RNA–Protein interactions for RNA: ENST00000550248.2

ATP2A2-209, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 2, humanhuman

TSL 4

Gene ATP2A2, Length 544 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A2-209ENST00000550248 AEBP2Q6ZN18 517 aaPredicted RBP18.74■□□□□ 0.59
ATP2A2-209ENST00000550248 CHIC1Q5VXU3 224 aa17.78■□□□□ 0.44
ATP2A2-209ENST00000550248 NISCHQ9Y2I1 1504 aa16.55■□□□□ 0.24
ATP2A2-209ENST00000550248 SENP3Q9H4L4 574 aaPredicted RBP15.9■□□□□ 0.14
ATP2A2-209ENST00000550248 PHF23Q9BUL5 403 aaPredicted RBP15.74■□□□□ 0.11
ATP2A2-209ENST00000550248 FOXD1Q16676 465 aa14.87□□□□□ -0.03
ATP2A2-209ENST00000550248 CCDC180Q9P1Z9 1646 aa14.35□□□□□ -0.11
ATP2A2-209ENST00000550248 PLPPR3Q6T4P5 718 aa14.17□□□□□ -0.14
ATP2A2-209ENST00000550248 ZCCHC6Q5VYS8 1495 aaKnown RBP13.99□□□□□ -0.17
ATP2A2-209ENST00000550248 PPP6R1Q9UPN7 881 aa13.95□□□□□ -0.18
ATP2A2-209ENST00000550248 ADRA2BP18089 450 aa13.88□□□□□ -0.19
ATP2A2-209ENST00000550248 MSH5O43196 834 aa13.85□□□□□ -0.19
ATP2A2-209ENST00000550248 PIAS4Q8N2W9 510 aaPredicted RBP13.85□□□□□ -0.19
ATP2A2-209ENST00000550248 DCAF1Q9Y4B6 1507 aa13.74□□□□□ -0.21
ATP2A2-209ENST00000550248 SHROOM4Q9ULL8 1493 aa13.63□□□□□ -0.23
ATP2A2-209ENST00000550248 POTEDQ86YR6 584 aa13.54□□□□□ -0.24
ATP2A2-209ENST00000550248 MYO15BQ96JP2 1530 aa13.47□□□□□ -0.25
ATP2A2-209ENST00000550248 DCAF8L2P0C7V8 631 aa13.46□□□□□ -0.25
ATP2A2-209ENST00000550248 SUPT5HO00267 1087 aaKnown RBP13.28□□□□□ -0.28
ATP2A2-209ENST00000550248 NACADO15069 1562 aa13.28□□□□□ -0.28
ATP2A2-209ENST00000550248 ABCC9O60706 1549 aa13.17□□□□□ -0.3
ATP2A2-209ENST00000550248 SCRIBQ14160 1630 aa13.16□□□□□ -0.3
ATP2A2-209ENST00000550248 RB1CC1Q8TDY2 1594 aa13.07□□□□□ -0.32
ATP2A2-209ENST00000550248 RSF1Q96T23 1441 aaPredicted RBP12.94□□□□□ -0.34
ATP2A2-209ENST00000550248 UNC13AQ9UPW8 1703 aa12.79□□□□□ -0.36
ATP2A2-209ENST00000550248 BAZ1AQ9NRL2 1556 aaPredicted RBP12.78□□□□□ -0.36
ATP2A2-209ENST00000550248 CECR2Q9BXF3 1484 aa12.78□□□□□ -0.36
ATP2A2-209ENST00000550248 MROH2BQ7Z745 1585 aa12.77□□□□□ -0.37
ATP2A2-209ENST00000550248 MAPK8IP2Q13387 824 aaPredicted RBP12.76□□□□□ -0.37
ATP2A2-209ENST00000550248 WIZO95785 1651 aa12.69□□□□□ -0.38
ATP2A2-209ENST00000550248 SMARCA4P51532 1647 aa12.66□□□□□ -0.38
ATP2A2-209ENST00000550248 DMRT2Q9Y5R5 561 aa12.64□□□□□ -0.39
ATP2A2-209ENST00000550248 SCAF1Q9H7N4 1312 aaKnown RBP12.62□□□□□ -0.39
ATP2A2-209ENST00000550248 BICRAQ9NZM4 1560 aa12.62□□□□□ -0.39
ATP2A2-209ENST00000550248 TOP2AP11388 1531 aaKnown RBP12.62□□□□□ -0.39
ATP2A2-209ENST00000550248 EIF4G1Q04637 1599 aaKnown RBP12.52□□□□□ -0.4
ATP2A2-209ENST00000550248 PEG3Q9GZU2 1588 aa12.52□□□□□ -0.4
ATP2A2-209ENST00000550248 TRIM41Q8WV44 630 aa12.51□□□□□ -0.41
ATP2A2-209ENST00000550248 SMARCA2P51531 1590 aa12.48□□□□□ -0.41
ATP2A2-209ENST00000550248 PPP4R3CPQ6ZMV5 832 aa12.45□□□□□ -0.42
ATP2A2-209ENST00000550248 PABPN1Q86U42 306 aaKnown RBP eCLIP12.44□□□□□ -0.42
ATP2A2-209ENST00000550248 CCDC88BA6NC98 1476 aa12.44□□□□□ -0.42
ATP2A2-209ENST00000550248 LOC105371045A0A1W2PR82 267 aa12.37□□□□□ -0.43
ATP2A2-209ENST00000550248 ATAD2BQ9ULI0 1458 aa12.36□□□□□ -0.43
ATP2A2-209ENST00000550248 BAZ1BQ9UIG0 1483 aaKnown RBP12.32□□□□□ -0.44
ATP2A2-209ENST00000550248 ABCC8Q09428 1581 aa12.26□□□□□ -0.45
ATP2A2-209ENST00000550248 HMGXB3Q12766 1538 aa12.26□□□□□ -0.45
ATP2A2-209ENST00000550248 EEA1Q15075 1411 aa12.25□□□□□ -0.45
ATP2A2-209ENST00000550248 FAM9AQ8IZU1 332 aaPredicted RBP12.22□□□□□ -0.45
ATP2A2-209ENST00000550248 NCAPD3P42695 1498 aa12.21□□□□□ -0.45
ATP2A2-209ENST00000550248 HOXD11P31277 338 aaPredicted RBP12.2□□□□□ -0.46
ATP2A2-209ENST00000550248 CNKSR2Q8WXI2 1034 aa12.2□□□□□ -0.46
ATP2A2-209ENST00000550248 WRNQ14191 1432 aaPredicted RBP eCLIP12.19□□□□□ -0.46
ATP2A2-209ENST00000550248 PCGF6Q9BYE7 350 aa12.18□□□□□ -0.46
ATP2A2-209ENST00000550248 TRIM26Q12899 539 aaPredicted RBP12.17□□□□□ -0.46
ATP2A2-209ENST00000550248 HRCP23327 699 aa12.15□□□□□ -0.46
ATP2A2-209ENST00000550248 KCNA4P22459 653 aa12.13□□□□□ -0.47
ATP2A2-209ENST00000550248 SYNJ1O43426 1573 aa12.11□□□□□ -0.47
ATP2A2-209ENST00000550248 RNF216Q9NWF9 866 aaPredicted RBP12.09□□□□□ -0.47
ATP2A2-209ENST00000550248 SOGA1O94964 1423 aa12.09□□□□□ -0.47
ATP2A2-209ENST00000550248 TOP2BQ02880 1626 aa12.08□□□□□ -0.48
ATP2A2-209ENST00000550248 BIVM-ERCC5R4GMW8 1640 aa12.08□□□□□ -0.48
ATP2A2-209ENST00000550248 TNIKQ9UKE5 1360 aa12.07□□□□□ -0.48
ATP2A2-209ENST00000550248 DCAF8L1A6NGE4 600 aa12.06□□□□□ -0.48
ATP2A2-209ENST00000550248 CSRNP3Q8WYN3 585 aa12.06□□□□□ -0.48
ATP2A2-209ENST00000550248 KIF21BO75037 1637 aa12.06□□□□□ -0.48
ATP2A2-209ENST00000550248 GOLGA3Q08378 1498 aa12.06□□□□□ -0.48
ATP2A2-209ENST00000550248 PRDM2Q13029 1718 aa12.06□□□□□ -0.48
ATP2A2-209ENST00000550248 CFTRP13569 1480 aa12.02□□□□□ -0.48
ATP2A2-209ENST00000550248 CEP164Q9UPV0 1460 aa12.02□□□□□ -0.48
ATP2A2-209ENST00000550248 NCBP3Q53F19 620 aaKnown RBP12.02□□□□□ -0.49
ATP2A2-209ENST00000550248 CEP162Q5TB80 1403 aa12.01□□□□□ -0.49
ATP2A2-209ENST00000550248 RUSC2Q8N2Y8 1516 aa12.01□□□□□ -0.49
ATP2A2-209ENST00000550248 EHMT2Q96KQ7 1210 aa11.99□□□□□ -0.49
ATP2A2-209ENST00000550248 CC2D2AQ9P2K1 1620 aa11.96□□□□□ -0.5
ATP2A2-209ENST00000550248 CUX1P39880 1505 aa11.93□□□□□ -0.5
ATP2A2-209ENST00000550248 ERICH3Q5RHP9 1530 aa11.92□□□□□ -0.5
ATP2A2-209ENST00000550248 NPM3O75607 178 aaKnown RBP11.92□□□□□ -0.5
ATP2A2-209ENST00000550248 UBTFP17480 764 aaKnown RBP11.92□□□□□ -0.5
ATP2A2-209ENST00000550248 ZEB1P37275 1124 aaPredicted RBP11.92□□□□□ -0.5
ATP2A2-209ENST00000550248 CADPSQ9ULU8 1353 aa11.91□□□□□ -0.5
ATP2A2-209ENST00000550248 KIF27Q86VH2 1401 aa11.87□□□□□ -0.51
ATP2A2-209ENST00000550248 CACNB1Q02641 598 aaPredicted RBP11.87□□□□□ -0.51
ATP2A2-209ENST00000550248 RNF39Q9H2S5 420 aa11.86□□□□□ -0.51
ATP2A2-209ENST00000550248 PRXQ9BXM0 1461 aa11.86□□□□□ -0.51
ATP2A2-209ENST00000550248 RAPGEF2Q9Y4G8 1499 aa11.85□□□□□ -0.51
ATP2A2-209ENST00000550248 CLIP1P30622 1438 aa11.85□□□□□ -0.51
ATP2A2-209ENST00000550248 VPS8Q8N3P4 1428 aa11.81□□□□□ -0.52
ATP2A2-209ENST00000550248 FANCD2Q9BXW9 1451 aa11.78□□□□□ -0.52
ATP2A2-209ENST00000550248 DNMBPQ6XZF7 1577 aa11.77□□□□□ -0.53
ATP2A2-209ENST00000550248 LAMC3Q9Y6N6 1575 aa11.77□□□□□ -0.53
ATP2A2-209ENST00000550248 DNAJC5BQ9UF47 199 aa11.77□□□□□ -0.53
ATP2A2-209ENST00000550248 FGD5Q6ZNL6 1462 aa11.76□□□□□ -0.53
ATP2A2-209ENST00000550248 CUX2O14529 1486 aa11.74□□□□□ -0.53
ATP2A2-209ENST00000550248 PPARGC1BQ86YN6 1023 aaKnown RBP11.73□□□□□ -0.53
ATP2A2-209ENST00000550248 APLP2Q06481 763 aa11.7□□□□□ -0.54
ATP2A2-209ENST00000550248 TOPBP1Q92547 1522 aa11.7□□□□□ -0.54
ATP2A2-209ENST00000550248 ARAP1Q96P48 1450 aa11.69□□□□□ -0.54
ATP2A2-209ENST00000550248 ABCA10Q8WWZ4 1543 aa11.68□□□□□ -0.54
ATP2A2-209ENST00000550248 IGF1RP08069 1367 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms