RNA–Protein interactions for RNA: ENST00000546839.5

ERGIC2-203, Transcript of ERGIC and golgi 2, humanhuman

TSL 5

Gene ERGIC2, Length 1,274 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC2-203ENST00000546839 AEBP2Q6ZN18 517 aaPredicted RBP31.97■■■□□ 2.71
ERGIC2-203ENST00000546839 CHIC1Q5VXU3 224 aa31.32■■■□□ 2.6
ERGIC2-203ENST00000546839 NISCHQ9Y2I1 1504 aa28.4■■■□□ 2.14
ERGIC2-203ENST00000546839 PHF23Q9BUL5 403 aaPredicted RBP27.53■■■□□ 2
ERGIC2-203ENST00000546839 SENP3Q9H4L4 574 aaPredicted RBP27.16■■□□□ 1.94
ERGIC2-203ENST00000546839 PLPPR3Q6T4P5 718 aa25.48■■□□□ 1.67
ERGIC2-203ENST00000546839 FOXD1Q16676 465 aa25.17■■□□□ 1.62
ERGIC2-203ENST00000546839 CCDC180Q9P1Z9 1646 aa25.09■■□□□ 1.61
ERGIC2-203ENST00000546839 ABCC9O60706 1549 aa24.79■■□□□ 1.56
ERGIC2-203ENST00000546839 ADRA2BP18089 450 aa24.27■■□□□ 1.48
ERGIC2-203ENST00000546839 PPP6R1Q9UPN7 881 aa24.27■■□□□ 1.48
ERGIC2-203ENST00000546839 DCAF8L2P0C7V8 631 aa23.92■■□□□ 1.42
ERGIC2-203ENST00000546839 PIAS4Q8N2W9 510 aaPredicted RBP23.78■■□□□ 1.4
ERGIC2-203ENST00000546839 NACADO15069 1562 aa23.73■■□□□ 1.39
ERGIC2-203ENST00000546839 RB1CC1Q8TDY2 1594 aa23.73■■□□□ 1.39
ERGIC2-203ENST00000546839 MYO15BQ96JP2 1530 aa23.59■■□□□ 1.37
ERGIC2-203ENST00000546839 ZCCHC6Q5VYS8 1495 aaKnown RBP23.57■■□□□ 1.36
ERGIC2-203ENST00000546839 DCAF1Q9Y4B6 1507 aa23.46■■□□□ 1.35
ERGIC2-203ENST00000546839 PABPN1Q86U42 306 aaKnown RBP eCLIP23.3■■□□□ 1.32
ERGIC2-203ENST00000546839 MSH5O43196 834 aa23.22■■□□□ 1.31
ERGIC2-203ENST00000546839 UNC13AQ9UPW8 1703 aa23.13■■□□□ 1.29
ERGIC2-203ENST00000546839 BICRAQ9NZM4 1560 aa23.09■■□□□ 1.29
ERGIC2-203ENST00000546839 DNAJC5BQ9UF47 199 aa23.06■■□□□ 1.28
ERGIC2-203ENST00000546839 SCRIBQ14160 1630 aa22.94■■□□□ 1.26
ERGIC2-203ENST00000546839 SHROOM4Q9ULL8 1493 aa22.73■■□□□ 1.23
ERGIC2-203ENST00000546839 PPP4R3CPQ6ZMV5 832 aa22.46■■□□□ 1.19
ERGIC2-203ENST00000546839 EIF4G1Q04637 1599 aaKnown RBP22.43■■□□□ 1.18
ERGIC2-203ENST00000546839 CC2D2AQ9P2K1 1620 aa22.36■■□□□ 1.17
ERGIC2-203ENST00000546839 CECR2Q9BXF3 1484 aa22.28■■□□□ 1.16
ERGIC2-203ENST00000546839 SCAF1Q9H7N4 1312 aaKnown RBP22.25■■□□□ 1.15
ERGIC2-203ENST00000546839 NCAPD3P42695 1498 aa22.01■■□□□ 1.11
ERGIC2-203ENST00000546839 KCNA4P22459 653 aa22■■□□□ 1.11
ERGIC2-203ENST00000546839 MAPK8IP2Q13387 824 aaPredicted RBP21.99■■□□□ 1.11
ERGIC2-203ENST00000546839 ATAD2BQ9ULI0 1458 aa21.97■■□□□ 1.11
ERGIC2-203ENST00000546839 SMARCA4P51532 1647 aa21.96■■□□□ 1.11
ERGIC2-203ENST00000546839 BAZ1AQ9NRL2 1556 aaPredicted RBP21.94■■□□□ 1.1
ERGIC2-203ENST00000546839 NCBP3Q53F19 620 aaKnown RBP21.92■■□□□ 1.1
ERGIC2-203ENST00000546839 MROH2BQ7Z745 1585 aa21.91■■□□□ 1.1
ERGIC2-203ENST00000546839 SMARCA2P51531 1590 aa21.85■■□□□ 1.09
ERGIC2-203ENST00000546839 CNKSR2Q8WXI2 1034 aa21.82■■□□□ 1.08
ERGIC2-203ENST00000546839 PEG3Q9GZU2 1588 aa21.78■■□□□ 1.08
ERGIC2-203ENST00000546839 HMGXB3Q12766 1538 aa21.73■■□□□ 1.07
ERGIC2-203ENST00000546839 BAZ1BQ9UIG0 1483 aaKnown RBP21.71■■□□□ 1.07
ERGIC2-203ENST00000546839 RSF1Q96T23 1441 aaPredicted RBP21.69■■□□□ 1.06
ERGIC2-203ENST00000546839 DMRT2Q9Y5R5 561 aa21.68■■□□□ 1.06
ERGIC2-203ENST00000546839 WIZO95785 1651 aa21.6■■□□□ 1.05
ERGIC2-203ENST00000546839 NPM3O75607 178 aaKnown RBP21.55■■□□□ 1.04
ERGIC2-203ENST00000546839 NESP48681 1621 aa21.46■■□□□ 1.03
ERGIC2-203ENST00000546839 CADPSQ9ULU8 1353 aa21.37■■□□□ 1.01
ERGIC2-203ENST00000546839 RNF216Q9NWF9 866 aaPredicted RBP21.37■■□□□ 1.01
ERGIC2-203ENST00000546839 TOP2AP11388 1531 aaKnown RBP21.33■■□□□ 1
ERGIC2-203ENST00000546839 ERCC6Q03468 1493 aa21.3■■□□□ 1
ERGIC2-203ENST00000546839 LAMC3Q9Y6N6 1575 aa21.29■■□□□ 1
ERGIC2-203ENST00000546839 HOXD11P31277 338 aaPredicted RBP21.25■□□□□ 0.99
ERGIC2-203ENST00000546839 PDS5BQ9NTI5 1447 aa21.25■□□□□ 0.99
ERGIC2-203ENST00000546839 CCDC88BA6NC98 1476 aa21.22■□□□□ 0.99
ERGIC2-203ENST00000546839 CFTRP13569 1480 aa21.19■□□□□ 0.98
ERGIC2-203ENST00000546839 SUPT5HO00267 1087 aaKnown RBP21.15■□□□□ 0.98
ERGIC2-203ENST00000546839 CUX2O14529 1486 aa21.12■□□□□ 0.97
ERGIC2-203ENST00000546839 FANCD2Q9BXW9 1451 aa21.04■□□□□ 0.96
ERGIC2-203ENST00000546839 KIF21AQ7Z4S6 1674 aa21.04■□□□□ 0.96
ERGIC2-203ENST00000546839 POTEDQ86YR6 584 aa21■□□□□ 0.95
ERGIC2-203ENST00000546839 THOC2Q8NI27 1593 aaKnown RBP20.99■□□□□ 0.95
ERGIC2-203ENST00000546839 SLC4A1APQ9BWU0 796 aaKnown RBP20.99■□□□□ 0.95
ERGIC2-203ENST00000546839 MRC2Q9UBG0 1479 aa20.97■□□□□ 0.95
ERGIC2-203ENST00000546839 CEP164Q9UPV0 1460 aa20.96■□□□□ 0.95
ERGIC2-203ENST00000546839 WDR62O43379 1518 aa20.87■□□□□ 0.93
ERGIC2-203ENST00000546839 URB2Q14146 1524 aaKnown RBP20.84■□□□□ 0.93
ERGIC2-203ENST00000546839 DNAJC5Q9H3Z4 198 aa20.78■□□□□ 0.92
ERGIC2-203ENST00000546839 DCAF8L1A6NGE4 600 aa20.77■□□□□ 0.92
ERGIC2-203ENST00000546839 PRDM2Q13029 1718 aa20.75■□□□□ 0.91
ERGIC2-203ENST00000546839 ABCC8Q09428 1581 aa20.7■□□□□ 0.9
ERGIC2-203ENST00000546839 TOPBP1Q92547 1522 aa20.69■□□□□ 0.9
ERGIC2-203ENST00000546839 DNMBPQ6XZF7 1577 aa20.59■□□□□ 0.89
ERGIC2-203ENST00000546839 IFT140Q96RY7 1462 aa20.57■□□□□ 0.88
ERGIC2-203ENST00000546839 CUX1P39880 1505 aa20.53■□□□□ 0.88
ERGIC2-203ENST00000546839 ZNF608Q9ULD9 1512 aaPredicted RBP20.53■□□□□ 0.88
ERGIC2-203ENST00000546839 SOGA1O94964 1423 aa20.52■□□□□ 0.87
ERGIC2-203ENST00000546839 POLA1P09884 1462 aaPredicted RBP20.51■□□□□ 0.87
ERGIC2-203ENST00000546839 RAD54L2Q9Y4B4 1467 aa20.49■□□□□ 0.87
ERGIC2-203ENST00000546839 EHMT2Q96KQ7 1210 aa20.46■□□□□ 0.87
ERGIC2-203ENST00000546839 AQRO60306 1485 aaKnown RBP eCLIP20.45■□□□□ 0.861e-6■■■□□ 18.1
ERGIC2-203ENST00000546839 TARBP1Q13395 1621 aaKnown RBP20.44■□□□□ 0.86
ERGIC2-203ENST00000546839 FGD5Q6ZNL6 1462 aa20.43■□□□□ 0.86
ERGIC2-203ENST00000546839 OSCARQ8IYS5 282 aa20.43■□□□□ 0.86
ERGIC2-203ENST00000546839 TDRD9Q8NDG6 1382 aaKnown RBP20.43■□□□□ 0.86
ERGIC2-203ENST00000546839 WRNQ14191 1432 aaPredicted RBP eCLIP20.38■□□□□ 0.85
ERGIC2-203ENST00000546839 SLC4A2P04920 1241 aa20.33■□□□□ 0.85
ERGIC2-203ENST00000546839 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.29■□□□□ 0.841e-8■□□□□ 11.3
ERGIC2-203ENST00000546839 EIF4G3O43432 1585 aaKnown RBP20.28■□□□□ 0.84
ERGIC2-203ENST00000546839 TOP2BQ02880 1626 aa20.27■□□□□ 0.84
ERGIC2-203ENST00000546839 ABCA10Q8WWZ4 1543 aa20.27■□□□□ 0.83
ERGIC2-203ENST00000546839 SYNJ1O43426 1573 aa20.26■□□□□ 0.83
ERGIC2-203ENST00000546839 FOXD4L1Q9NU39 408 aa20.25■□□□□ 0.83
ERGIC2-203ENST00000546839 FBLN2P98095 1184 aa20.24■□□□□ 0.83
ERGIC2-203ENST00000546839 BIVM-ERCC5R4GMW8 1640 aa20.23■□□□□ 0.83
ERGIC2-203ENST00000546839 ZBTB22O15209 634 aa20.22■□□□□ 0.83
ERGIC2-203ENST00000546839 GAPVD1Q14C86 1478 aa20.22■□□□□ 0.83
ERGIC2-203ENST00000546839 GRIN2BQ13224 1484 aa20.2■□□□□ 0.82
ERGIC2-203ENST00000546839 CHMP7Q8WUX9 453 aaPredicted RBP20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms