RNA–Protein interactions for RNA: ENST00000547273.1

PPFIA2-208, Transcript of PTPRF interacting protein alpha 2, humanhuman

TSL 3

Gene PPFIA2, Length 371 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-208ENST00000547273 AEBP2Q6ZN18 517 aaPredicted RBP22.05■■□□□ 1.12
PPFIA2-208ENST00000547273 CHIC1Q5VXU3 224 aa21.6■■□□□ 1.05
PPFIA2-208ENST00000547273 NISCHQ9Y2I1 1504 aa19.16■□□□□ 0.66
PPFIA2-208ENST00000547273 SENP3Q9H4L4 574 aaPredicted RBP18.93■□□□□ 0.62
PPFIA2-208ENST00000547273 PHF23Q9BUL5 403 aaPredicted RBP18.86■□□□□ 0.61
PPFIA2-208ENST00000547273 PLPPR3Q6T4P5 718 aa17.56■□□□□ 0.4
PPFIA2-208ENST00000547273 FOXD1Q16676 465 aa17.49■□□□□ 0.39
PPFIA2-208ENST00000547273 CCDC180Q9P1Z9 1646 aa17.03■□□□□ 0.32
PPFIA2-208ENST00000547273 ADRA2BP18089 450 aa16.63■□□□□ 0.25
PPFIA2-208ENST00000547273 PPP6R1Q9UPN7 881 aa16.63■□□□□ 0.25
PPFIA2-208ENST00000547273 POTEDQ86YR6 584 aa16.48■□□□□ 0.23
PPFIA2-208ENST00000547273 PIAS4Q8N2W9 510 aaPredicted RBP16.47■□□□□ 0.23
PPFIA2-208ENST00000547273 MSH5O43196 834 aa16.29■□□□□ 0.2
PPFIA2-208ENST00000547273 ABCC9O60706 1549 aa16.18■□□□□ 0.18
PPFIA2-208ENST00000547273 ZCCHC6Q5VYS8 1495 aaKnown RBP16.08■□□□□ 0.16
PPFIA2-208ENST00000547273 DCAF1Q9Y4B6 1507 aa15.93■□□□□ 0.14
PPFIA2-208ENST00000547273 MYO15BQ96JP2 1530 aa15.88■□□□□ 0.13
PPFIA2-208ENST00000547273 NACADO15069 1562 aa15.84■□□□□ 0.13
PPFIA2-208ENST00000547273 RB1CC1Q8TDY2 1594 aa15.79■□□□□ 0.12
PPFIA2-208ENST00000547273 DCAF8L2P0C7V8 631 aa15.67■□□□□ 0.1
PPFIA2-208ENST00000547273 UNC13AQ9UPW8 1703 aa15.51■□□□□ 0.07
PPFIA2-208ENST00000547273 SCRIBQ14160 1630 aa15.48■□□□□ 0.07
PPFIA2-208ENST00000547273 SCAF1Q9H7N4 1312 aaKnown RBP15.46■□□□□ 0.07
PPFIA2-208ENST00000547273 PPP4R3CPQ6ZMV5 832 aa15.39■□□□□ 0.05
PPFIA2-208ENST00000547273 BICRAQ9NZM4 1560 aa15.29■□□□□ 0.04
PPFIA2-208ENST00000547273 SHROOM4Q9ULL8 1493 aa15.23■□□□□ 0.03
PPFIA2-208ENST00000547273 NCBP3Q53F19 620 aaKnown RBP15.1■□□□□ 0.01
PPFIA2-208ENST00000547273 MAPK8IP2Q13387 824 aaPredicted RBP15.07■□□□□ 0
PPFIA2-208ENST00000547273 PABPN1Q86U42 306 aaKnown RBP eCLIP15.07■□□□□ 0
PPFIA2-208ENST00000547273 CNKSR2Q8WXI2 1034 aa15.05■□□□□ -0
PPFIA2-208ENST00000547273 DMRT2Q9Y5R5 561 aa15.05■□□□□ -0
PPFIA2-208ENST00000547273 BAZ1AQ9NRL2 1556 aaPredicted RBP14.87□□□□□ -0.03
PPFIA2-208ENST00000547273 EIF4G1Q04637 1599 aaKnown RBP14.86□□□□□ -0.03
PPFIA2-208ENST00000547273 SMARCA4P51532 1647 aa14.86□□□□□ -0.03
PPFIA2-208ENST00000547273 KCNA4P22459 653 aa14.86□□□□□ -0.03
PPFIA2-208ENST00000547273 CECR2Q9BXF3 1484 aa14.84□□□□□ -0.03
PPFIA2-208ENST00000547273 RNF216Q9NWF9 866 aaPredicted RBP14.78□□□□□ -0.04
PPFIA2-208ENST00000547273 MROH2BQ7Z745 1585 aa14.77□□□□□ -0.05
PPFIA2-208ENST00000547273 NPM3O75607 178 aaKnown RBP14.72□□□□□ -0.05
PPFIA2-208ENST00000547273 HOXD11P31277 338 aaPredicted RBP14.72□□□□□ -0.05
PPFIA2-208ENST00000547273 CC2D2AQ9P2K1 1620 aa14.71□□□□□ -0.05
PPFIA2-208ENST00000547273 PEG3Q9GZU2 1588 aa14.71□□□□□ -0.05
PPFIA2-208ENST00000547273 RSF1Q96T23 1441 aaPredicted RBP14.68□□□□□ -0.06
PPFIA2-208ENST00000547273 SMARCA2P51531 1590 aa14.68□□□□□ -0.06
PPFIA2-208ENST00000547273 WIZO95785 1651 aa14.65□□□□□ -0.06
PPFIA2-208ENST00000547273 ATAD2BQ9ULI0 1458 aa14.62□□□□□ -0.07
PPFIA2-208ENST00000547273 HMGXB3Q12766 1538 aa14.61□□□□□ -0.07
PPFIA2-208ENST00000547273 NCAPD3P42695 1498 aa14.56□□□□□ -0.08
PPFIA2-208ENST00000547273 BAZ1BQ9UIG0 1483 aaKnown RBP14.55□□□□□ -0.08
PPFIA2-208ENST00000547273 TOP2AP11388 1531 aaKnown RBP14.55□□□□□ -0.08
PPFIA2-208ENST00000547273 DNAJC5BQ9UF47 199 aa14.5□□□□□ -0.09
PPFIA2-208ENST00000547273 SUPT5HO00267 1087 aaKnown RBP14.44□□□□□ -0.1
PPFIA2-208ENST00000547273 DCAF8L1A6NGE4 600 aa14.33□□□□□ -0.12
PPFIA2-208ENST00000547273 CCDC88BA6NC98 1476 aa14.28□□□□□ -0.12
PPFIA2-208ENST00000547273 PRDM2Q13029 1718 aa14.24□□□□□ -0.13
PPFIA2-208ENST00000547273 SLC4A1APQ9BWU0 796 aaKnown RBP14.22□□□□□ -0.13
PPFIA2-208ENST00000547273 CACNB1Q02641 598 aaPredicted RBP14.2□□□□□ -0.14
PPFIA2-208ENST00000547273 LAMC3Q9Y6N6 1575 aa14.19□□□□□ -0.14
PPFIA2-208ENST00000547273 CFTRP13569 1480 aa14.15□□□□□ -0.14
PPFIA2-208ENST00000547273 CADPSQ9ULU8 1353 aa14.12□□□□□ -0.15
PPFIA2-208ENST00000547273 NESP48681 1621 aa14.1□□□□□ -0.15
PPFIA2-208ENST00000547273 KIF21AQ7Z4S6 1674 aa14.05□□□□□ -0.16
PPFIA2-208ENST00000547273 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.02□□□□□ -0.17
PPFIA2-208ENST00000547273 PDS5BQ9NTI5 1447 aa14.01□□□□□ -0.17
PPFIA2-208ENST00000547273 FANCD2Q9BXW9 1451 aa14□□□□□ -0.17
PPFIA2-208ENST00000547273 CEP164Q9UPV0 1460 aa13.99□□□□□ -0.17
PPFIA2-208ENST00000547273 RNF39Q9H2S5 420 aa13.97□□□□□ -0.17
PPFIA2-208ENST00000547273 ERCC6Q03468 1493 aa13.95□□□□□ -0.18
PPFIA2-208ENST00000547273 THOC2Q8NI27 1593 aaKnown RBP13.93□□□□□ -0.18
PPFIA2-208ENST00000547273 MRC2Q9UBG0 1479 aa13.9□□□□□ -0.18
PPFIA2-208ENST00000547273 ABCC8Q09428 1581 aa13.9□□□□□ -0.18
PPFIA2-208ENST00000547273 DNMBPQ6XZF7 1577 aa13.89□□□□□ -0.19
PPFIA2-208ENST00000547273 BIVM-ERCC5R4GMW8 1640 aa13.89□□□□□ -0.19
PPFIA2-208ENST00000547273 SLC4A2P04920 1241 aa13.88□□□□□ -0.19
PPFIA2-208ENST00000547273 WDR62O43379 1518 aa13.87□□□□□ -0.19
PPFIA2-208ENST00000547273 WRNQ14191 1432 aaPredicted RBP eCLIP13.86□□□□□ -0.19
PPFIA2-208ENST00000547273 SYNJ1O43426 1573 aa13.86□□□□□ -0.19
PPFIA2-208ENST00000547273 TOP2BQ02880 1626 aa13.86□□□□□ -0.19
PPFIA2-208ENST00000547273 URB2Q14146 1524 aaKnown RBP13.85□□□□□ -0.19
PPFIA2-208ENST00000547273 CUX1P39880 1505 aa13.85□□□□□ -0.19
PPFIA2-208ENST00000547273 FOXD4L1Q9NU39 408 aa13.83□□□□□ -0.2
PPFIA2-208ENST00000547273 TOPBP1Q92547 1522 aa13.83□□□□□ -0.2
PPFIA2-208ENST00000547273 C1QBPQ07021 282 aaKnown RBP13.77□□□□□ -0.21
PPFIA2-208ENST00000547273 FGD5Q6ZNL6 1462 aa13.74□□□□□ -0.21
PPFIA2-208ENST00000547273 POLA1P09884 1462 aaPredicted RBP13.74□□□□□ -0.21
PPFIA2-208ENST00000547273 WDR97A6NE52 1622 aa13.73□□□□□ -0.21
PPFIA2-208ENST00000547273 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.73□□□□□ -0.21
PPFIA2-208ENST00000547273 HNRNPUL2Q1KMD3 747 aaKnown RBP13.73□□□□□ -0.21
PPFIA2-208ENST00000547273 U3KPZ7 1027 aaPredicted RBP13.72□□□□□ -0.21
PPFIA2-208ENST00000547273 CUX2O14529 1486 aa13.72□□□□□ -0.21
PPFIA2-208ENST00000547273 MYCNP04198 464 aaPredicted RBP13.71□□□□□ -0.21
PPFIA2-208ENST00000547273 TARBP1Q13395 1621 aaKnown RBP13.69□□□□□ -0.22
PPFIA2-208ENST00000547273 IFT140Q96RY7 1462 aa13.67□□□□□ -0.22
PPFIA2-208ENST00000547273 APLP2Q06481 763 aa13.66□□□□□ -0.22
PPFIA2-208ENST00000547273 ABCA10Q8WWZ4 1543 aa13.64□□□□□ -0.23
PPFIA2-208ENST00000547273 TRIM41Q8WV44 630 aa13.63□□□□□ -0.23
PPFIA2-208ENST00000547273 ABCA5Q8WWZ7 1642 aa13.62□□□□□ -0.23
PPFIA2-208ENST00000547273 ZBTB22O15209 634 aa13.62□□□□□ -0.23
PPFIA2-208ENST00000547273 SAMD1Q6SPF0 538 aaPredicted RBP13.62□□□□□ -0.23
PPFIA2-208ENST00000547273 SOGA1O94964 1423 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms