RNA–Protein interactions for RNA: ENST00000552065.1

TTC41P-207, Transcript of tetratricopeptide repeat domain 41, pseudogene, humanhuman

TSL 3

Gene TTC41P, Length 699 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC41P-207ENST00000552065 AEBP2Q6ZN18 517 aaPredicted RBP20.08■□□□□ 0.81
TTC41P-207ENST00000552065 CHIC1Q5VXU3 224 aa19.43■□□□□ 0.7
TTC41P-207ENST00000552065 NISCHQ9Y2I1 1504 aa17.51■□□□□ 0.39
TTC41P-207ENST00000552065 SENP3Q9H4L4 574 aaPredicted RBP17.14■□□□□ 0.33
TTC41P-207ENST00000552065 PHF23Q9BUL5 403 aaPredicted RBP17.03■□□□□ 0.32
TTC41P-207ENST00000552065 FOXD1Q16676 465 aa15.91■□□□□ 0.14
TTC41P-207ENST00000552065 PLPPR3Q6T4P5 718 aa15.71■□□□□ 0.11
TTC41P-207ENST00000552065 CCDC180Q9P1Z9 1646 aa15.49■□□□□ 0.07
TTC41P-207ENST00000552065 ADRA2BP18089 450 aa15.11■□□□□ 0.01
TTC41P-207ENST00000552065 PPP6R1Q9UPN7 881 aa15.11■□□□□ 0.01
TTC41P-207ENST00000552065 PIAS4Q8N2W9 510 aaPredicted RBP14.98□□□□□ -0.01
TTC41P-207ENST00000552065 MSH5O43196 834 aa14.8□□□□□ -0.04
TTC41P-207ENST00000552065 ZCCHC6Q5VYS8 1495 aaKnown RBP14.72□□□□□ -0.05
TTC41P-207ENST00000552065 ABCC9O60706 1549 aa14.64□□□□□ -0.07
TTC41P-207ENST00000552065 DCAF1Q9Y4B6 1507 aa14.5□□□□□ -0.09
TTC41P-207ENST00000552065 MYO15BQ96JP2 1530 aa14.38□□□□□ -0.11
TTC41P-207ENST00000552065 NACADO15069 1562 aa14.36□□□□□ -0.11
TTC41P-207ENST00000552065 DCAF8L2P0C7V8 631 aa14.35□□□□□ -0.11
TTC41P-207ENST00000552065 RB1CC1Q8TDY2 1594 aa14.3□□□□□ -0.12
TTC41P-207ENST00000552065 SCRIBQ14160 1630 aa14.17□□□□□ -0.14
TTC41P-207ENST00000552065 SHROOM4Q9ULL8 1493 aa14.12□□□□□ -0.15
TTC41P-207ENST00000552065 UNC13AQ9UPW8 1703 aa14.1□□□□□ -0.15
TTC41P-207ENST00000552065 SCAF1Q9H7N4 1312 aaKnown RBP13.89□□□□□ -0.19
TTC41P-207ENST00000552065 BICRAQ9NZM4 1560 aa13.84□□□□□ -0.19
TTC41P-207ENST00000552065 POTEDQ86YR6 584 aa13.84□□□□□ -0.19
TTC41P-207ENST00000552065 PPP4R3CPQ6ZMV5 832 aa13.8□□□□□ -0.2
TTC41P-207ENST00000552065 MAPK8IP2Q13387 824 aaPredicted RBP13.78□□□□□ -0.2
TTC41P-207ENST00000552065 PABPN1Q86U42 306 aaKnown RBP eCLIP13.66□□□□□ -0.22
TTC41P-207ENST00000552065 DMRT2Q9Y5R5 561 aa13.62□□□□□ -0.23
TTC41P-207ENST00000552065 CECR2Q9BXF3 1484 aa13.58□□□□□ -0.24
TTC41P-207ENST00000552065 BAZ1AQ9NRL2 1556 aaPredicted RBP13.58□□□□□ -0.24
TTC41P-207ENST00000552065 SMARCA4P51532 1647 aa13.57□□□□□ -0.24
TTC41P-207ENST00000552065 MROH2BQ7Z745 1585 aa13.52□□□□□ -0.25
TTC41P-207ENST00000552065 CNKSR2Q8WXI2 1034 aa13.47□□□□□ -0.25
TTC41P-207ENST00000552065 RSF1Q96T23 1441 aaPredicted RBP13.47□□□□□ -0.25
TTC41P-207ENST00000552065 EIF4G1Q04637 1599 aaKnown RBP13.45□□□□□ -0.26
TTC41P-207ENST00000552065 WIZO95785 1651 aa13.44□□□□□ -0.26
TTC41P-207ENST00000552065 SUPT5HO00267 1087 aaKnown RBP13.43□□□□□ -0.26
TTC41P-207ENST00000552065 NCBP3Q53F19 620 aaKnown RBP13.42□□□□□ -0.26
TTC41P-207ENST00000552065 PEG3Q9GZU2 1588 aa13.38□□□□□ -0.27
TTC41P-207ENST00000552065 SMARCA2P51531 1590 aa13.34□□□□□ -0.27
TTC41P-207ENST00000552065 TOP2AP11388 1531 aaKnown RBP13.32□□□□□ -0.28
TTC41P-207ENST00000552065 CC2D2AQ9P2K1 1620 aa13.29□□□□□ -0.28
TTC41P-207ENST00000552065 ATAD2BQ9ULI0 1458 aa13.29□□□□□ -0.28
TTC41P-207ENST00000552065 HMGXB3Q12766 1538 aa13.26□□□□□ -0.29
TTC41P-207ENST00000552065 BAZ1BQ9UIG0 1483 aaKnown RBP13.25□□□□□ -0.29
TTC41P-207ENST00000552065 RNF216Q9NWF9 866 aaPredicted RBP13.25□□□□□ -0.29
TTC41P-207ENST00000552065 HOXD11P31277 338 aaPredicted RBP13.23□□□□□ -0.29
TTC41P-207ENST00000552065 KCNA4P22459 653 aa13.21□□□□□ -0.29
TTC41P-207ENST00000552065 NCAPD3P42695 1498 aa13.17□□□□□ -0.3
TTC41P-207ENST00000552065 NPM3O75607 178 aaKnown RBP13.17□□□□□ -0.3
TTC41P-207ENST00000552065 DCAF8L1A6NGE4 600 aa13.15□□□□□ -0.3
TTC41P-207ENST00000552065 CCDC88BA6NC98 1476 aa13.08□□□□□ -0.32
TTC41P-207ENST00000552065 PRDM2Q13029 1718 aa13.01□□□□□ -0.33
TTC41P-207ENST00000552065 DNAJC5BQ9UF47 199 aa12.89□□□□□ -0.35
TTC41P-207ENST00000552065 CFTRP13569 1480 aa12.86□□□□□ -0.35
TTC41P-207ENST00000552065 LAMC3Q9Y6N6 1575 aa12.86□□□□□ -0.35
TTC41P-207ENST00000552065 ABCC8Q09428 1581 aa12.83□□□□□ -0.36
TTC41P-207ENST00000552065 CADPSQ9ULU8 1353 aa12.81□□□□□ -0.36
TTC41P-207ENST00000552065 NESP48681 1621 aa12.8□□□□□ -0.36
TTC41P-207ENST00000552065 KIF21AQ7Z4S6 1674 aa12.77□□□□□ -0.36
TTC41P-207ENST00000552065 SYNJ1O43426 1573 aa12.74□□□□□ -0.37
TTC41P-207ENST00000552065 BIVM-ERCC5R4GMW8 1640 aa12.73□□□□□ -0.37
TTC41P-207ENST00000552065 FANCD2Q9BXW9 1451 aa12.73□□□□□ -0.37
TTC41P-207ENST00000552065 WRNQ14191 1432 aaPredicted RBP eCLIP12.71□□□□□ -0.37
TTC41P-207ENST00000552065 CEP164Q9UPV0 1460 aa12.71□□□□□ -0.38
TTC41P-207ENST00000552065 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.7□□□□□ -0.38
TTC41P-207ENST00000552065 TOP2BQ02880 1626 aa12.7□□□□□ -0.38
TTC41P-207ENST00000552065 PDS5BQ9NTI5 1447 aa12.67□□□□□ -0.38
TTC41P-207ENST00000552065 CUX1P39880 1505 aa12.67□□□□□ -0.38
TTC41P-207ENST00000552065 DNMBPQ6XZF7 1577 aa12.65□□□□□ -0.38
TTC41P-207ENST00000552065 TRIM41Q8WV44 630 aa12.64□□□□□ -0.39
TTC41P-207ENST00000552065 RNF39Q9H2S5 420 aa12.62□□□□□ -0.39
TTC41P-207ENST00000552065 ERCC6Q03468 1493 aa12.59□□□□□ -0.39
TTC41P-207ENST00000552065 URB2Q14146 1524 aaKnown RBP12.59□□□□□ -0.39
TTC41P-207ENST00000552065 TOPBP1Q92547 1522 aa12.59□□□□□ -0.39
TTC41P-207ENST00000552065 THOC2Q8NI27 1593 aaKnown RBP12.59□□□□□ -0.39
TTC41P-207ENST00000552065 MRC2Q9UBG0 1479 aa12.59□□□□□ -0.39
TTC41P-207ENST00000552065 SLC4A1APQ9BWU0 796 aaKnown RBP12.58□□□□□ -0.4
TTC41P-207ENST00000552065 FGD5Q6ZNL6 1462 aa12.56□□□□□ -0.4
TTC41P-207ENST00000552065 WDR62O43379 1518 aa12.55□□□□□ -0.4
TTC41P-207ENST00000552065 WDR97A6NE52 1622 aa12.54□□□□□ -0.4
TTC41P-207ENST00000552065 CACNB1Q02641 598 aaPredicted RBP12.52□□□□□ -0.41
TTC41P-207ENST00000552065 POLA1P09884 1462 aaPredicted RBP12.51□□□□□ -0.41
TTC41P-207ENST00000552065 C1QBPQ07021 282 aaKnown RBP12.48□□□□□ -0.41
TTC41P-207ENST00000552065 SOGA1O94964 1423 aa12.46□□□□□ -0.41
TTC41P-207ENST00000552065 EEA1Q15075 1411 aa12.46□□□□□ -0.41
TTC41P-207ENST00000552065 SLC4A2P04920 1241 aa12.46□□□□□ -0.41
TTC41P-207ENST00000552065 TARBP1Q13395 1621 aaKnown RBP12.45□□□□□ -0.42
TTC41P-207ENST00000552065 RUSC2Q8N2Y8 1516 aa12.43□□□□□ -0.42
TTC41P-207ENST00000552065 ABCA10Q8WWZ4 1543 aa12.43□□□□□ -0.42
TTC41P-207ENST00000552065 RAD54L2Q9Y4B4 1467 aa12.43□□□□□ -0.42
TTC41P-207ENST00000552065 ABCA5Q8WWZ7 1642 aa12.43□□□□□ -0.42
TTC41P-207ENST00000552065 CUX2O14529 1486 aa12.42□□□□□ -0.42
TTC41P-207ENST00000552065 FAM9AQ8IZU1 332 aaPredicted RBP12.41□□□□□ -0.42
TTC41P-207ENST00000552065 PBRM1Q86U86 1689 aa12.41□□□□□ -0.42
TTC41P-207ENST00000552065 KIF27Q86VH2 1401 aa12.4□□□□□ -0.42
TTC41P-207ENST00000552065 U3KPZ7 1027 aaPredicted RBP12.39□□□□□ -0.43
TTC41P-207ENST00000552065 KIF21BO75037 1637 aa12.39□□□□□ -0.43
TTC41P-207ENST00000552065 IFT140Q96RY7 1462 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms