RNA–Protein interactions for RNA: ENST00000549324.1

RPH3A-214, Transcript of rabphilin 3A, humanhuman

TSL 4

Gene RPH3A, Length 2,349 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3A-214ENST00000549324 NISCHQ9Y2I1 1504 aa23.11■■□□□ 1.29
RPH3A-214ENST00000549324 CCDC180Q9P1Z9 1646 aa20.21■□□□□ 0.83
RPH3A-214ENST00000549324 HRCP23327 699 aa19.63■□□□□ 0.73
RPH3A-214ENST00000549324 PELP1Q8IZL8 1130 aaKnown RBP19.5■□□□□ 0.71
RPH3A-214ENST00000549324 ZCCHC6Q5VYS8 1495 aaKnown RBP19.41■□□□□ 0.7
RPH3A-214ENST00000549324 ABCC9O60706 1549 aa19.21■□□□□ 0.67
RPH3A-214ENST00000549324 PPARGC1BQ86YN6 1023 aaKnown RBP19.09■□□□□ 0.65
RPH3A-214ENST00000549324 DCAF1Q9Y4B6 1507 aa19.09■□□□□ 0.65
RPH3A-214ENST00000549324 DCAF8L2P0C7V8 631 aa19.08■□□□□ 0.64
RPH3A-214ENST00000549324 PCGF6Q9BYE7 350 aa18.98■□□□□ 0.63
RPH3A-214ENST00000549324 MYO15BQ96JP2 1530 aa18.9■□□□□ 0.62
RPH3A-214ENST00000549324 MYT1Q01538 1121 aa18.86■□□□□ 0.61
RPH3A-214ENST00000549324 NACADO15069 1562 aa18.82■□□□□ 0.6
RPH3A-214ENST00000549324 SHROOM4Q9ULL8 1493 aa18.78■□□□□ 0.6
RPH3A-214ENST00000549324 SCAF1Q9H7N4 1312 aaKnown RBP18.72■□□□□ 0.59
RPH3A-214ENST00000549324 RB1CC1Q8TDY2 1594 aa18.69■□□□□ 0.58
RPH3A-214ENST00000549324 SUPT5HO00267 1087 aaKnown RBP18.65■□□□□ 0.58
RPH3A-214ENST00000549324 SCRIBQ14160 1630 aa18.59■□□□□ 0.57
RPH3A-214ENST00000549324 CHIC1Q5VXU3 224 aa18.55■□□□□ 0.56
RPH3A-214ENST00000549324 UNC13AQ9UPW8 1703 aa18.39■□□□□ 0.53
RPH3A-214ENST00000549324 ZEB1P37275 1124 aaPredicted RBP18.37■□□□□ 0.53
RPH3A-214ENST00000549324 TRIM26Q12899 539 aaPredicted RBP18.36■□□□□ 0.53
RPH3A-214ENST00000549324 ACIN1Q9UKV3 1341 aaKnown RBP18.18■□□□□ 0.5
RPH3A-214ENST00000549324 BICRAQ9NZM4 1560 aa18.17■□□□□ 0.5
RPH3A-214ENST00000549324 LOC105371045A0A1W2PR82 267 aa18.08■□□□□ 0.48
RPH3A-214ENST00000549324 NEUROD1Q13562 356 aa18.07■□□□□ 0.48
RPH3A-214ENST00000549324 PABPN1Q86U42 306 aaKnown RBP eCLIP18.07■□□□□ 0.48
RPH3A-214ENST00000549324 GTF3C3Q9Y5Q9 886 aa18.01■□□□□ 0.47
RPH3A-214ENST00000549324 CECR2Q9BXF3 1484 aa17.99■□□□□ 0.47
RPH3A-214ENST00000549324 CENPBP07199 599 aaPredicted RBP17.91■□□□□ 0.46
RPH3A-214ENST00000549324 RSF1Q96T23 1441 aaPredicted RBP17.89■□□□□ 0.45
RPH3A-214ENST00000549324 MROH2BQ7Z745 1585 aa17.87■□□□□ 0.45
RPH3A-214ENST00000549324 BAZ1AQ9NRL2 1556 aaPredicted RBP17.85■□□□□ 0.45
RPH3A-214ENST00000549324 TTBK1Q5TCY1 1321 aaPredicted RBP17.83■□□□□ 0.44
RPH3A-214ENST00000549324 SMARCA4P51532 1647 aa17.8■□□□□ 0.44
RPH3A-214ENST00000549324 WIZO95785 1651 aa17.73■□□□□ 0.43
RPH3A-214ENST00000549324 DIEXFQ68CQ4 756 aaKnown RBP17.67■□□□□ 0.42
RPH3A-214ENST00000549324 EIF4G1Q04637 1599 aaKnown RBP17.62■□□□□ 0.41
RPH3A-214ENST00000549324 PEG3Q9GZU2 1588 aa17.58■□□□□ 0.41
RPH3A-214ENST00000549324 ATAD2BQ9ULI0 1458 aa17.52■□□□□ 0.4
RPH3A-214ENST00000549324 TOP2AP11388 1531 aaKnown RBP17.51■□□□□ 0.39
RPH3A-214ENST00000549324 BCL11AQ9H165 835 aa17.5■□□□□ 0.39
RPH3A-214ENST00000549324 SMARCA2P51531 1590 aa17.49■□□□□ 0.39
RPH3A-214ENST00000549324 CCER1Q8TC90 406 aaPredicted RBP17.47■□□□□ 0.39
RPH3A-214ENST00000549324 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.47■□□□□ 0.39
RPH3A-214ENST00000549324 TRIM41Q8WV44 630 aa17.42■□□□□ 0.38
RPH3A-214ENST00000549324 BAZ1BQ9UIG0 1483 aaKnown RBP17.41■□□□□ 0.38
RPH3A-214ENST00000549324 CC2D2AQ9P2K1 1620 aa17.39■□□□□ 0.37
RPH3A-214ENST00000549324 NCAPD3P42695 1498 aa17.37■□□□□ 0.37
RPH3A-214ENST00000549324 HMGXB3Q12766 1538 aa17.36■□□□□ 0.37
RPH3A-214ENST00000549324 FAM9AQ8IZU1 332 aaPredicted RBP17.35■□□□□ 0.37
RPH3A-214ENST00000549324 YTHDC1Q96MU7 727 aaKnown RBP17.34■□□□□ 0.37
RPH3A-214ENST00000549324 ANP32EQ9BTT0 268 aa17.33■□□□□ 0.37
RPH3A-214ENST00000549324 CCDC88BA6NC98 1476 aa17.33■□□□□ 0.36
RPH3A-214ENST00000549324 ZNF316A6NFI3 1004 aaPredicted RBP17.26■□□□□ 0.35
RPH3A-214ENST00000549324 CLSPNQ9HAW4 1339 aa17.17■□□□□ 0.34
RPH3A-214ENST00000549324 MIER1Q8N108 512 aa17.16■□□□□ 0.34
RPH3A-214ENST00000549324 CSRNP3Q8WYN3 585 aa17.11■□□□□ 0.33
RPH3A-214ENST00000549324 TSHZ2Q9NRE2 1034 aa17.11■□□□□ 0.33
RPH3A-214ENST00000549324 SUPT16HQ9Y5B9 1047 aaKnown RBP17.1■□□□□ 0.33
RPH3A-214ENST00000549324 EHMT2Q96KQ7 1210 aa17.08■□□□□ 0.33
RPH3A-214ENST00000549324 DNAJC5BQ9UF47 199 aa17.04■□□□□ 0.32
RPH3A-214ENST00000549324 PRKCSHP14314 528 aaPredicted RBP17.03■□□□□ 0.32
RPH3A-214ENST00000549324 CFTRP13569 1480 aa16.97■□□□□ 0.31
RPH3A-214ENST00000549324 ABCC8Q09428 1581 aa16.97■□□□□ 0.31
RPH3A-214ENST00000549324 CADPSQ9ULU8 1353 aa16.91■□□□□ 0.3
RPH3A-214ENST00000549324 PRDM2Q13029 1718 aa16.91■□□□□ 0.3
RPH3A-214ENST00000549324 WRNQ14191 1432 aaPredicted RBP eCLIP16.9■□□□□ 0.3
RPH3A-214ENST00000549324 NESP48681 1621 aa16.85■□□□□ 0.29
RPH3A-214ENST00000549324 LAMC3Q9Y6N6 1575 aa16.81■□□□□ 0.28
RPH3A-214ENST00000549324 SYNJ1O43426 1573 aa16.81■□□□□ 0.28
RPH3A-214ENST00000549324 FANCD2Q9BXW9 1451 aa16.75■□□□□ 0.27
RPH3A-214ENST00000549324 ERICH6Q7L0X2 663 aa16.73■□□□□ 0.27
RPH3A-214ENST00000549324 TOP2BQ02880 1626 aa16.72■□□□□ 0.27
RPH3A-214ENST00000549324 BIVM-ERCC5R4GMW8 1640 aa16.72■□□□□ 0.27
RPH3A-214ENST00000549324 CUX1P39880 1505 aa16.71■□□□□ 0.27
RPH3A-214ENST00000549324 CEP162Q5TB80 1403 aa16.68■□□□□ 0.26
RPH3A-214ENST00000549324 RBM19Q9Y4C8 960 aaKnown RBP16.67■□□□□ 0.26
RPH3A-214ENST00000549324 KIF21AQ7Z4S6 1674 aa16.66■□□□□ 0.26
RPH3A-214ENST00000549324 PDS5BQ9NTI5 1447 aa16.65■□□□□ 0.26
RPH3A-214ENST00000549324 CEP164Q9UPV0 1460 aa16.65■□□□□ 0.26
RPH3A-214ENST00000549324 SOGA1O94964 1423 aa16.6■□□□□ 0.25
RPH3A-214ENST00000549324 BCANQ96GW7 911 aa16.59■□□□□ 0.25
RPH3A-214ENST00000549324 DNMBPQ6XZF7 1577 aa16.58■□□□□ 0.24
RPH3A-214ENST00000549324 URB2Q14146 1524 aaKnown RBP16.57■□□□□ 0.24
RPH3A-214ENST00000549324 RUSC2Q8N2Y8 1516 aa16.56■□□□□ 0.24
RPH3A-214ENST00000549324 TOPBP1Q92547 1522 aa16.56■□□□□ 0.24
RPH3A-214ENST00000549324 MSH5O43196 834 aa16.55■□□□□ 0.24
RPH3A-214ENST00000549324 TNIKQ9UKE5 1360 aa16.54■□□□□ 0.24
RPH3A-214ENST00000549324 FGD5Q6ZNL6 1462 aa16.54■□□□□ 0.24
RPH3A-214ENST00000549324 FKBP8Q14318 412 aa16.53■□□□□ 0.24
RPH3A-214ENST00000549324 HNRNPUL2Q1KMD3 747 aaKnown RBP16.53■□□□□ 0.24
RPH3A-214ENST00000549324 APLP2Q06481 763 aa16.51■□□□□ 0.23
RPH3A-214ENST00000549324 EEA1Q15075 1411 aa16.5■□□□□ 0.23
RPH3A-214ENST00000549324 POLA1P09884 1462 aaPredicted RBP16.48■□□□□ 0.23
RPH3A-214ENST00000549324 MYT1LQ9UL68 1186 aa16.47■□□□□ 0.23
RPH3A-214ENST00000549324 MRC2Q9UBG0 1479 aa16.47■□□□□ 0.23
RPH3A-214ENST00000549324 ERCC6Q03468 1493 aa16.45■□□□□ 0.22
RPH3A-214ENST00000549324 FANCIQ9NVI1 1328 aa16.45■□□□□ 0.22
RPH3A-214ENST00000549324 AEBP2Q6ZN18 517 aaPredicted RBP16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms