RNA–Protein interactions for RNA: ENST00000542832.1

DDX47-208, Transcript of DEAD-box helicase 47, humanhuman

TSL 5

Gene DDX47, Length 554 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX47-208ENST00000542832 AEBP2Q6ZN18 517 aaPredicted RBP25.3■■□□□ 1.64
DDX47-208ENST00000542832 CHIC1Q5VXU3 224 aa23.99■■□□□ 1.43
DDX47-208ENST00000542832 SENP3Q9H4L4 574 aaPredicted RBP21.57■■□□□ 1.04
DDX47-208ENST00000542832 PHF23Q9BUL5 403 aaPredicted RBP21.29■■□□□ 1
DDX47-208ENST00000542832 NISCHQ9Y2I1 1504 aa20.34■□□□□ 0.85
DDX47-208ENST00000542832 FOXD1Q16676 465 aa20.11■□□□□ 0.81
DDX47-208ENST00000542832 PLPPR3Q6T4P5 718 aa19.14■□□□□ 0.65
DDX47-208ENST00000542832 MSH5O43196 834 aa18.85■□□□□ 0.61
DDX47-208ENST00000542832 PPP6R1Q9UPN7 881 aa18.78■□□□□ 0.6
DDX47-208ENST00000542832 PIAS4Q8N2W9 510 aaPredicted RBP18.77■□□□□ 0.6
DDX47-208ENST00000542832 ADRA2BP18089 450 aa18.7■□□□□ 0.58
DDX47-208ENST00000542832 POTEDQ86YR6 584 aa18.46■□□□□ 0.55
DDX47-208ENST00000542832 CCDC180Q9P1Z9 1646 aa17.84■□□□□ 0.45
DDX47-208ENST00000542832 MAPK8IP2Q13387 824 aaPredicted RBP17.2■□□□□ 0.34
DDX47-208ENST00000542832 SCAF1Q9H7N4 1312 aaKnown RBP17.13■□□□□ 0.33
DDX47-208ENST00000542832 DMRT2Q9Y5R5 561 aa17.11■□□□□ 0.33
DDX47-208ENST00000542832 ZCCHC6Q5VYS8 1495 aaKnown RBP17.01■□□□□ 0.31
DDX47-208ENST00000542832 DCAF1Q9Y4B6 1507 aa16.97■□□□□ 0.31
DDX47-208ENST00000542832 ABCC9O60706 1549 aa16.92■□□□□ 0.3
DDX47-208ENST00000542832 MYO15BQ96JP2 1530 aa16.92■□□□□ 0.3
DDX47-208ENST00000542832 DCAF8L2P0C7V8 631 aa16.78■□□□□ 0.28
DDX47-208ENST00000542832 PPP4R3CPQ6ZMV5 832 aa16.77■□□□□ 0.28
DDX47-208ENST00000542832 NACADO15069 1562 aa16.76■□□□□ 0.27
DDX47-208ENST00000542832 RB1CC1Q8TDY2 1594 aa16.6■□□□□ 0.25
DDX47-208ENST00000542832 HOXD11P31277 338 aaPredicted RBP16.48■□□□□ 0.23
DDX47-208ENST00000542832 CNKSR2Q8WXI2 1034 aa16.47■□□□□ 0.23
DDX47-208ENST00000542832 DCAF8L1A6NGE4 600 aa16.36■□□□□ 0.21
DDX47-208ENST00000542832 RNF216Q9NWF9 866 aaPredicted RBP16.34■□□□□ 0.21
DDX47-208ENST00000542832 CACNB1Q02641 598 aaPredicted RBP16.18■□□□□ 0.18
DDX47-208ENST00000542832 SHROOM4Q9ULL8 1493 aa16.16■□□□□ 0.18
DDX47-208ENST00000542832 SCRIBQ14160 1630 aa16.16■□□□□ 0.18
DDX47-208ENST00000542832 NCBP3Q53F19 620 aaKnown RBP16.11■□□□□ 0.17
DDX47-208ENST00000542832 RNF39Q9H2S5 420 aa16.08■□□□□ 0.16
DDX47-208ENST00000542832 UNC13AQ9UPW8 1703 aa16.02■□□□□ 0.16
DDX47-208ENST00000542832 BICRAQ9NZM4 1560 aa16■□□□□ 0.15
DDX47-208ENST00000542832 PABPN1Q86U42 306 aaKnown RBP eCLIP15.94■□□□□ 0.14
DDX47-208ENST00000542832 DNAJC5BQ9UF47 199 aa15.94■□□□□ 0.14
DDX47-208ENST00000542832 NPM3O75607 178 aaKnown RBP15.88■□□□□ 0.13
DDX47-208ENST00000542832 C1QBPQ07021 282 aaKnown RBP15.84■□□□□ 0.13
DDX47-208ENST00000542832 BAZ1AQ9NRL2 1556 aaPredicted RBP15.75■□□□□ 0.11
DDX47-208ENST00000542832 CECR2Q9BXF3 1484 aa15.71■□□□□ 0.1
DDX47-208ENST00000542832 RSF1Q96T23 1441 aaPredicted RBP15.68■□□□□ 0.1
DDX47-208ENST00000542832 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.66■□□□□ 0.1
DDX47-208ENST00000542832 SMARCA4P51532 1647 aa15.61■□□□□ 0.09
DDX47-208ENST00000542832 MROH2BQ7Z745 1585 aa15.6■□□□□ 0.09
DDX47-208ENST00000542832 SUPT5HO00267 1087 aaKnown RBP15.58■□□□□ 0.08
DDX47-208ENST00000542832 EIF4G1Q04637 1599 aaKnown RBP15.57■□□□□ 0.08
DDX47-208ENST00000542832 PEG3Q9GZU2 1588 aa15.57■□□□□ 0.08
DDX47-208ENST00000542832 KCNA4P22459 653 aa15.53■□□□□ 0.08
DDX47-208ENST00000542832 SMARCA2P51531 1590 aa15.52■□□□□ 0.07
DDX47-208ENST00000542832 NCAPD3P42695 1498 aa15.5■□□□□ 0.07
DDX47-208ENST00000542832 ATAD2BQ9ULI0 1458 aa15.49■□□□□ 0.07
DDX47-208ENST00000542832 WIZO95785 1651 aa15.39■□□□□ 0.05
DDX47-208ENST00000542832 HMGXB3Q12766 1538 aa15.38■□□□□ 0.05
DDX47-208ENST00000542832 BAZ1BQ9UIG0 1483 aaKnown RBP15.36■□□□□ 0.05
DDX47-208ENST00000542832 TOP2AP11388 1531 aaKnown RBP15.36■□□□□ 0.05
DDX47-208ENST00000542832 U3KPZ7 1027 aaPredicted RBP15.35■□□□□ 0.05
DDX47-208ENST00000542832 CC2D2AQ9P2K1 1620 aa15.35■□□□□ 0.05
DDX47-208ENST00000542832 CCDC88BA6NC98 1476 aa15.2■□□□□ 0.02
DDX47-208ENST00000542832 SLC4A2P04920 1241 aa15.18■□□□□ 0.02
DDX47-208ENST00000542832 SPINK5Q9NQ38 1064 aaPredicted RBP15.13■□□□□ 0.01
DDX47-208ENST00000542832 CAPN15O75808 1086 aa15.09■□□□□ 0.01
DDX47-208ENST00000542832 CADPSQ9ULU8 1353 aa15.06■□□□□ 0
DDX47-208ENST00000542832 CFTRP13569 1480 aa15.04■□□□□ -0
DDX47-208ENST00000542832 DSG3P32926 999 aa15.04■□□□□ -0
DDX47-208ENST00000542832 LAMC3Q9Y6N6 1575 aa14.94□□□□□ -0.02
DDX47-208ENST00000542832 APLP2Q06481 763 aa14.92□□□□□ -0.02
DDX47-208ENST00000542832 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.9□□□□□ -0.02
DDX47-208ENST00000542832 HNRNPUL2Q1KMD3 747 aaKnown RBP14.9□□□□□ -0.02
DDX47-208ENST00000542832 PDS5BQ9NTI5 1447 aa14.9□□□□□ -0.02
DDX47-208ENST00000542832 TRHP20396 242 aaPredicted RBP14.84□□□□□ -0.03
DDX47-208ENST00000542832 ZNF219Q9P2Y4 722 aaPredicted RBP14.84□□□□□ -0.03
DDX47-208ENST00000542832 SAMD1Q6SPF0 538 aaPredicted RBP14.81□□□□□ -0.04
DDX47-208ENST00000542832 TRIM41Q8WV44 630 aa14.81□□□□□ -0.04
DDX47-208ENST00000542832 ABCC8Q09428 1581 aa14.79□□□□□ -0.04
DDX47-208ENST00000542832 FANCD2Q9BXW9 1451 aa14.79□□□□□ -0.04
DDX47-208ENST00000542832 PRDM2Q13029 1718 aa14.78□□□□□ -0.04
DDX47-208ENST00000542832 WRNQ14191 1432 aaPredicted RBP eCLIP14.78□□□□□ -0.04
DDX47-208ENST00000542832 NESP48681 1621 aa14.76□□□□□ -0.05
DDX47-208ENST00000542832 ABCB7O75027 752 aa14.74□□□□□ -0.05
DDX47-208ENST00000542832 CEP164Q9UPV0 1460 aa14.72□□□□□ -0.05
DDX47-208ENST00000542832 MYCNP04198 464 aaPredicted RBP14.69□□□□□ -0.06
DDX47-208ENST00000542832 SLC4A1APQ9BWU0 796 aaKnown RBP14.65□□□□□ -0.06
DDX47-208ENST00000542832 TOP2BQ02880 1626 aa14.65□□□□□ -0.06
DDX47-208ENST00000542832 BIVM-ERCC5R4GMW8 1640 aa14.61□□□□□ -0.07
DDX47-208ENST00000542832 ERCC6Q03468 1493 aa14.61□□□□□ -0.07
DDX47-208ENST00000542832 MRC2Q9UBG0 1479 aa14.61□□□□□ -0.07
DDX47-208ENST00000542832 CUX1P39880 1505 aa14.61□□□□□ -0.07
DDX47-208ENST00000542832 DNMBPQ6XZF7 1577 aa14.6□□□□□ -0.07
DDX47-208ENST00000542832 EEA1Q15075 1411 aa14.59□□□□□ -0.07
DDX47-208ENST00000542832 TOPBP1Q92547 1522 aa14.59□□□□□ -0.07
DDX47-208ENST00000542832 SYNJ1O43426 1573 aa14.57□□□□□ -0.08
DDX47-208ENST00000542832 URB2Q14146 1524 aaKnown RBP14.56□□□□□ -0.08
DDX47-208ENST00000542832 KIF21AQ7Z4S6 1674 aa14.54□□□□□ -0.08
DDX47-208ENST00000542832 WDR62O43379 1518 aa14.53□□□□□ -0.08
DDX47-208ENST00000542832 SOGA1O94964 1423 aa14.52□□□□□ -0.08
DDX47-208ENST00000542832 FOXD4L1Q9NU39 408 aa14.52□□□□□ -0.09
DDX47-208ENST00000542832 FGD5Q6ZNL6 1462 aa14.5□□□□□ -0.09
DDX47-208ENST00000542832 POLA1P09884 1462 aaPredicted RBP14.5□□□□□ -0.09
DDX47-208ENST00000542832 KIF27Q86VH2 1401 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms