RNA–Protein interactions for RNA: ENST00000552411.1

RMST-206, rhabdomyosarcoma 2 associated transcript, humanhuman

TSL 3

Gene RMST, Length 656 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RMST-206ENST00000552411 AEBP2Q6ZN18 517 aaPredicted RBP20.51■□□□□ 0.87
RMST-206ENST00000552411 CHIC1Q5VXU3 224 aa19.76■□□□□ 0.75
RMST-206ENST00000552411 SENP3Q9H4L4 574 aaPredicted RBP17.53■□□□□ 0.4
RMST-206ENST00000552411 PHF23Q9BUL5 403 aaPredicted RBP17.31■□□□□ 0.36
RMST-206ENST00000552411 NISCHQ9Y2I1 1504 aa16.73■□□□□ 0.27
RMST-206ENST00000552411 FOXD1Q16676 465 aa16.26■□□□□ 0.19
RMST-206ENST00000552411 PLPPR3Q6T4P5 718 aa15.94■□□□□ 0.14
RMST-206ENST00000552411 PPP6R1Q9UPN7 881 aa15.37■□□□□ 0.05
RMST-206ENST00000552411 ADRA2BP18089 450 aa15.36■□□□□ 0.05
RMST-206ENST00000552411 PIAS4Q8N2W9 510 aaPredicted RBP15.29■□□□□ 0.04
RMST-206ENST00000552411 ABCC9O60706 1549 aa15.24■□□□□ 0.03
RMST-206ENST00000552411 MSH5O43196 834 aa15.17■□□□□ 0.02
RMST-206ENST00000552411 CCDC180Q9P1Z9 1646 aa15.14■□□□□ 0.01
RMST-206ENST00000552411 DNAJC5BQ9UF47 199 aa14.5□□□□□ -0.09
RMST-206ENST00000552411 RB1CC1Q8TDY2 1594 aa14.45□□□□□ -0.1
RMST-206ENST00000552411 POTEDQ86YR6 584 aa14.34□□□□□ -0.11
RMST-206ENST00000552411 NACADO15069 1562 aa14.32□□□□□ -0.12
RMST-206ENST00000552411 UNC13AQ9UPW8 1703 aa14.18□□□□□ -0.14
RMST-206ENST00000552411 SCAF1Q9H7N4 1312 aaKnown RBP14.14□□□□□ -0.15
RMST-206ENST00000552411 MYO15BQ96JP2 1530 aa14.11□□□□□ -0.15
RMST-206ENST00000552411 BICRAQ9NZM4 1560 aa14.1□□□□□ -0.15
RMST-206ENST00000552411 PABPN1Q86U42 306 aaKnown RBP eCLIP14.1□□□□□ -0.15
RMST-206ENST00000552411 MAPK8IP2Q13387 824 aaPredicted RBP14.02□□□□□ -0.17
RMST-206ENST00000552411 DCAF8L2P0C7V8 631 aa14□□□□□ -0.17
RMST-206ENST00000552411 PPP4R3CPQ6ZMV5 832 aa13.98□□□□□ -0.17
RMST-206ENST00000552411 DMRT2Q9Y5R5 561 aa13.91□□□□□ -0.18
RMST-206ENST00000552411 SHROOM4Q9ULL8 1493 aa13.89□□□□□ -0.19
RMST-206ENST00000552411 DCAF1Q9Y4B6 1507 aa13.85□□□□□ -0.19
RMST-206ENST00000552411 ZCCHC6Q5VYS8 1495 aaKnown RBP13.85□□□□□ -0.19
RMST-206ENST00000552411 CC2D2AQ9P2K1 1620 aa13.79□□□□□ -0.2
RMST-206ENST00000552411 CECR2Q9BXF3 1484 aa13.76□□□□□ -0.21
RMST-206ENST00000552411 EIF4G1Q04637 1599 aaKnown RBP13.72□□□□□ -0.21
RMST-206ENST00000552411 SCRIBQ14160 1630 aa13.71□□□□□ -0.22
RMST-206ENST00000552411 CNKSR2Q8WXI2 1034 aa13.68□□□□□ -0.22
RMST-206ENST00000552411 NCBP3Q53F19 620 aaKnown RBP13.57□□□□□ -0.24
RMST-206ENST00000552411 HOXD11P31277 338 aaPredicted RBP13.51□□□□□ -0.25
RMST-206ENST00000552411 RNF216Q9NWF9 866 aaPredicted RBP13.49□□□□□ -0.25
RMST-206ENST00000552411 DNAJC5Q9H3Z4 198 aa13.44□□□□□ -0.26
RMST-206ENST00000552411 DCAF8L1A6NGE4 600 aa13.35□□□□□ -0.27
RMST-206ENST00000552411 NPM3O75607 178 aaKnown RBP13.3□□□□□ -0.28
RMST-206ENST00000552411 KCNA4P22459 653 aa13.26□□□□□ -0.29
RMST-206ENST00000552411 CUX2O14529 1486 aa13.25□□□□□ -0.29
RMST-206ENST00000552411 NCAPD3P42695 1498 aa13.23□□□□□ -0.29
RMST-206ENST00000552411 ATAD2BQ9ULI0 1458 aa13.15□□□□□ -0.3
RMST-206ENST00000552411 HMGXB3Q12766 1538 aa13.13□□□□□ -0.31
RMST-206ENST00000552411 ERCC6Q03468 1493 aa13.13□□□□□ -0.31
RMST-206ENST00000552411 SMARCA4P51532 1647 aa13.1□□□□□ -0.31
RMST-206ENST00000552411 SMARCA2P51531 1590 aa13.1□□□□□ -0.31
RMST-206ENST00000552411 NESP48681 1621 aa13.06□□□□□ -0.32
RMST-206ENST00000552411 THOC2Q8NI27 1593 aaKnown RBP13.03□□□□□ -0.32
RMST-206ENST00000552411 PEG3Q9GZU2 1588 aa13.02□□□□□ -0.33
RMST-206ENST00000552411 BAZ1AQ9NRL2 1556 aaPredicted RBP12.98□□□□□ -0.33
RMST-206ENST00000552411 BAZ1BQ9UIG0 1483 aaKnown RBP12.97□□□□□ -0.33
RMST-206ENST00000552411 LAMC3Q9Y6N6 1575 aa12.95□□□□□ -0.34
RMST-206ENST00000552411 RNF39Q9H2S5 420 aa12.95□□□□□ -0.34
RMST-206ENST00000552411 KIF21AQ7Z4S6 1674 aa12.91□□□□□ -0.34
RMST-206ENST00000552411 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.89□□□□□ -0.35
RMST-206ENST00000552411 MROH2BQ7Z745 1585 aa12.89□□□□□ -0.35
RMST-206ENST00000552411 CACNB1Q02641 598 aaPredicted RBP12.86□□□□□ -0.35
RMST-206ENST00000552411 PDS5BQ9NTI5 1447 aa12.84□□□□□ -0.35
RMST-206ENST00000552411 C1QBPQ07021 282 aaKnown RBP12.8□□□□□ -0.36
RMST-206ENST00000552411 CADPSQ9ULU8 1353 aa12.78□□□□□ -0.36
RMST-206ENST00000552411 MRC2Q9UBG0 1479 aa12.78□□□□□ -0.36
RMST-206ENST00000552411 WDR62O43379 1518 aa12.78□□□□□ -0.36
RMST-206ENST00000552411 WIZO95785 1651 aa12.7□□□□□ -0.38
RMST-206ENST00000552411 CEP164Q9UPV0 1460 aa12.66□□□□□ -0.38
RMST-206ENST00000552411 TRIM41Q8WV44 630 aa12.66□□□□□ -0.38
RMST-206ENST00000552411 FANCD2Q9BXW9 1451 aa12.64□□□□□ -0.39
RMST-206ENST00000552411 SLC4A2P04920 1241 aa12.63□□□□□ -0.39
RMST-206ENST00000552411 CFTRP13569 1480 aa12.63□□□□□ -0.39
RMST-206ENST00000552411 U3KPZ7 1027 aaPredicted RBP12.61□□□□□ -0.39
RMST-206ENST00000552411 SLC4A1APQ9BWU0 796 aaKnown RBP12.6□□□□□ -0.39
RMST-206ENST00000552411 URB2Q14146 1524 aaKnown RBP12.58□□□□□ -0.4
RMST-206ENST00000552411 TOP2AP11388 1531 aaKnown RBP12.55□□□□□ -0.4
RMST-206ENST00000552411 RSF1Q96T23 1441 aaPredicted RBP12.54□□□□□ -0.4
RMST-206ENST00000552411 OSCARQ8IYS5 282 aa12.53□□□□□ -0.4
RMST-206ENST00000552411 PRDM2Q13029 1718 aa12.52□□□□□ -0.41
RMST-206ENST00000552411 RIMBP3CA6NJZ7 1639 aa12.48□□□□□ -0.41
RMST-206ENST00000552411 RIMBP3BA6NNM3 1639 aa12.48□□□□□ -0.41
RMST-206ENST00000552411 RIMBP3Q9UFD9 1639 aa12.48□□□□□ -0.41
RMST-206ENST00000552411 ZNF608Q9ULD9 1512 aaPredicted RBP12.44□□□□□ -0.42
RMST-206ENST00000552411 IFT140Q96RY7 1462 aa12.43□□□□□ -0.42
RMST-206ENST00000552411 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.42□□□□□ -0.42
RMST-206ENST00000552411 HNRNPUL2Q1KMD3 747 aaKnown RBP12.42□□□□□ -0.42
RMST-206ENST00000552411 ARHGEF11O15085 1522 aa12.41□□□□□ -0.42
RMST-206ENST00000552411 TOPBP1Q92547 1522 aa12.4□□□□□ -0.42
RMST-206ENST00000552411 CCDC88BA6NC98 1476 aa12.39□□□□□ -0.43
RMST-206ENST00000552411 APLP2Q06481 763 aa12.38□□□□□ -0.43
RMST-206ENST00000552411 EIF4G3O43432 1585 aaKnown RBP12.38□□□□□ -0.43
RMST-206ENST00000552411 CAPN15O75808 1086 aa12.35□□□□□ -0.43
RMST-206ENST00000552411 DNMBPQ6XZF7 1577 aa12.35□□□□□ -0.43
RMST-206ENST00000552411 MYCNP04198 464 aaPredicted RBP12.34□□□□□ -0.43
RMST-206ENST00000552411 SPINK5Q9NQ38 1064 aaPredicted RBP12.34□□□□□ -0.43
RMST-206ENST00000552411 TARBP1Q13395 1621 aaKnown RBP12.33□□□□□ -0.43
RMST-206ENST00000552411 SAMD1Q6SPF0 538 aaPredicted RBP12.33□□□□□ -0.44
RMST-206ENST00000552411 FOXD4L1Q9NU39 408 aa12.33□□□□□ -0.44
RMST-206ENST00000552411 ABCC8Q09428 1581 aa12.33□□□□□ -0.44
RMST-206ENST00000552411 CHD1O14646 1710 aa12.32□□□□□ -0.44
RMST-206ENST00000552411 ARAP1Q96P48 1450 aa12.29□□□□□ -0.44
RMST-206ENST00000552411 AQRO60306 1485 aaKnown RBP eCLIP12.27□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms