RNA–Protein interactions for RNA: ENST00000538580.1

SLC6A12-212, Transcript of solute carrier family 6 member 12, humanhuman

TSL 4

Gene SLC6A12, Length 665 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12-212ENST00000538580 AEBP2Q6ZN18 517 aaPredicted RBP18.31■□□□□ 0.52
SLC6A12-212ENST00000538580 CHIC1Q5VXU3 224 aa17.6■□□□□ 0.41
SLC6A12-212ENST00000538580 NISCHQ9Y2I1 1504 aa15.89■□□□□ 0.13
SLC6A12-212ENST00000538580 SENP3Q9H4L4 574 aaPredicted RBP15.54■□□□□ 0.08
SLC6A12-212ENST00000538580 PHF23Q9BUL5 403 aaPredicted RBP15.48■□□□□ 0.07
SLC6A12-212ENST00000538580 FOXD1Q16676 465 aa14.48□□□□□ -0.09
SLC6A12-212ENST00000538580 CCDC180Q9P1Z9 1646 aa14.19□□□□□ -0.14
SLC6A12-212ENST00000538580 PLPPR3Q6T4P5 718 aa14.17□□□□□ -0.14
SLC6A12-212ENST00000538580 ABCC9O60706 1549 aa13.85□□□□□ -0.19
SLC6A12-212ENST00000538580 PPP6R1Q9UPN7 881 aa13.76□□□□□ -0.21
SLC6A12-212ENST00000538580 ADRA2BP18089 450 aa13.75□□□□□ -0.21
SLC6A12-212ENST00000538580 PIAS4Q8N2W9 510 aaPredicted RBP13.6□□□□□ -0.23
SLC6A12-212ENST00000538580 MSH5O43196 834 aa13.42□□□□□ -0.26
SLC6A12-212ENST00000538580 RB1CC1Q8TDY2 1594 aa13.41□□□□□ -0.26
SLC6A12-212ENST00000538580 NACADO15069 1562 aa13.39□□□□□ -0.27
SLC6A12-212ENST00000538580 MYO15BQ96JP2 1530 aa13.35□□□□□ -0.27
SLC6A12-212ENST00000538580 DCAF8L2P0C7V8 631 aa13.25□□□□□ -0.29
SLC6A12-212ENST00000538580 DCAF1Q9Y4B6 1507 aa13.23□□□□□ -0.29
SLC6A12-212ENST00000538580 ZCCHC6Q5VYS8 1495 aaKnown RBP13.21□□□□□ -0.3
SLC6A12-212ENST00000538580 SHROOM4Q9ULL8 1493 aa12.97□□□□□ -0.33
SLC6A12-212ENST00000538580 UNC13AQ9UPW8 1703 aa12.96□□□□□ -0.33
SLC6A12-212ENST00000538580 PABPN1Q86U42 306 aaKnown RBP eCLIP12.93□□□□□ -0.34
SLC6A12-212ENST00000538580 BICRAQ9NZM4 1560 aa12.91□□□□□ -0.34
SLC6A12-212ENST00000538580 SCRIBQ14160 1630 aa12.82□□□□□ -0.36
SLC6A12-212ENST00000538580 DNAJC5BQ9UF47 199 aa12.77□□□□□ -0.37
SLC6A12-212ENST00000538580 POTEDQ86YR6 584 aa12.7□□□□□ -0.38
SLC6A12-212ENST00000538580 EIF4G1Q04637 1599 aaKnown RBP12.61□□□□□ -0.39
SLC6A12-212ENST00000538580 MAPK8IP2Q13387 824 aaPredicted RBP12.56□□□□□ -0.4
SLC6A12-212ENST00000538580 CC2D2AQ9P2K1 1620 aa12.55□□□□□ -0.4
SLC6A12-212ENST00000538580 SCAF1Q9H7N4 1312 aaKnown RBP12.52□□□□□ -0.41
SLC6A12-212ENST00000538580 CECR2Q9BXF3 1484 aa12.52□□□□□ -0.41
SLC6A12-212ENST00000538580 PPP4R3CPQ6ZMV5 832 aa12.48□□□□□ -0.41
SLC6A12-212ENST00000538580 DMRT2Q9Y5R5 561 aa12.37□□□□□ -0.43
SLC6A12-212ENST00000538580 BAZ1AQ9NRL2 1556 aaPredicted RBP12.35□□□□□ -0.43
SLC6A12-212ENST00000538580 NCAPD3P42695 1498 aa12.35□□□□□ -0.43
SLC6A12-212ENST00000538580 SMARCA2P51531 1590 aa12.33□□□□□ -0.44
SLC6A12-212ENST00000538580 SMARCA4P51532 1647 aa12.32□□□□□ -0.44
SLC6A12-212ENST00000538580 ATAD2BQ9ULI0 1458 aa12.29□□□□□ -0.44
SLC6A12-212ENST00000538580 HMGXB3Q12766 1538 aa12.27□□□□□ -0.44
SLC6A12-212ENST00000538580 PEG3Q9GZU2 1588 aa12.26□□□□□ -0.45
SLC6A12-212ENST00000538580 BAZ1BQ9UIG0 1483 aaKnown RBP12.2□□□□□ -0.46
SLC6A12-212ENST00000538580 MROH2BQ7Z745 1585 aa12.18□□□□□ -0.46
SLC6A12-212ENST00000538580 CNKSR2Q8WXI2 1034 aa12.17□□□□□ -0.46
SLC6A12-212ENST00000538580 NCBP3Q53F19 620 aaKnown RBP12.06□□□□□ -0.48
SLC6A12-212ENST00000538580 RSF1Q96T23 1441 aaPredicted RBP12.05□□□□□ -0.48
SLC6A12-212ENST00000538580 LAMC3Q9Y6N6 1575 aa12.03□□□□□ -0.48
SLC6A12-212ENST00000538580 WIZO95785 1651 aa12.02□□□□□ -0.49
SLC6A12-212ENST00000538580 ERCC6Q03468 1493 aa12.02□□□□□ -0.49
SLC6A12-212ENST00000538580 HOXD11P31277 338 aaPredicted RBP12□□□□□ -0.49
SLC6A12-212ENST00000538580 CUX2O14529 1486 aa11.98□□□□□ -0.49
SLC6A12-212ENST00000538580 PDS5BQ9NTI5 1447 aa11.98□□□□□ -0.49
SLC6A12-212ENST00000538580 CADPSQ9ULU8 1353 aa11.98□□□□□ -0.49
SLC6A12-212ENST00000538580 RNF216Q9NWF9 866 aaPredicted RBP11.98□□□□□ -0.49
SLC6A12-212ENST00000538580 TOP2AP11388 1531 aaKnown RBP11.96□□□□□ -0.49
SLC6A12-212ENST00000538580 NESP48681 1621 aa11.94□□□□□ -0.5
SLC6A12-212ENST00000538580 KCNA4P22459 653 aa11.92□□□□□ -0.5
SLC6A12-212ENST00000538580 DCAF8L1A6NGE4 600 aa11.91□□□□□ -0.5
SLC6A12-212ENST00000538580 NPM3O75607 178 aaKnown RBP11.9□□□□□ -0.5
SLC6A12-212ENST00000538580 CFTRP13569 1480 aa11.88□□□□□ -0.51
SLC6A12-212ENST00000538580 THOC2Q8NI27 1593 aaKnown RBP11.82□□□□□ -0.52
SLC6A12-212ENST00000538580 MRC2Q9UBG0 1479 aa11.81□□□□□ -0.52
SLC6A12-212ENST00000538580 CEP164Q9UPV0 1460 aa11.81□□□□□ -0.52
SLC6A12-212ENST00000538580 KIF21AQ7Z4S6 1674 aa11.81□□□□□ -0.52
SLC6A12-212ENST00000538580 CCDC88BA6NC98 1476 aa11.8□□□□□ -0.52
SLC6A12-212ENST00000538580 FANCD2Q9BXW9 1451 aa11.8□□□□□ -0.52
SLC6A12-212ENST00000538580 WDR62O43379 1518 aa11.76□□□□□ -0.53
SLC6A12-212ENST00000538580 PRDM2Q13029 1718 aa11.74□□□□□ -0.53
SLC6A12-212ENST00000538580 ABCC8Q09428 1581 aa11.71□□□□□ -0.54
SLC6A12-212ENST00000538580 DNAJC5Q9H3Z4 198 aa11.69□□□□□ -0.54
SLC6A12-212ENST00000538580 URB2Q14146 1524 aaKnown RBP11.65□□□□□ -0.55
SLC6A12-212ENST00000538580 SUPT5HO00267 1087 aaKnown RBP11.63□□□□□ -0.55
SLC6A12-212ENST00000538580 IFT140Q96RY7 1462 aa11.59□□□□□ -0.55
SLC6A12-212ENST00000538580 TOPBP1Q92547 1522 aa11.59□□□□□ -0.55
SLC6A12-212ENST00000538580 DNMBPQ6XZF7 1577 aa11.58□□□□□ -0.55
SLC6A12-212ENST00000538580 RNF39Q9H2S5 420 aa11.49□□□□□ -0.57
SLC6A12-212ENST00000538580 POLA1P09884 1462 aaPredicted RBP11.49□□□□□ -0.57
SLC6A12-212ENST00000538580 WDR97A6NE52 1622 aa11.49□□□□□ -0.57
SLC6A12-212ENST00000538580 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.48□□□□□ -0.57
SLC6A12-212ENST00000538580 OSCARQ8IYS5 282 aa11.47□□□□□ -0.57
SLC6A12-212ENST00000538580 SOGA1O94964 1423 aa11.46□□□□□ -0.57
SLC6A12-212ENST00000538580 TARBP1Q13395 1621 aaKnown RBP11.46□□□□□ -0.58
SLC6A12-212ENST00000538580 CUX1P39880 1505 aa11.44□□□□□ -0.58
SLC6A12-212ENST00000538580 ZNF608Q9ULD9 1512 aaPredicted RBP11.44□□□□□ -0.58
SLC6A12-212ENST00000538580 FGD5Q6ZNL6 1462 aa11.43□□□□□ -0.58
SLC6A12-212ENST00000538580 CACNB1Q02641 598 aaPredicted RBP11.41□□□□□ -0.58
SLC6A12-212ENST00000538580 EIF4G3O43432 1585 aaKnown RBP11.41□□□□□ -0.58
SLC6A12-212ENST00000538580 WRNQ14191 1432 aaPredicted RBP eCLIP11.39□□□□□ -0.59
SLC6A12-212ENST00000538580 AQRO60306 1485 aaKnown RBP eCLIP11.38□□□□□ -0.59
SLC6A12-212ENST00000538580 RAD54L2Q9Y4B4 1467 aa11.38□□□□□ -0.59
SLC6A12-212ENST00000538580 TOP2BQ02880 1626 aa11.37□□□□□ -0.59
SLC6A12-212ENST00000538580 ABCA10Q8WWZ4 1543 aa11.36□□□□□ -0.59
SLC6A12-212ENST00000538580 TDRD9Q8NDG6 1382 aaKnown RBP11.36□□□□□ -0.59
SLC6A12-212ENST00000538580 GRIN2BQ13224 1484 aa11.36□□□□□ -0.59
SLC6A12-212ENST00000538580 BIVM-ERCC5R4GMW8 1640 aa11.35□□□□□ -0.59
SLC6A12-212ENST00000538580 MAGI1Q96QZ7 1491 aaPredicted RBP11.35□□□□□ -0.59
SLC6A12-212ENST00000538580 GAPVD1Q14C86 1478 aa11.32□□□□□ -0.6
SLC6A12-212ENST00000538580 C1QBPQ07021 282 aaKnown RBP11.32□□□□□ -0.6
SLC6A12-212ENST00000538580 SLC4A2P04920 1241 aa11.3□□□□□ -0.6
SLC6A12-212ENST00000538580 CHMP7Q8WUX9 453 aaPredicted RBP11.3□□□□□ -0.6
SLC6A12-212ENST00000538580 SLC4A1APQ9BWU0 796 aaKnown RBP11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms