RNA–Protein interactions for RNA: ENST00000552812.1

CACNB3-224, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

Gene CACNB3, Length 1,712 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-224ENST00000552812 AEBP2Q6ZN18 517 aaPredicted RBP30.08■■■□□ 2.41
CACNB3-224ENST00000552812 CHIC1Q5VXU3 224 aa28.15■■■□□ 2.1
CACNB3-224ENST00000552812 SENP3Q9H4L4 574 aaPredicted RBP25.8■■□□□ 1.72
CACNB3-224ENST00000552812 NISCHQ9Y2I1 1504 aa25.75■■□□□ 1.71
CACNB3-224ENST00000552812 PHF23Q9BUL5 403 aaPredicted RBP25.34■■□□□ 1.65
CACNB3-224ENST00000552812 FOXD1Q16676 465 aa24.09■■□□□ 1.45
CACNB3-224ENST00000552812 POTEDQ86YR6 584 aa23.31■■□□□ 1.32
CACNB3-224ENST00000552812 MSH5O43196 834 aa22.84■■□□□ 1.25
CACNB3-224ENST00000552812 CCDC180Q9P1Z9 1646 aa22.55■■□□□ 1.2
CACNB3-224ENST00000552812 PIAS4Q8N2W9 510 aaPredicted RBP22.35■■□□□ 1.17
CACNB3-224ENST00000552812 PLPPR3Q6T4P5 718 aa22.09■■□□□ 1.13
CACNB3-224ENST00000552812 PPP6R1Q9UPN7 881 aa22.01■■□□□ 1.11
CACNB3-224ENST00000552812 ADRA2BP18089 450 aa21.9■■□□□ 1.1
CACNB3-224ENST00000552812 ZCCHC6Q5VYS8 1495 aaKnown RBP21.63■■□□□ 1.05
CACNB3-224ENST00000552812 DCAF1Q9Y4B6 1507 aa21.36■■□□□ 1.01
CACNB3-224ENST00000552812 ABCC9O60706 1549 aa21.26■□□□□ 0.99
CACNB3-224ENST00000552812 DCAF8L2P0C7V8 631 aa21.16■□□□□ 0.98
CACNB3-224ENST00000552812 MYO15BQ96JP2 1530 aa21.16■□□□□ 0.98
CACNB3-224ENST00000552812 NACADO15069 1562 aa21■□□□□ 0.95
CACNB3-224ENST00000552812 SHROOM4Q9ULL8 1493 aa20.83■□□□□ 0.92
CACNB3-224ENST00000552812 RB1CC1Q8TDY2 1594 aa20.82■□□□□ 0.92
CACNB3-224ENST00000552812 SCRIBQ14160 1630 aa20.62■□□□□ 0.89
CACNB3-224ENST00000552812 UNC13AQ9UPW8 1703 aa20.37■□□□□ 0.85
CACNB3-224ENST00000552812 DMRT2Q9Y5R5 561 aa20.36■□□□□ 0.85
CACNB3-224ENST00000552812 MAPK8IP2Q13387 824 aaPredicted RBP20.3■□□□□ 0.84
CACNB3-224ENST00000552812 BICRAQ9NZM4 1560 aa20.16■□□□□ 0.82
CACNB3-224ENST00000552812 SCAF1Q9H7N4 1312 aaKnown RBP20.12■□□□□ 0.81
CACNB3-224ENST00000552812 SUPT5HO00267 1087 aaKnown RBP20.02■□□□□ 0.79
CACNB3-224ENST00000552812 PABPN1Q86U42 306 aaKnown RBP eCLIP20■□□□□ 0.79
CACNB3-224ENST00000552812 CECR2Q9BXF3 1484 aa19.96■□□□□ 0.79
CACNB3-224ENST00000552812 CACNB1Q02641 598 aaPredicted RBP19.94■□□□□ 0.78
CACNB3-224ENST00000552812 RSF1Q96T23 1441 aaPredicted RBP19.93■□□□□ 0.78
CACNB3-224ENST00000552812 BAZ1AQ9NRL2 1556 aaPredicted RBP19.91■□□□□ 0.78
CACNB3-224ENST00000552812 MROH2BQ7Z745 1585 aa19.86■□□□□ 0.77
CACNB3-224ENST00000552812 SMARCA4P51532 1647 aa19.82■□□□□ 0.76
CACNB3-224ENST00000552812 WIZO95785 1651 aa19.69■□□□□ 0.74
CACNB3-224ENST00000552812 PEG3Q9GZU2 1588 aa19.62■□□□□ 0.73
CACNB3-224ENST00000552812 EIF4G1Q04637 1599 aaKnown RBP19.57■□□□□ 0.72
CACNB3-224ENST00000552812 TOP2AP11388 1531 aaKnown RBP19.53■□□□□ 0.72
CACNB3-224ENST00000552812 SMARCA2P51531 1590 aa19.52■□□□□ 0.72
CACNB3-224ENST00000552812 ATAD2BQ9ULI0 1458 aa19.5■□□□□ 0.71
CACNB3-224ENST00000552812 DCAF8L1A6NGE4 600 aa19.48■□□□□ 0.71
CACNB3-224ENST00000552812 RNF39Q9H2S5 420 aa19.41■□□□□ 0.7
CACNB3-224ENST00000552812 BAZ1BQ9UIG0 1483 aaKnown RBP19.38■□□□□ 0.69
CACNB3-224ENST00000552812 HOXD11P31277 338 aaPredicted RBP19.38■□□□□ 0.69
CACNB3-224ENST00000552812 NCAPD3P42695 1498 aa19.37■□□□□ 0.69
CACNB3-224ENST00000552812 HMGXB3Q12766 1538 aa19.35■□□□□ 0.69
CACNB3-224ENST00000552812 CCDC88BA6NC98 1476 aa19.29■□□□□ 0.68
CACNB3-224ENST00000552812 CC2D2AQ9P2K1 1620 aa19.28■□□□□ 0.68
CACNB3-224ENST00000552812 PPP4R3CPQ6ZMV5 832 aa19.25■□□□□ 0.67
CACNB3-224ENST00000552812 C1QBPQ07021 282 aaKnown RBP19.11■□□□□ 0.65
CACNB3-224ENST00000552812 CNKSR2Q8WXI2 1034 aa19.07■□□□□ 0.64
CACNB3-224ENST00000552812 RNF216Q9NWF9 866 aaPredicted RBP19.06■□□□□ 0.64
CACNB3-224ENST00000552812 CFTRP13569 1480 aa18.91■□□□□ 0.62
CACNB3-224ENST00000552812 DNAJC5BQ9UF47 199 aa18.9■□□□□ 0.62
CACNB3-224ENST00000552812 TRIM41Q8WV44 630 aa18.88■□□□□ 0.61
CACNB3-224ENST00000552812 CADPSQ9ULU8 1353 aa18.85■□□□□ 0.61
CACNB3-224ENST00000552812 PRDM2Q13029 1718 aa18.84■□□□□ 0.61
CACNB3-224ENST00000552812 ABCC8Q09428 1581 aa18.84■□□□□ 0.61
CACNB3-224ENST00000552812 WRNQ14191 1432 aaPredicted RBP eCLIP18.78■□□□□ 0.6
CACNB3-224ENST00000552812 LAMC3Q9Y6N6 1575 aa18.73■□□□□ 0.59
CACNB3-224ENST00000552812 SYNJ1O43426 1573 aa18.67■□□□□ 0.58
CACNB3-224ENST00000552812 TOP2BQ02880 1626 aa18.64■□□□□ 0.58
CACNB3-224ENST00000552812 NESP48681 1621 aa18.64■□□□□ 0.57
CACNB3-224ENST00000552812 BIVM-ERCC5R4GMW8 1640 aa18.63■□□□□ 0.57
CACNB3-224ENST00000552812 FANCD2Q9BXW9 1451 aa18.63■□□□□ 0.57
CACNB3-224ENST00000552812 CUX1P39880 1505 aa18.58■□□□□ 0.57
CACNB3-224ENST00000552812 PDS5BQ9NTI5 1447 aa18.57■□□□□ 0.56
CACNB3-224ENST00000552812 CEP164Q9UPV0 1460 aa18.53■□□□□ 0.56
CACNB3-224ENST00000552812 EEA1Q15075 1411 aa18.52■□□□□ 0.55
CACNB3-224ENST00000552812 DNMBPQ6XZF7 1577 aa18.47■□□□□ 0.55
CACNB3-224ENST00000552812 SOGA1O94964 1423 aa18.46■□□□□ 0.55
CACNB3-224ENST00000552812 KIF21AQ7Z4S6 1674 aa18.45■□□□□ 0.54
CACNB3-224ENST00000552812 FAM9AQ8IZU1 332 aaPredicted RBP18.45■□□□□ 0.54
CACNB3-224ENST00000552812 NCBP3Q53F19 620 aaKnown RBP18.44■□□□□ 0.54
CACNB3-224ENST00000552812 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.43■□□□□ 0.54
CACNB3-224ENST00000552812 TOPBP1Q92547 1522 aa18.42■□□□□ 0.54
CACNB3-224ENST00000552812 FGD5Q6ZNL6 1462 aa18.39■□□□□ 0.54
CACNB3-224ENST00000552812 URB2Q14146 1524 aaKnown RBP18.38■□□□□ 0.53
CACNB3-224ENST00000552812 RUSC2Q8N2Y8 1516 aa18.38■□□□□ 0.53
CACNB3-224ENST00000552812 LOC105371045A0A1W2PR82 267 aa18.37■□□□□ 0.53
CACNB3-224ENST00000552812 CSRNP3Q8WYN3 585 aa18.35■□□□□ 0.53
CACNB3-224ENST00000552812 MRC2Q9UBG0 1479 aa18.33■□□□□ 0.52
CACNB3-224ENST00000552812 POLA1P09884 1462 aaPredicted RBP18.32■□□□□ 0.52
CACNB3-224ENST00000552812 KIF27Q86VH2 1401 aa18.32■□□□□ 0.52
CACNB3-224ENST00000552812 ERCC6Q03468 1493 aa18.27■□□□□ 0.52
CACNB3-224ENST00000552812 ABCA10Q8WWZ4 1543 aa18.27■□□□□ 0.51
CACNB3-224ENST00000552812 KIF21BO75037 1637 aa18.26■□□□□ 0.51
CACNB3-224ENST00000552812 WDR62O43379 1518 aa18.25■□□□□ 0.51
CACNB3-224ENST00000552812 CUX2O14529 1486 aa18.25■□□□□ 0.51
CACNB3-224ENST00000552812 RAD54L2Q9Y4B4 1467 aa18.22■□□□□ 0.51
CACNB3-224ENST00000552812 GOLGA3Q08378 1498 aa18.22■□□□□ 0.51
CACNB3-224ENST00000552812 WDR97A6NE52 1622 aa18.21■□□□□ 0.51
CACNB3-224ENST00000552812 THOC2Q8NI27 1593 aaKnown RBP18.2■□□□□ 0.5
CACNB3-224ENST00000552812 PRXQ9BXM0 1461 aa18.18■□□□□ 0.5
CACNB3-224ENST00000552812 TARBP1Q13395 1621 aaKnown RBP18.16■□□□□ 0.5
CACNB3-224ENST00000552812 ERICH3Q5RHP9 1530 aa18.16■□□□□ 0.5
CACNB3-224ENST00000552812 POTEHQ6S545 545 aa18.15■□□□□ 0.5
CACNB3-224ENST00000552812 TNIKQ9UKE5 1360 aa18.14■□□□□ 0.49
CACNB3-224ENST00000552812 EHMT2Q96KQ7 1210 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms