RNA–Protein interactions for RNA: ENST00000541225.5

ABCA8-204, Transcript of ATP binding cassette subfamily A member 8, humanhuman

TSL 2

Gene ABCA8, Length 3,657 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA8-204ENST00000541225 NISCHQ9Y2I1 1504 aa10.12□□□□□ -0.79
ABCA8-204ENST00000541225 CCDC180Q9P1Z9 1646 aa8.98□□□□□ -0.97
ABCA8-204ENST00000541225 DCAF1Q9Y4B6 1507 aa8.86□□□□□ -0.99
ABCA8-204ENST00000541225 ZCCHC6Q5VYS8 1495 aaKnown RBP8.83□□□□□ -1
ABCA8-204ENST00000541225 MYO15BQ96JP2 1530 aa8.81□□□□□ -1
ABCA8-204ENST00000541225 EIF4G1Q04637 1599 aaKnown RBP8.57□□□□□ -1.04
ABCA8-204ENST00000541225 HRCP23327 699 aa8.56□□□□□ -1.04
ABCA8-204ENST00000541225 AEBP2Q6ZN18 517 aaPredicted RBP8.49□□□□□ -1.05
ABCA8-204ENST00000541225 ABCC9O60706 1549 aa8.48□□□□□ -1.05
ABCA8-204ENST00000541225 PELP1Q8IZL8 1130 aaKnown RBP8.42□□□□□ -1.06
ABCA8-204ENST00000541225 RB1CC1Q8TDY2 1594 aa8.2□□□□□ -1.1
ABCA8-204ENST00000541225 MYT1Q01538 1121 aa8.17□□□□□ -1.1
ABCA8-204ENST00000541225 CHIC1Q5VXU3 224 aa8.15□□□□□ -1.1
ABCA8-204ENST00000541225 WRNQ14191 1432 aaPredicted RBP eCLIP8.15□□□□□ -1.1
ABCA8-204ENST00000541225 NACADO15069 1562 aa8.12□□□□□ -1.11
ABCA8-204ENST00000541225 BAZ1AQ9NRL2 1556 aaPredicted RBP8.06□□□□□ -1.12
ABCA8-204ENST00000541225 SCAF1Q9H7N4 1312 aaKnown RBP8.04□□□□□ -1.12
ABCA8-204ENST00000541225 PEG3Q9GZU2 1588 aa8□□□□□ -1.13
ABCA8-204ENST00000541225 TTBK1Q5TCY1 1321 aaPredicted RBP7.99□□□□□ -1.13
ABCA8-204ENST00000541225 CUX2O14529 1486 aa7.96□□□□□ -1.14
ABCA8-204ENST00000541225 RSF1Q96T23 1441 aaPredicted RBP7.95□□□□□ -1.14
ABCA8-204ENST00000541225 ZEB1P37275 1124 aaPredicted RBP7.94□□□□□ -1.14
ABCA8-204ENST00000541225 KIF21BO75037 1637 aa7.92□□□□□ -1.14
ABCA8-204ENST00000541225 TRIM26Q12899 539 aaPredicted RBP7.92□□□□□ -1.14
ABCA8-204ENST00000541225 UNC13AQ9UPW8 1703 aa7.87□□□□□ -1.15
ABCA8-204ENST00000541225 PPARGC1BQ86YN6 1023 aaKnown RBP7.84□□□□□ -1.15
ABCA8-204ENST00000541225 TOP2AP11388 1531 aaKnown RBP7.82□□□□□ -1.16
ABCA8-204ENST00000541225 TRIM41Q8WV44 630 aa7.82□□□□□ -1.16
ABCA8-204ENST00000541225 BIVM-ERCC5R4GMW8 1640 aa7.79□□□□□ -1.16
ABCA8-204ENST00000541225 PRDM2Q13029 1718 aa7.79□□□□□ -1.16
ABCA8-204ENST00000541225 SMARCA2P51531 1590 aa7.79□□□□□ -1.16
ABCA8-204ENST00000541225 ACIN1Q9UKV3 1341 aaKnown RBP7.79□□□□□ -1.16
ABCA8-204ENST00000541225 POLR1AO95602 1720 aaPredicted RBP7.77□□□□□ -1.17
ABCA8-204ENST00000541225 SYNJ1O43426 1573 aa7.77□□□□□ -1.17
ABCA8-204ENST00000541225 WIZO95785 1651 aa7.76□□□□□ -1.17
ABCA8-204ENST00000541225 CLSPNQ9HAW4 1339 aa7.75□□□□□ -1.17
ABCA8-204ENST00000541225 BAZ1BQ9UIG0 1483 aaKnown RBP7.73□□□□□ -1.17
ABCA8-204ENST00000541225 EEA1Q15075 1411 aa7.73□□□□□ -1.17
ABCA8-204ENST00000541225 MROH2BQ7Z745 1585 aa7.73□□□□□ -1.17
ABCA8-204ENST00000541225 SMARCA4P51532 1647 aa7.71□□□□□ -1.17
ABCA8-204ENST00000541225 MAP3K1Q13233 1512 aa7.71□□□□□ -1.18
ABCA8-204ENST00000541225 PCGF6Q9BYE7 350 aa7.68□□□□□ -1.18
ABCA8-204ENST00000541225 ERICH3Q5RHP9 1530 aa7.68□□□□□ -1.18
ABCA8-204ENST00000541225 ABCA5Q8WWZ7 1642 aa7.66□□□□□ -1.18
ABCA8-204ENST00000541225 TNIKQ9UKE5 1360 aa7.65□□□□□ -1.18
ABCA8-204ENST00000541225 CFAP43Q8NDM7 1665 aa7.65□□□□□ -1.18
ABCA8-204ENST00000541225 NEUROD1Q13562 356 aa7.64□□□□□ -1.19
ABCA8-204ENST00000541225 SLC24A1O60721 1099 aa7.63□□□□□ -1.19
ABCA8-204ENST00000541225 SHROOM4Q9ULL8 1493 aa7.63□□□□□ -1.19
ABCA8-204ENST00000541225 KDM5BQ9UGL1 1544 aa7.62□□□□□ -1.19
ABCA8-204ENST00000541225 TOP2BQ02880 1626 aa7.61□□□□□ -1.19
ABCA8-204ENST00000541225 NCAPD3P42695 1498 aa7.6□□□□□ -1.19
ABCA8-204ENST00000541225 RRBP1Q9P2E9 1410 aaKnown RBP7.59□□□□□ -1.19
ABCA8-204ENST00000541225 SCRIBQ14160 1630 aa7.58□□□□□ -1.2
ABCA8-204ENST00000541225 MAPKBP1O60336 1514 aa7.58□□□□□ -1.2
ABCA8-204ENST00000541225 ABCC8Q09428 1581 aa7.55□□□□□ -1.2
ABCA8-204ENST00000541225 GOLGA3Q08378 1498 aa7.54□□□□□ -1.2
ABCA8-204ENST00000541225 CECR2Q9BXF3 1484 aa7.54□□□□□ -1.2
ABCA8-204ENST00000541225 BICRAQ9NZM4 1560 aa7.53□□□□□ -1.2
ABCA8-204ENST00000541225 CEP162Q5TB80 1403 aa7.52□□□□□ -1.21
ABCA8-204ENST00000541225 CCDC88BA6NC98 1476 aa7.51□□□□□ -1.21
ABCA8-204ENST00000541225 KIF21AQ7Z4S6 1674 aa7.5□□□□□ -1.21
ABCA8-204ENST00000541225 PRXQ9BXM0 1461 aa7.49□□□□□ -1.21
ABCA8-204ENST00000541225 LRRIQ1Q96JM4 1722 aa7.49□□□□□ -1.21
ABCA8-204ENST00000541225 LOC105371045A0A1W2PR82 267 aa7.48□□□□□ -1.21
ABCA8-204ENST00000541225 APLP2Q06481 763 aa7.47□□□□□ -1.21
ABCA8-204ENST00000541225 WDR97A6NE52 1622 aa7.47□□□□□ -1.21
ABCA8-204ENST00000541225 ARAP1Q96P48 1450 aa7.46□□□□□ -1.21
ABCA8-204ENST00000541225 VPS8Q8N3P4 1428 aa7.46□□□□□ -1.22
ABCA8-204ENST00000541225 CEP164Q9UPV0 1460 aa7.46□□□□□ -1.22
ABCA8-204ENST00000541225 GCC2Q8IWJ2 1684 aa7.45□□□□□ -1.22
ABCA8-204ENST00000541225 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.44□□□□□ -1.22
ABCA8-204ENST00000541225 VIRMAQ69YN4 1812 aaKnown RBP7.44□□□□□ -1.22
ABCA8-204ENST00000541225 ARHGEF11O15085 1522 aa7.44□□□□□ -1.22
ABCA8-204ENST00000541225 E9PCH4 1651 aa7.44□□□□□ -1.22
ABCA8-204ENST00000541225 GTF3C3Q9Y5Q9 886 aa7.41□□□□□ -1.22
ABCA8-204ENST00000541225 CLIP1P30622 1438 aa7.41□□□□□ -1.22
ABCA8-204ENST00000541225 DHX57Q6P158 1386 aaKnown RBP7.41□□□□□ -1.22
ABCA8-204ENST00000541225 NCOA2Q15596 1464 aa7.4□□□□□ -1.22
ABCA8-204ENST00000541225 SUPT5HO00267 1087 aaKnown RBP7.4□□□□□ -1.22
ABCA8-204ENST00000541225 HECW1Q76N89 1606 aa7.4□□□□□ -1.22
ABCA8-204ENST00000541225 HMGXB3Q12766 1538 aa7.39□□□□□ -1.23
ABCA8-204ENST00000541225 ANP32EQ9BTT0 268 aa7.39□□□□□ -1.23
ABCA8-204ENST00000541225 THOC2Q8NI27 1593 aaKnown RBP7.38□□□□□ -1.23
ABCA8-204ENST00000541225 TIAM1Q13009 1591 aa7.38□□□□□ -1.23
ABCA8-204ENST00000541225 TSHZ2Q9NRE2 1034 aa7.37□□□□□ -1.23
ABCA8-204ENST00000541225 AQRO60306 1485 aaKnown RBP eCLIP7.36□□□□□ -1.23
ABCA8-204ENST00000541225 ZNF316A6NFI3 1004 aaPredicted RBP7.36□□□□□ -1.23
ABCA8-204ENST00000541225 RUSC2Q8N2Y8 1516 aa7.36□□□□□ -1.23
ABCA8-204ENST00000541225 DIEXFQ68CQ4 756 aaKnown RBP7.35□□□□□ -1.23
ABCA8-204ENST00000541225 SAMD9Q5K651 1589 aa7.35□□□□□ -1.23
ABCA8-204ENST00000541225 FAM9AQ8IZU1 332 aaPredicted RBP7.34□□□□□ -1.23
ABCA8-204ENST00000541225 ZMYM4Q5VZL5 1548 aa7.34□□□□□ -1.23
ABCA8-204ENST00000541225 SOGA1O94964 1423 aa7.34□□□□□ -1.23
ABCA8-204ENST00000541225 CTTNBP2Q8WZ74 1663 aa7.34□□□□□ -1.24
ABCA8-204ENST00000541225 SUPT16HQ9Y5B9 1047 aaKnown RBP7.33□□□□□ -1.24
ABCA8-204ENST00000541225 FANCIQ9NVI1 1328 aa7.32□□□□□ -1.24
ABCA8-204ENST00000541225 BCL11AQ9H165 835 aa7.32□□□□□ -1.24
ABCA8-204ENST00000541225 DENND4BO75064 1496 aaPredicted RBP7.32□□□□□ -1.24
ABCA8-204ENST00000541225 CENPBP07199 599 aaPredicted RBP7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms