RNA–Protein interactions for RNA: ENST00000542236.5

BBS12-203, Transcript of Bardet-Biedl syndrome 12, humanhuman

APPRIS P1 TSL 2 BASIC

Gene BBS12, Length 3,431 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS12-203ENST00000542236 NISCHQ9Y2I1 1504 aa17.66■□□□□ 0.42
BBS12-203ENST00000542236 CCDC180Q9P1Z9 1646 aa15.49■□□□□ 0.07
BBS12-203ENST00000542236 ZCCHC6Q5VYS8 1495 aaKnown RBP14.93□□□□□ -0.02
BBS12-203ENST00000542236 DCAF1Q9Y4B6 1507 aa14.81□□□□□ -0.04
BBS12-203ENST00000542236 MYO15BQ96JP2 1530 aa14.6□□□□□ -0.07
BBS12-203ENST00000542236 NACADO15069 1562 aa14.28□□□□□ -0.12
BBS12-203ENST00000542236 PPARGC1BQ86YN6 1023 aaKnown RBP14.26□□□□□ -0.13
BBS12-203ENST00000542236 HRCP23327 699 aa14.21□□□□□ -0.14
BBS12-203ENST00000542236 SHROOM4Q9ULL8 1493 aa14.09□□□□□ -0.15
BBS12-203ENST00000542236 RB1CC1Q8TDY2 1594 aa14.05□□□□□ -0.16
BBS12-203ENST00000542236 PCGF6Q9BYE7 350 aa14.04□□□□□ -0.16
BBS12-203ENST00000542236 ABCC9O60706 1549 aa14.03□□□□□ -0.16
BBS12-203ENST00000542236 SUPT5HO00267 1087 aaKnown RBP13.96□□□□□ -0.17
BBS12-203ENST00000542236 SCRIBQ14160 1630 aa13.96□□□□□ -0.17
BBS12-203ENST00000542236 DCAF8L2P0C7V8 631 aa13.93□□□□□ -0.18
BBS12-203ENST00000542236 UNC13AQ9UPW8 1703 aa13.82□□□□□ -0.2
BBS12-203ENST00000542236 RSF1Q96T23 1441 aaPredicted RBP13.71□□□□□ -0.22
BBS12-203ENST00000542236 SCAF1Q9H7N4 1312 aaKnown RBP13.69□□□□□ -0.22
BBS12-203ENST00000542236 BAZ1AQ9NRL2 1556 aaPredicted RBP13.64□□□□□ -0.23
BBS12-203ENST00000542236 BICRAQ9NZM4 1560 aa13.63□□□□□ -0.23
BBS12-203ENST00000542236 CHIC1Q5VXU3 224 aa13.61□□□□□ -0.23
BBS12-203ENST00000542236 PELP1Q8IZL8 1130 aaKnown RBP13.61□□□□□ -0.23
BBS12-203ENST00000542236 MROH2BQ7Z745 1585 aa13.56□□□□□ -0.24
BBS12-203ENST00000542236 CECR2Q9BXF3 1484 aa13.55□□□□□ -0.24
BBS12-203ENST00000542236 LOC105371045A0A1W2PR82 267 aa13.55□□□□□ -0.24
BBS12-203ENST00000542236 SMARCA4P51532 1647 aa13.54□□□□□ -0.24
BBS12-203ENST00000542236 PEG3Q9GZU2 1588 aa13.53□□□□□ -0.24
BBS12-203ENST00000542236 WIZO95785 1651 aa13.47□□□□□ -0.25
BBS12-203ENST00000542236 TOP2AP11388 1531 aaKnown RBP13.45□□□□□ -0.26
BBS12-203ENST00000542236 EIF4G1Q04637 1599 aaKnown RBP13.41□□□□□ -0.26
BBS12-203ENST00000542236 SMARCA2P51531 1590 aa13.3□□□□□ -0.28
BBS12-203ENST00000542236 TRIM26Q12899 539 aaPredicted RBP13.29□□□□□ -0.28
BBS12-203ENST00000542236 NEUROD1Q13562 356 aa13.26□□□□□ -0.29
BBS12-203ENST00000542236 ATAD2BQ9ULI0 1458 aa13.21□□□□□ -0.3
BBS12-203ENST00000542236 HMGXB3Q12766 1538 aa13.2□□□□□ -0.3
BBS12-203ENST00000542236 CCDC88BA6NC98 1476 aa13.2□□□□□ -0.3
BBS12-203ENST00000542236 GTF3C3Q9Y5Q9 886 aa13.17□□□□□ -0.3
BBS12-203ENST00000542236 EHMT2Q96KQ7 1210 aa13.16□□□□□ -0.3
BBS12-203ENST00000542236 ACIN1Q9UKV3 1341 aaKnown RBP13.15□□□□□ -0.3
BBS12-203ENST00000542236 NCAPD3P42695 1498 aa13.13□□□□□ -0.31
BBS12-203ENST00000542236 PABPN1Q86U42 306 aaKnown RBP eCLIP13.11□□□□□ -0.31
BBS12-203ENST00000542236 BAZ1BQ9UIG0 1483 aaKnown RBP13.1□□□□□ -0.31
BBS12-203ENST00000542236 ZEB1P37275 1124 aaPredicted RBP13.04□□□□□ -0.32
BBS12-203ENST00000542236 PRDM2Q13029 1718 aa13.01□□□□□ -0.33
BBS12-203ENST00000542236 FAM9AQ8IZU1 332 aaPredicted RBP13□□□□□ -0.33
BBS12-203ENST00000542236 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.98□□□□□ -0.33
BBS12-203ENST00000542236 MYT1Q01538 1121 aa12.98□□□□□ -0.33
BBS12-203ENST00000542236 TRIM41Q8WV44 630 aa12.95□□□□□ -0.34
BBS12-203ENST00000542236 EEA1Q15075 1411 aa12.93□□□□□ -0.34
BBS12-203ENST00000542236 YTHDC1Q96MU7 727 aaKnown RBP12.92□□□□□ -0.34
BBS12-203ENST00000542236 BIVM-ERCC5R4GMW8 1640 aa12.92□□□□□ -0.34
BBS12-203ENST00000542236 ABCC8Q09428 1581 aa12.91□□□□□ -0.34
BBS12-203ENST00000542236 DIEXFQ68CQ4 756 aaKnown RBP12.88□□□□□ -0.35
BBS12-203ENST00000542236 TOP2BQ02880 1626 aa12.88□□□□□ -0.35
BBS12-203ENST00000542236 CFTRP13569 1480 aa12.88□□□□□ -0.35
BBS12-203ENST00000542236 CC2D2AQ9P2K1 1620 aa12.87□□□□□ -0.35
BBS12-203ENST00000542236 WRNQ14191 1432 aaPredicted RBP eCLIP12.86□□□□□ -0.35
BBS12-203ENST00000542236 SYNJ1O43426 1573 aa12.85□□□□□ -0.35
BBS12-203ENST00000542236 CENPBP07199 599 aaPredicted RBP12.83□□□□□ -0.36
BBS12-203ENST00000542236 CCER1Q8TC90 406 aaPredicted RBP12.82□□□□□ -0.36
BBS12-203ENST00000542236 TTBK1Q5TCY1 1321 aaPredicted RBP12.82□□□□□ -0.36
BBS12-203ENST00000542236 KIF21BO75037 1637 aa12.78□□□□□ -0.36
BBS12-203ENST00000542236 CADPSQ9ULU8 1353 aa12.7□□□□□ -0.38
BBS12-203ENST00000542236 CUX1P39880 1505 aa12.7□□□□□ -0.38
BBS12-203ENST00000542236 SOGA1O94964 1423 aa12.69□□□□□ -0.38
BBS12-203ENST00000542236 LAMC3Q9Y6N6 1575 aa12.68□□□□□ -0.38
BBS12-203ENST00000542236 TNIKQ9UKE5 1360 aa12.67□□□□□ -0.38
BBS12-203ENST00000542236 ERICH3Q5RHP9 1530 aa12.66□□□□□ -0.38
BBS12-203ENST00000542236 CEP164Q9UPV0 1460 aa12.66□□□□□ -0.38
BBS12-203ENST00000542236 GOLGA3Q08378 1498 aa12.65□□□□□ -0.38
BBS12-203ENST00000542236 MIER1Q8N108 512 aa12.64□□□□□ -0.39
BBS12-203ENST00000542236 BCL11AQ9H165 835 aa12.63□□□□□ -0.39
BBS12-203ENST00000542236 RUSC2Q8N2Y8 1516 aa12.61□□□□□ -0.39
BBS12-203ENST00000542236 CSRNP3Q8WYN3 585 aa12.6□□□□□ -0.39
BBS12-203ENST00000542236 DNMBPQ6XZF7 1577 aa12.59□□□□□ -0.39
BBS12-203ENST00000542236 PRXQ9BXM0 1461 aa12.59□□□□□ -0.39
BBS12-203ENST00000542236 FANCD2Q9BXW9 1451 aa12.55□□□□□ -0.4
BBS12-203ENST00000542236 CEP162Q5TB80 1403 aa12.54□□□□□ -0.4
BBS12-203ENST00000542236 WDR97A6NE52 1622 aa12.54□□□□□ -0.4
BBS12-203ENST00000542236 KIF27Q86VH2 1401 aa12.52□□□□□ -0.4
BBS12-203ENST00000542236 ZNF316A6NFI3 1004 aaPredicted RBP12.52□□□□□ -0.4
BBS12-203ENST00000542236 ABCA10Q8WWZ4 1543 aa12.49□□□□□ -0.41
BBS12-203ENST00000542236 FGD5Q6ZNL6 1462 aa12.48□□□□□ -0.41
BBS12-203ENST00000542236 TOPBP1Q92547 1522 aa12.47□□□□□ -0.41
BBS12-203ENST00000542236 RAPGEF2Q9Y4G8 1499 aa12.47□□□□□ -0.41
BBS12-203ENST00000542236 CUL7Q14999 1698 aa12.45□□□□□ -0.42
BBS12-203ENST00000542236 TSHZ2Q9NRE2 1034 aa12.44□□□□□ -0.42
BBS12-203ENST00000542236 PDS5BQ9NTI5 1447 aa12.44□□□□□ -0.42
BBS12-203ENST00000542236 ANP32EQ9BTT0 268 aa12.44□□□□□ -0.42
BBS12-203ENST00000542236 SUPT16HQ9Y5B9 1047 aaKnown RBP12.43□□□□□ -0.42
BBS12-203ENST00000542236 KIF21AQ7Z4S6 1674 aa12.42□□□□□ -0.42
BBS12-203ENST00000542236 ABCA5Q8WWZ7 1642 aa12.42□□□□□ -0.42
BBS12-203ENST00000542236 POLA1P09884 1462 aaPredicted RBP12.41□□□□□ -0.42
BBS12-203ENST00000542236 URB2Q14146 1524 aaKnown RBP12.41□□□□□ -0.42
BBS12-203ENST00000542236 NESP48681 1621 aa12.4□□□□□ -0.42
BBS12-203ENST00000542236 IGF1RP08069 1367 aa12.38□□□□□ -0.43
BBS12-203ENST00000542236 VPS8Q8N3P4 1428 aa12.38□□□□□ -0.43
BBS12-203ENST00000542236 CLIP1P30622 1438 aa12.37□□□□□ -0.43
BBS12-203ENST00000542236 CUX2O14529 1486 aa12.37□□□□□ -0.43
BBS12-203ENST00000542236 TARBP1Q13395 1621 aaKnown RBP12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms