RNA–Protein interactions for RNA: ENST00000544810.5

CNGA1-209, Transcript of cyclic nucleotide gated channel alpha 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CNGA1, Length 2,722 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1-209ENST00000544810 CHIC1Q5VXU3 224 aa11.41□□□□□ -0.58
CNGA1-209ENST00000544810 AEBP2Q6ZN18 517 aaPredicted RBP11.23□□□□□ -0.61
CNGA1-209ENST00000544810 NISCHQ9Y2I1 1504 aa10.6□□□□□ -0.71
CNGA1-209ENST00000544810 PHF23Q9BUL5 403 aaPredicted RBP10.22□□□□□ -0.77
CNGA1-209ENST00000544810 ABCC9O60706 1549 aa10.05□□□□□ -0.8
CNGA1-209ENST00000544810 SENP3Q9H4L4 574 aaPredicted RBP10□□□□□ -0.81
CNGA1-209ENST00000544810 DNAJC5BQ9UF47 199 aa9.78□□□□□ -0.84
CNGA1-209ENST00000544810 CCDC180Q9P1Z9 1646 aa9.67□□□□□ -0.86
CNGA1-209ENST00000544810 PLPPR3Q6T4P5 718 aa9.51□□□□□ -0.89
CNGA1-209ENST00000544810 RB1CC1Q8TDY2 1594 aa9.4□□□□□ -0.91
CNGA1-209ENST00000544810 EHMT2Q96KQ7 1210 aa9.37□□□□□ -0.91
CNGA1-209ENST00000544810 PABPN1Q86U42 306 aaKnown RBP eCLIP9.29□□□□□ -0.92
CNGA1-209ENST00000544810 DNAJC5Q9H3Z4 198 aa9.27□□□□□ -0.92
CNGA1-209ENST00000544810 NACADO15069 1562 aa9.24□□□□□ -0.93
CNGA1-209ENST00000544810 BICRAQ9NZM4 1560 aa9.15□□□□□ -0.95
CNGA1-209ENST00000544810 KCNA4P22459 653 aa9.13□□□□□ -0.95
CNGA1-209ENST00000544810 UNC13AQ9UPW8 1703 aa9.12□□□□□ -0.95
CNGA1-209ENST00000544810 ADRA2BP18089 450 aa9.12□□□□□ -0.95
CNGA1-209ENST00000544810 CECR2Q9BXF3 1484 aa9.1□□□□□ -0.95
CNGA1-209ENST00000544810 FOXD1Q16676 465 aa9.09□□□□□ -0.95
CNGA1-209ENST00000544810 DCAF8L2P0C7V8 631 aa9.05□□□□□ -0.96
CNGA1-209ENST00000544810 CC2D2AQ9P2K1 1620 aa9.05□□□□□ -0.96
CNGA1-209ENST00000544810 SHROOM4Q9ULL8 1493 aa9.01□□□□□ -0.97
CNGA1-209ENST00000544810 MYO15BQ96JP2 1530 aa9.01□□□□□ -0.97
CNGA1-209ENST00000544810 MSH5O43196 834 aa8.96□□□□□ -0.98
CNGA1-209ENST00000544810 EIF4G1Q04637 1599 aaKnown RBP8.95□□□□□ -0.98
CNGA1-209ENST00000544810 PPP6R1Q9UPN7 881 aa8.89□□□□□ -0.99
CNGA1-209ENST00000544810 POTEDQ86YR6 584 aa8.88□□□□□ -0.99
CNGA1-209ENST00000544810 CUX2O14529 1486 aa8.85□□□□□ -0.99
CNGA1-209ENST00000544810 CSRNP3Q8WYN3 585 aa8.83□□□□□ -1
CNGA1-209ENST00000544810 SCRIBQ14160 1630 aa8.78□□□□□ -1
CNGA1-209ENST00000544810 DCAF1Q9Y4B6 1507 aa8.74□□□□□ -1.01
CNGA1-209ENST00000544810 SLC4A1APQ9BWU0 796 aaKnown RBP8.72□□□□□ -1.01
CNGA1-209ENST00000544810 ZCCHC6Q5VYS8 1495 aaKnown RBP8.71□□□□□ -1.01
CNGA1-209ENST00000544810 ERCC6Q03468 1493 aa8.7□□□□□ -1.02
CNGA1-209ENST00000544810 TRIM41Q8WV44 630 aa8.68□□□□□ -1.02
CNGA1-209ENST00000544810 NCAPD3P42695 1498 aa8.55□□□□□ -1.04
CNGA1-209ENST00000544810 THOC2Q8NI27 1593 aaKnown RBP8.53□□□□□ -1.04
CNGA1-209ENST00000544810 NESP48681 1621 aa8.52□□□□□ -1.04
CNGA1-209ENST00000544810 PPP4R3CPQ6ZMV5 832 aa8.52□□□□□ -1.05
CNGA1-209ENST00000544810 SLC24A1O60721 1099 aa8.5□□□□□ -1.05
CNGA1-209ENST00000544810 ATAD2BQ9ULI0 1458 aa8.47□□□□□ -1.05
CNGA1-209ENST00000544810 HMGXB3Q12766 1538 aa8.45□□□□□ -1.06
CNGA1-209ENST00000544810 ZBTB22O15209 634 aa8.45□□□□□ -1.06
CNGA1-209ENST00000544810 SMARCA2P51531 1590 aa8.44□□□□□ -1.06
CNGA1-209ENST00000544810 PIAS4Q8N2W9 510 aaPredicted RBP8.43□□□□□ -1.06
CNGA1-209ENST00000544810 RTN4Q9NQC3 1192 aaKnown RBP8.41□□□□□ -1.06
CNGA1-209ENST00000544810 LAMC3Q9Y6N6 1575 aa8.4□□□□□ -1.06
CNGA1-209ENST00000544810 NPM3O75607 178 aaKnown RBP8.38□□□□□ -1.07
CNGA1-209ENST00000544810 BAZ1AQ9NRL2 1556 aaPredicted RBP8.37□□□□□ -1.07
CNGA1-209ENST00000544810 PDS5BQ9NTI5 1447 aa8.37□□□□□ -1.07
CNGA1-209ENST00000544810 KIF21AQ7Z4S6 1674 aa8.37□□□□□ -1.07
CNGA1-209ENST00000544810 NCBP3Q53F19 620 aaKnown RBP8.35□□□□□ -1.07
CNGA1-209ENST00000544810 BAZ1BQ9UIG0 1483 aaKnown RBP8.35□□□□□ -1.07
CNGA1-209ENST00000544810 OSCARQ8IYS5 282 aa8.34□□□□□ -1.07
CNGA1-209ENST00000544810 SMARCA4P51532 1647 aa8.34□□□□□ -1.07
CNGA1-209ENST00000544810 MRC2Q9UBG0 1479 aa8.34□□□□□ -1.08
CNGA1-209ENST00000544810 WDR62O43379 1518 aa8.33□□□□□ -1.08
CNGA1-209ENST00000544810 RIMBP3CA6NJZ7 1639 aa8.29□□□□□ -1.08
CNGA1-209ENST00000544810 RIMBP3BA6NNM3 1639 aa8.29□□□□□ -1.08
CNGA1-209ENST00000544810 RIMBP3Q9UFD9 1639 aa8.29□□□□□ -1.08
CNGA1-209ENST00000544810 PEG3Q9GZU2 1588 aa8.28□□□□□ -1.08
CNGA1-209ENST00000544810 CADPSQ9ULU8 1353 aa8.26□□□□□ -1.09
CNGA1-209ENST00000544810 ARHGEF11O15085 1522 aa8.23□□□□□ -1.09
CNGA1-209ENST00000544810 CEP164Q9UPV0 1460 aa8.21□□□□□ -1.09
CNGA1-209ENST00000544810 TRHP20396 242 aaPredicted RBP8.2□□□□□ -1.1
CNGA1-209ENST00000544810 AMER1Q5JTC6 1135 aaPredicted RBP8.19□□□□□ -1.1
CNGA1-209ENST00000544810 FANCD2Q9BXW9 1451 aa8.17□□□□□ -1.1
CNGA1-209ENST00000544810 CYB5RLQ6IPT4 315 aa8.16□□□□□ -1.1
CNGA1-209ENST00000544810 MROH2BQ7Z745 1585 aa8.16□□□□□ -1.1
CNGA1-209ENST00000544810 ARAP1Q96P48 1450 aa8.14□□□□□ -1.11
CNGA1-209ENST00000544810 URB2Q14146 1524 aaKnown RBP8.14□□□□□ -1.11
CNGA1-209ENST00000544810 ZNF608Q9ULD9 1512 aaPredicted RBP8.09□□□□□ -1.11
CNGA1-209ENST00000544810 CFTRP13569 1480 aa8.09□□□□□ -1.11
CNGA1-209ENST00000544810 FOXD4L1Q9NU39 408 aa8.08□□□□□ -1.12
CNGA1-209ENST00000544810 IFT140Q96RY7 1462 aa8.07□□□□□ -1.12
CNGA1-209ENST00000544810 RSF1Q96T23 1441 aaPredicted RBP8.07□□□□□ -1.12
CNGA1-209ENST00000544810 CNKSR2Q8WXI2 1034 aa8.07□□□□□ -1.12
CNGA1-209ENST00000544810 EIF4G3O43432 1585 aaKnown RBP8.02□□□□□ -1.13
CNGA1-209ENST00000544810 WIZO95785 1651 aa8.01□□□□□ -1.13
CNGA1-209ENST00000544810 CHD1O14646 1710 aa8□□□□□ -1.13
CNGA1-209ENST00000544810 FKBP8Q14318 412 aa7.98□□□□□ -1.13
CNGA1-209ENST00000544810 ILDR1Q86SU0 546 aaPredicted RBP7.98□□□□□ -1.13
CNGA1-209ENST00000544810 TOPBP1Q92547 1522 aa7.97□□□□□ -1.13
CNGA1-209ENST00000544810 AQRO60306 1485 aaKnown RBP eCLIP7.96□□□□□ -1.14
CNGA1-209ENST00000544810 FBLN2P98095 1184 aa7.95□□□□□ -1.14
CNGA1-209ENST00000544810 CLASP1Q7Z460 1538 aa7.95□□□□□ -1.14
CNGA1-209ENST00000544810 MAPK8IP2Q13387 824 aaPredicted RBP7.94□□□□□ -1.14
CNGA1-209ENST00000544810 TARBP1Q13395 1621 aaKnown RBP7.92□□□□□ -1.14
CNGA1-209ENST00000544810 TOP2AP11388 1531 aaKnown RBP7.92□□□□□ -1.14
CNGA1-209ENST00000544810 ABCC8Q09428 1581 aa7.92□□□□□ -1.14
CNGA1-209ENST00000544810 SCAF1Q9H7N4 1312 aaKnown RBP7.92□□□□□ -1.14
CNGA1-209ENST00000544810 PRDM2Q13029 1718 aa7.91□□□□□ -1.14
CNGA1-209ENST00000544810 DNMBPQ6XZF7 1577 aa7.9□□□□□ -1.14
CNGA1-209ENST00000544810 SYNJ1O43426 1573 aa7.89□□□□□ -1.15
CNGA1-209ENST00000544810 GAPVD1Q14C86 1478 aa7.89□□□□□ -1.15
CNGA1-209ENST00000544810 SNAPC4Q5SXM2 1469 aa7.88□□□□□ -1.15
CNGA1-209ENST00000544810 POLA1P09884 1462 aaPredicted RBP7.86□□□□□ -1.15
CNGA1-209ENST00000544810 DMRT2Q9Y5R5 561 aa7.86□□□□□ -1.15
CNGA1-209ENST00000544810 TDRD9Q8NDG6 1382 aaKnown RBP7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms