RNA–Protein interactions for RNA: ENST00000554076.5

LIN52-202, Transcript of lin-52 DREAM MuvB core complex component, humanhuman

TSL 3

Gene LIN52, Length 585 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN52-202ENST00000554076 AEBP2Q6ZN18 517 aaPredicted RBP15.54■□□□□ 0.08
LIN52-202ENST00000554076 CHIC1Q5VXU3 224 aa14.79□□□□□ -0.04
LIN52-202ENST00000554076 NISCHQ9Y2I1 1504 aa14.64□□□□□ -0.07
LIN52-202ENST00000554076 SENP3Q9H4L4 574 aaPredicted RBP13.52□□□□□ -0.25
LIN52-202ENST00000554076 PHF23Q9BUL5 403 aaPredicted RBP13.23□□□□□ -0.29
LIN52-202ENST00000554076 CCDC180Q9P1Z9 1646 aa12.8□□□□□ -0.36
LIN52-202ENST00000554076 FOXD1Q16676 465 aa12.46□□□□□ -0.41
LIN52-202ENST00000554076 ZCCHC6Q5VYS8 1495 aaKnown RBP12.34□□□□□ -0.43
LIN52-202ENST00000554076 DCAF1Q9Y4B6 1507 aa12.18□□□□□ -0.46
LIN52-202ENST00000554076 PLPPR3Q6T4P5 718 aa12.18□□□□□ -0.46
LIN52-202ENST00000554076 SHROOM4Q9ULL8 1493 aa12□□□□□ -0.49
LIN52-202ENST00000554076 DCAF8L2P0C7V8 631 aa11.99□□□□□ -0.49
LIN52-202ENST00000554076 MYO15BQ96JP2 1530 aa11.97□□□□□ -0.49
LIN52-202ENST00000554076 MSH5O43196 834 aa11.92□□□□□ -0.5
LIN52-202ENST00000554076 NACADO15069 1562 aa11.84□□□□□ -0.51
LIN52-202ENST00000554076 ABCC9O60706 1549 aa11.76□□□□□ -0.53
LIN52-202ENST00000554076 RB1CC1Q8TDY2 1594 aa11.71□□□□□ -0.54
LIN52-202ENST00000554076 SCRIBQ14160 1630 aa11.69□□□□□ -0.54
LIN52-202ENST00000554076 POTEDQ86YR6 584 aa11.68□□□□□ -0.54
LIN52-202ENST00000554076 SUPT5HO00267 1087 aaKnown RBP11.67□□□□□ -0.54
LIN52-202ENST00000554076 PIAS4Q8N2W9 510 aaPredicted RBP11.66□□□□□ -0.54
LIN52-202ENST00000554076 PPP6R1Q9UPN7 881 aa11.47□□□□□ -0.57
LIN52-202ENST00000554076 ADRA2BP18089 450 aa11.44□□□□□ -0.58
LIN52-202ENST00000554076 RSF1Q96T23 1441 aaPredicted RBP11.38□□□□□ -0.59
LIN52-202ENST00000554076 UNC13AQ9UPW8 1703 aa11.37□□□□□ -0.59
LIN52-202ENST00000554076 BAZ1AQ9NRL2 1556 aaPredicted RBP11.37□□□□□ -0.59
LIN52-202ENST00000554076 EHMT2Q96KQ7 1210 aa11.36□□□□□ -0.59
LIN52-202ENST00000554076 KCNA4P22459 653 aa11.34□□□□□ -0.59
LIN52-202ENST00000554076 MROH2BQ7Z745 1585 aa11.25□□□□□ -0.61
LIN52-202ENST00000554076 CECR2Q9BXF3 1484 aa11.24□□□□□ -0.61
LIN52-202ENST00000554076 SMARCA4P51532 1647 aa11.24□□□□□ -0.61
LIN52-202ENST00000554076 WIZO95785 1651 aa11.2□□□□□ -0.62
LIN52-202ENST00000554076 BICRAQ9NZM4 1560 aa11.18□□□□□ -0.62
LIN52-202ENST00000554076 TOP2AP11388 1531 aaKnown RBP11.17□□□□□ -0.62
LIN52-202ENST00000554076 PEG3Q9GZU2 1588 aa11.09□□□□□ -0.63
LIN52-202ENST00000554076 SMARCA2P51531 1590 aa11.07□□□□□ -0.64
LIN52-202ENST00000554076 PABPN1Q86U42 306 aaKnown RBP eCLIP11.05□□□□□ -0.64
LIN52-202ENST00000554076 TRIM41Q8WV44 630 aa11.04□□□□□ -0.64
LIN52-202ENST00000554076 BAZ1BQ9UIG0 1483 aaKnown RBP10.98□□□□□ -0.65
LIN52-202ENST00000554076 EIF4G1Q04637 1599 aaKnown RBP10.98□□□□□ -0.65
LIN52-202ENST00000554076 CSRNP3Q8WYN3 585 aa10.97□□□□□ -0.65
LIN52-202ENST00000554076 CCDC88BA6NC98 1476 aa10.97□□□□□ -0.65
LIN52-202ENST00000554076 ATAD2BQ9ULI0 1458 aa10.95□□□□□ -0.66
LIN52-202ENST00000554076 HMGXB3Q12766 1538 aa10.92□□□□□ -0.66
LIN52-202ENST00000554076 SLC4A1APQ9BWU0 796 aaKnown RBP10.91□□□□□ -0.66
LIN52-202ENST00000554076 EEA1Q15075 1411 aa10.85□□□□□ -0.67
LIN52-202ENST00000554076 NCAPD3P42695 1498 aa10.84□□□□□ -0.67
LIN52-202ENST00000554076 PPP4R3CPQ6ZMV5 832 aa10.81□□□□□ -0.68
LIN52-202ENST00000554076 SCAF1Q9H7N4 1312 aaKnown RBP10.8□□□□□ -0.68
LIN52-202ENST00000554076 ABCC8Q09428 1581 aa10.79□□□□□ -0.68
LIN52-202ENST00000554076 WRNQ14191 1432 aaPredicted RBP eCLIP10.78□□□□□ -0.68
LIN52-202ENST00000554076 PRDM2Q13029 1718 aa10.75□□□□□ -0.69
LIN52-202ENST00000554076 LOC105371045A0A1W2PR82 267 aa10.75□□□□□ -0.69
LIN52-202ENST00000554076 FAM9AQ8IZU1 332 aaPredicted RBP10.75□□□□□ -0.69
LIN52-202ENST00000554076 NCBP3Q53F19 620 aaKnown RBP10.71□□□□□ -0.69
LIN52-202ENST00000554076 TOP2BQ02880 1626 aa10.69□□□□□ -0.7
LIN52-202ENST00000554076 BIVM-ERCC5R4GMW8 1640 aa10.69□□□□□ -0.7
LIN52-202ENST00000554076 CC2D2AQ9P2K1 1620 aa10.68□□□□□ -0.7
LIN52-202ENST00000554076 SYNJ1O43426 1573 aa10.68□□□□□ -0.7
LIN52-202ENST00000554076 CFTRP13569 1480 aa10.66□□□□□ -0.7
LIN52-202ENST00000554076 GOLGA3Q08378 1498 aa10.66□□□□□ -0.7
LIN52-202ENST00000554076 CEP164Q9UPV0 1460 aa10.64□□□□□ -0.71
LIN52-202ENST00000554076 DMRT2Q9Y5R5 561 aa10.64□□□□□ -0.71
LIN52-202ENST00000554076 KIF21BO75037 1637 aa10.64□□□□□ -0.71
LIN52-202ENST00000554076 TRIM26Q12899 539 aaPredicted RBP10.63□□□□□ -0.71
LIN52-202ENST00000554076 SOGA1O94964 1423 aa10.61□□□□□ -0.71
LIN52-202ENST00000554076 TNIKQ9UKE5 1360 aa10.61□□□□□ -0.71
LIN52-202ENST00000554076 PCGF6Q9BYE7 350 aa10.59□□□□□ -0.71
LIN52-202ENST00000554076 CADPSQ9ULU8 1353 aa10.59□□□□□ -0.71
LIN52-202ENST00000554076 NPM3O75607 178 aaKnown RBP10.58□□□□□ -0.72
LIN52-202ENST00000554076 CEP162Q5TB80 1403 aa10.56□□□□□ -0.72
LIN52-202ENST00000554076 UBTFP17480 764 aaKnown RBP10.55□□□□□ -0.72
LIN52-202ENST00000554076 ERICH3Q5RHP9 1530 aa10.54□□□□□ -0.72
LIN52-202ENST00000554076 KIF27Q86VH2 1401 aa10.54□□□□□ -0.72
LIN52-202ENST00000554076 CUX1P39880 1505 aa10.53□□□□□ -0.72
LIN52-202ENST00000554076 MAPK8IP2Q13387 824 aaPredicted RBP10.53□□□□□ -0.72
LIN52-202ENST00000554076 LAMC3Q9Y6N6 1575 aa10.52□□□□□ -0.72
LIN52-202ENST00000554076 RUSC2Q8N2Y8 1516 aa10.49□□□□□ -0.73
LIN52-202ENST00000554076 HRCP23327 699 aa10.49□□□□□ -0.73
LIN52-202ENST00000554076 FANCD2Q9BXW9 1451 aa10.49□□□□□ -0.73
LIN52-202ENST00000554076 DNMBPQ6XZF7 1577 aa10.48□□□□□ -0.73
LIN52-202ENST00000554076 ZBTB22O15209 634 aa10.47□□□□□ -0.73
LIN52-202ENST00000554076 CLIP1P30622 1438 aa10.45□□□□□ -0.74
LIN52-202ENST00000554076 ZEB1P37275 1124 aaPredicted RBP10.45□□□□□ -0.74
LIN52-202ENST00000554076 PDS5BQ9NTI5 1447 aa10.44□□□□□ -0.74
LIN52-202ENST00000554076 FGD5Q6ZNL6 1462 aa10.42□□□□□ -0.74
LIN52-202ENST00000554076 PRXQ9BXM0 1461 aa10.42□□□□□ -0.74
LIN52-202ENST00000554076 RAPGEF2Q9Y4G8 1499 aa10.42□□□□□ -0.74
LIN52-202ENST00000554076 APLP2Q06481 763 aa10.42□□□□□ -0.74
LIN52-202ENST00000554076 CUX2O14529 1486 aa10.41□□□□□ -0.74
LIN52-202ENST00000554076 VPS8Q8N3P4 1428 aa10.4□□□□□ -0.75
LIN52-202ENST00000554076 CUL7Q14999 1698 aa10.38□□□□□ -0.75
LIN52-202ENST00000554076 TOPBP1Q92547 1522 aa10.38□□□□□ -0.75
LIN52-202ENST00000554076 CNKSR2Q8WXI2 1034 aa10.37□□□□□ -0.75
LIN52-202ENST00000554076 ABCA10Q8WWZ4 1543 aa10.36□□□□□ -0.75
LIN52-202ENST00000554076 POLA1P09884 1462 aaPredicted RBP10.33□□□□□ -0.76
LIN52-202ENST00000554076 NESP48681 1621 aa10.33□□□□□ -0.76
LIN52-202ENST00000554076 SLC24A1O60721 1099 aa10.32□□□□□ -0.76
LIN52-202ENST00000554076 WDR97A6NE52 1622 aa10.32□□□□□ -0.76
LIN52-202ENST00000554076 KIF21AQ7Z4S6 1674 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms