RNA–Protein interactions for RNA: ENST00000544455.5

BRCA2-206, Transcript of BRCA2, DNA repair associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRCA2, Length 10,984 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-206ENST00000544455 NISCHQ9Y2I1 1504 aa7.83□□□□□ -1.16
BRCA2-206ENST00000544455 SHROOM4Q9ULL8 1493 aa6.93□□□□□ -1.3
BRCA2-206ENST00000544455 DCAF8L2P0C7V8 631 aa6.84□□□□□ -1.31
BRCA2-206ENST00000544455 SUPT5HO00267 1087 aaKnown RBP6.75□□□□□ -1.33
BRCA2-206ENST00000544455 ZCCHC6Q5VYS8 1495 aaKnown RBP6.6□□□□□ -1.35
BRCA2-206ENST00000544455 CCDC180Q9P1Z9 1646 aa6.51□□□□□ -1.37
BRCA2-206ENST00000544455 ABCC9O60706 1549 aa6.41□□□□□ -1.38
BRCA2-206ENST00000544455 CHIC1Q5VXU3 224 aa6.4□□□□□ -1.38
BRCA2-206ENST00000544455 MYO15BQ96JP2 1530 aa6.38□□□□□ -1.39
BRCA2-206ENST00000544455 EHMT2Q96KQ7 1210 aa6.36□□□□□ -1.39
BRCA2-206ENST00000544455 SCRIBQ14160 1630 aa6.33□□□□□ -1.4
BRCA2-206ENST00000544455 LOC105371045A0A1W2PR82 267 aa6.33□□□□□ -1.4
BRCA2-206ENST00000544455 FAM9AQ8IZU1 332 aaPredicted RBP6.28□□□□□ -1.4
BRCA2-206ENST00000544455 DCAF1Q9Y4B6 1507 aa6.28□□□□□ -1.4
BRCA2-206ENST00000544455 RSF1Q96T23 1441 aaPredicted RBP6.24□□□□□ -1.41
BRCA2-206ENST00000544455 CECR2Q9BXF3 1484 aa6.24□□□□□ -1.41
BRCA2-206ENST00000544455 PCGF6Q9BYE7 350 aa6.23□□□□□ -1.41
BRCA2-206ENST00000544455 PABPN1Q86U42 306 aaKnown RBP eCLIP6.2□□□□□ -1.42
BRCA2-206ENST00000544455 TRIM41Q8WV44 630 aa6.2□□□□□ -1.42
BRCA2-206ENST00000544455 MROH2BQ7Z745 1585 aa6.16□□□□□ -1.42
BRCA2-206ENST00000544455 PPARGC1BQ86YN6 1023 aaKnown RBP6.15□□□□□ -1.42
BRCA2-206ENST00000544455 RB1CC1Q8TDY2 1594 aa6.15□□□□□ -1.42
BRCA2-206ENST00000544455 NACADO15069 1562 aa6.11□□□□□ -1.43
BRCA2-206ENST00000544455 TTBK1Q5TCY1 1321 aaPredicted RBP6.1□□□□□ -1.43
BRCA2-206ENST00000544455 WIZO95785 1651 aa6.08□□□□□ -1.44
BRCA2-206ENST00000544455 HRCP23327 699 aa6.07□□□□□ -1.44
BRCA2-206ENST00000544455 RANGAP1P46060 587 aaPredicted RBP6.01□□□□□ -1.45
BRCA2-206ENST00000544455 TRIM26Q12899 539 aaPredicted RBP6.01□□□□□ -1.45
BRCA2-206ENST00000544455 ABCC8Q09428 1581 aa6.01□□□□□ -1.45
BRCA2-206ENST00000544455 CCDC88BA6NC98 1476 aa5.99□□□□□ -1.45
BRCA2-206ENST00000544455 BAZ1AQ9NRL2 1556 aaPredicted RBP5.98□□□□□ -1.45
BRCA2-206ENST00000544455 SOGA1O94964 1423 aa5.97□□□□□ -1.45
BRCA2-206ENST00000544455 RUSC2Q8N2Y8 1516 aa5.95□□□□□ -1.46
BRCA2-206ENST00000544455 SMARCA4P51532 1647 aa5.95□□□□□ -1.46
BRCA2-206ENST00000544455 UBTFP17480 764 aaKnown RBP5.94□□□□□ -1.46
BRCA2-206ENST00000544455 BICRAQ9NZM4 1560 aa5.93□□□□□ -1.46
BRCA2-206ENST00000544455 TOP2AP11388 1531 aaKnown RBP5.93□□□□□ -1.46
BRCA2-206ENST00000544455 SMARCA2P51531 1590 aa5.92□□□□□ -1.46
BRCA2-206ENST00000544455 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP5.92□□□□□ -1.46
BRCA2-206ENST00000544455 EIF4G1Q04637 1599 aaKnown RBP5.88□□□□□ -1.47
BRCA2-206ENST00000544455 CSRNP3Q8WYN3 585 aa5.88□□□□□ -1.47
BRCA2-206ENST00000544455 ATAD2BQ9ULI0 1458 aa5.87□□□□□ -1.47
BRCA2-206ENST00000544455 UNC13AQ9UPW8 1703 aa5.87□□□□□ -1.47
BRCA2-206ENST00000544455 BAZ1BQ9UIG0 1483 aaKnown RBP5.86□□□□□ -1.47
BRCA2-206ENST00000544455 WRNQ14191 1432 aaPredicted RBP eCLIP5.86□□□□□ -1.47
BRCA2-206ENST00000544455 CEP162Q5TB80 1403 aa5.85□□□□□ -1.47
BRCA2-206ENST00000544455 CCER1Q8TC90 406 aaPredicted RBP5.85□□□□□ -1.47
BRCA2-206ENST00000544455 HNRNPUL2Q1KMD3 747 aaKnown RBP5.82□□□□□ -1.48
BRCA2-206ENST00000544455 SYNJ1O43426 1573 aa5.81□□□□□ -1.48
BRCA2-206ENST00000544455 TNIKQ9UKE5 1360 aa5.79□□□□□ -1.48
BRCA2-206ENST00000544455 GOLGA3Q08378 1498 aa5.77□□□□□ -1.49
BRCA2-206ENST00000544455 RAPGEF2Q9Y4G8 1499 aa5.77□□□□□ -1.49
BRCA2-206ENST00000544455 DNAJC5BQ9UF47 199 aa5.76□□□□□ -1.49
BRCA2-206ENST00000544455 ZEB1P37275 1124 aaPredicted RBP5.75□□□□□ -1.49
BRCA2-206ENST00000544455 CLIP1P30622 1438 aa5.75□□□□□ -1.49
BRCA2-206ENST00000544455 PEG3Q9GZU2 1588 aa5.75□□□□□ -1.49
BRCA2-206ENST00000544455 P3H3Q8IVL6 736 aa5.75□□□□□ -1.49
BRCA2-206ENST00000544455 ITGAEP38570 1179 aa5.74□□□□□ -1.49
BRCA2-206ENST00000544455 APLP2Q06481 763 aa5.74□□□□□ -1.49
BRCA2-206ENST00000544455 ATP1B4Q9UN42 357 aaPredicted RBP5.74□□□□□ -1.49
BRCA2-206ENST00000544455 CEP164Q9UPV0 1460 aa5.73□□□□□ -1.49
BRCA2-206ENST00000544455 KANK4Q5T7N3 995 aaPredicted RBP5.73□□□□□ -1.49
BRCA2-206ENST00000544455 NCAPD3P42695 1498 aa5.72□□□□□ -1.49
BRCA2-206ENST00000544455 EEA1Q15075 1411 aa5.72□□□□□ -1.49
BRCA2-206ENST00000544455 CUX1P39880 1505 aa5.71□□□□□ -1.5
BRCA2-206ENST00000544455 NESP48681 1621 aa5.69□□□□□ -1.5
BRCA2-206ENST00000544455 KIF21BO75037 1637 aa5.68□□□□□ -1.5
BRCA2-206ENST00000544455 CUX2O14529 1486 aa5.67□□□□□ -1.5
BRCA2-206ENST00000544455 CFTRP13569 1480 aa5.67□□□□□ -1.5
BRCA2-206ENST00000544455 YTHDC1Q96MU7 727 aaKnown RBP5.67□□□□□ -1.5
BRCA2-206ENST00000544455 CADPSQ9ULU8 1353 aa5.67□□□□□ -1.5
BRCA2-206ENST00000544455 VPS8Q8N3P4 1428 aa5.67□□□□□ -1.5
BRCA2-206ENST00000544455 TOP2BQ02880 1626 aa5.67□□□□□ -1.5
BRCA2-206ENST00000544455 HMGXB3Q12766 1538 aa5.66□□□□□ -1.5
BRCA2-206ENST00000544455 DIEXFQ68CQ4 756 aaKnown RBP5.66□□□□□ -1.5
BRCA2-206ENST00000544455 RAD54L2Q9Y4B4 1467 aa5.66□□□□□ -1.5
BRCA2-206ENST00000544455 KIF27Q86VH2 1401 aa5.65□□□□□ -1.5
BRCA2-206ENST00000544455 ARAP1Q96P48 1450 aa5.65□□□□□ -1.5
BRCA2-206ENST00000544455 ARID3CA6NKF2 412 aa5.65□□□□□ -1.51
BRCA2-206ENST00000544455 IGF1RP08069 1367 aa5.65□□□□□ -1.51
BRCA2-206ENST00000544455 CC2D2AQ9P2K1 1620 aa5.65□□□□□ -1.51
BRCA2-206ENST00000544455 PRXQ9BXM0 1461 aa5.65□□□□□ -1.51
BRCA2-206ENST00000544455 FGD5Q6ZNL6 1462 aa5.64□□□□□ -1.51
BRCA2-206ENST00000544455 CARMIL1Q5VZK9 1371 aa5.63□□□□□ -1.51
BRCA2-206ENST00000544455 SCAF1Q9H7N4 1312 aaKnown RBP5.63□□□□□ -1.51
BRCA2-206ENST00000544455 FANCD2Q9BXW9 1451 aa5.62□□□□□ -1.51
BRCA2-206ENST00000544455 TDRD9Q8NDG6 1382 aaKnown RBP5.62□□□□□ -1.51
BRCA2-206ENST00000544455 FAM50AQ14320 339 aaKnown RBP5.62□□□□□ -1.51
BRCA2-206ENST00000544455 ARHGAP35Q9NRY4 1499 aa5.61□□□□□ -1.51
BRCA2-206ENST00000544455 BIVM-ERCC5R4GMW8 1640 aa5.61□□□□□ -1.51
BRCA2-206ENST00000544455 NEUROD1Q13562 356 aa5.61□□□□□ -1.51
BRCA2-206ENST00000544455 FHOD3Q2V2M9 1422 aa5.6□□□□□ -1.51
BRCA2-206ENST00000544455 ZNF316A6NFI3 1004 aaPredicted RBP5.59□□□□□ -1.51
BRCA2-206ENST00000544455 MIER1Q8N108 512 aa5.58□□□□□ -1.52
BRCA2-206ENST00000544455 POLA1P09884 1462 aaPredicted RBP5.57□□□□□ -1.52
BRCA2-206ENST00000544455 HIRIP3Q9BW71 556 aaPredicted RBP5.57□□□□□ -1.52
BRCA2-206ENST00000544455 ERICH3Q5RHP9 1530 aa5.56□□□□□ -1.52
BRCA2-206ENST00000544455 SIN3AQ96ST3 1273 aa5.56□□□□□ -1.52
BRCA2-206ENST00000544455 DHX57Q6P158 1386 aaKnown RBP5.56□□□□□ -1.52
BRCA2-206ENST00000544455 TOPBP1Q92547 1522 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms