDR62O43379 1518 aa8.85□□□□□ -0.99
LINC00640-202ENST00000555801 HMGXB3Q12766 1538 aa8.81□□□□□ -1
LINC00640-202ENST00000555801 BAZ1BQ9UIG0 1483 aaKnown RBP8.78□□□□□ -1
LINC00640-202ENST00000555801 KDM4FA0A1W2PPD8 638 aa8.74□□□□□ -1.01
LINC00640-202ENST00000555801 CADPSQ9ULU8 1353 aa8.72□□□□□ -1.01
LINC00640-202ENST00000555801 LMTK3Q96Q04 1460 aa8.71□□□□□ -1.01
LINC00640-202ENST00000555801 CEP164Q9UPV0 1460 aa8.71□□□□□ -1.01
LINC00640-202ENST00000555801 FBLN2P98095 1184 aa8.71□□□□□ -1.02
LINC00640-202ENST00000555801 ZNF608Q9ULD9 1512 aaPredicted RBP8.7□□□□□ -1.02
LINC00640-202ENST00000555801 SMARCA4P51532 1647 aa8.68□□□□□ -1.02
LINC00640-202ENST00000555801 ILDR2Q71H61 639 aa8.67□□□□□ -1.02
LINC00640-202ENST00000555801 FBXO41Q8TF61 875 aa8.66□□□□□ -1.02
LINC00640-202ENST00000555801 FANCD2Q9BXW9 1451 aa8.65□□□□□ -1.02
LINC00640-202ENST00000555801 SOCS7O14512 581 aa8.65□□□□□ -1.02
LINC00640-202ENST00000555801 URB2Q14146 1524 aaKnown RBP8.64□□□□□ -1.03
LINC00640-202ENST00000555801 CHD1O14646 1710 aa8.63□□□□□ -1.03
LINC00640-202ENST00000555801 RSF1Q96T23 1441 aaPredicted RBP8.63□□□□□ -1.03
LINC00640-202ENST00000555801 RNF216Q9NWF9 866 aaPredicted RBP8.61□□□□□ -1.03
LINC00640-202ENST00000555801 HECW2Q9P2P5 1572 aa8.57□□□□□ -1.04
LINC00640-202ENST00000555801 ERCC6L2Q5T890 1561 aa8.56□□□□□ -1.04
LINC00640-202ENST00000555801 DISP3Q9P2K9 1392 aa8.55□□□□□ -1.04
LINC00640-202ENST00000555801 IFT140Q96RY7 1462 aa8.54□□□□□ -1.04
LINC00640-202ENST00000555801 EIF4G3O43432 1585 aaKnown RBP8.53□□□□□ -1.04
LINC00640-202ENST00000555801 AQRO60306 1485 aaKnown RBP eCLIP8.53□□□□□ -1.04
LINC00640-202ENST00000555801 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.52□□□□□ -1.05
LINC00640-202ENST00000555801 DSG3P32926 999 aa8.51□□□□□ -1.05
LINC00640-202ENST00000555801 PEG3Q9GZU2 1588 aa8.51□□□□□ -1.05
LINC00640-202ENST00000555801 GAPVD1Q14C86 1478 aa8.51□□□□□ -1.05
LINC00640-202ENST00000555801 SYNJ2O15056 1496 aa8.49□□□□□ -1.05
LINC00640-202ENST00000555801 CNKSR2Q8WXI2 1034 aa8.48□□□□□ -1.05
LINC00640-202ENST00000555801 MROH2BQ7Z745 1585 aa8.48□□□□□ -1.05
LINC00640-202ENST00000555801 CLASP1Q7Z460 1538 aa8.47□□□□□ -1.05
LINC00640-202ENST00000555801 PPP4R3CPQ6ZMV5 832 aa8.46□□□□□ -1.06
LINC00640-202ENST00000555801 ADGRL1O94910 1474 aa8.45□□□□□ -1.06
LINC00640-202ENST00000555801 FAM69CQ0P6D2 419 aa8.45□□□□□ -1.06
LINC00640-202ENST00000555801 KIF13AQ9H1H9 1805 aa8.45□□□□□ -1.06
LINC00640-202ENST00000555801 CHMP7Q8WUX9 453 aaPredicted RBP8.44□□□□□ -1.06
LINC00640-202ENST00000555801 SP7Q8TDD2 431 aaPredicted RBP8.43□□□□□ -1.06
LINC00640-202ENST00000555801 CFTRP13569 1480 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms