RNA–Protein interactions for RNA: ENST00000536911.1

SOX5-209, Transcript of SRY-box 5, humanhuman

TSL 3

Gene SOX5, Length 855 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX5-209ENST00000536911 AEBP2Q6ZN18 517 aaPredicted RBP27.93■■■□□ 2.06
SOX5-209ENST00000536911 CHIC1Q5VXU3 224 aa26.24■■□□□ 1.79
SOX5-209ENST00000536911 SENP3Q9H4L4 574 aaPredicted RBP23.72■■□□□ 1.39
SOX5-209ENST00000536911 PHF23Q9BUL5 403 aaPredicted RBP23.5■■□□□ 1.35
SOX5-209ENST00000536911 FOXD1Q16676 465 aa22.25■■□□□ 1.15
SOX5-209ENST00000536911 NISCHQ9Y2I1 1504 aa21.58■■□□□ 1.04
SOX5-209ENST00000536911 PLPPR3Q6T4P5 718 aa20.82■□□□□ 0.92
SOX5-209ENST00000536911 MSH5O43196 834 aa20.78■□□□□ 0.92
SOX5-209ENST00000536911 POTEDQ86YR6 584 aa20.75■□□□□ 0.91
SOX5-209ENST00000536911 PPP6R1Q9UPN7 881 aa20.71■□□□□ 0.91
SOX5-209ENST00000536911 PIAS4Q8N2W9 510 aaPredicted RBP20.67■□□□□ 0.9
SOX5-209ENST00000536911 ADRA2BP18089 450 aa20.61■□□□□ 0.89
SOX5-209ENST00000536911 CCDC180Q9P1Z9 1646 aa19.14■□□□□ 0.66
SOX5-209ENST00000536911 MAPK8IP2Q13387 824 aaPredicted RBP19.04■□□□□ 0.64
SOX5-209ENST00000536911 DMRT2Q9Y5R5 561 aa18.81■□□□□ 0.6
SOX5-209ENST00000536911 SCAF1Q9H7N4 1312 aaKnown RBP18.72■□□□□ 0.59
SOX5-209ENST00000536911 PPP4R3CPQ6ZMV5 832 aa18.29■□□□□ 0.52
SOX5-209ENST00000536911 ABCC9O60706 1549 aa18.25■□□□□ 0.51
SOX5-209ENST00000536911 DCAF8L1A6NGE4 600 aa18.08■□□□□ 0.48
SOX5-209ENST00000536911 ZCCHC6Q5VYS8 1495 aaKnown RBP18.07■□□□□ 0.48
SOX5-209ENST00000536911 HOXD11P31277 338 aaPredicted RBP18.04■□□□□ 0.48
SOX5-209ENST00000536911 CACNB1Q02641 598 aaPredicted RBP18.04■□□□□ 0.48
SOX5-209ENST00000536911 CNKSR2Q8WXI2 1034 aa17.95■□□□□ 0.46
SOX5-209ENST00000536911 DCAF1Q9Y4B6 1507 aa17.93■□□□□ 0.46
SOX5-209ENST00000536911 NACADO15069 1562 aa17.88■□□□□ 0.45
SOX5-209ENST00000536911 MYO15BQ96JP2 1530 aa17.88■□□□□ 0.45
SOX5-209ENST00000536911 DCAF8L2P0C7V8 631 aa17.86■□□□□ 0.45
SOX5-209ENST00000536911 RB1CC1Q8TDY2 1594 aa17.83■□□□□ 0.45
SOX5-209ENST00000536911 RNF216Q9NWF9 866 aaPredicted RBP17.83■□□□□ 0.44
SOX5-209ENST00000536911 RNF39Q9H2S5 420 aa17.77■□□□□ 0.44
SOX5-209ENST00000536911 C1QBPQ07021 282 aaKnown RBP17.47■□□□□ 0.39
SOX5-209ENST00000536911 NCBP3Q53F19 620 aaKnown RBP17.44■□□□□ 0.38
SOX5-209ENST00000536911 SCRIBQ14160 1630 aa17.43■□□□□ 0.38
SOX5-209ENST00000536911 DNAJC5BQ9UF47 199 aa17.4■□□□□ 0.38
SOX5-209ENST00000536911 UNC13AQ9UPW8 1703 aa17.34■□□□□ 0.37
SOX5-209ENST00000536911 NPM3O75607 178 aaKnown RBP17.26■□□□□ 0.35
SOX5-209ENST00000536911 SHROOM4Q9ULL8 1493 aa17.22■□□□□ 0.35
SOX5-209ENST00000536911 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.2■□□□□ 0.348e-7■■■□□ 15.7
SOX5-209ENST00000536911 BICRAQ9NZM4 1560 aa17.12■□□□□ 0.33
SOX5-209ENST00000536911 PABPN1Q86U42 306 aaKnown RBP eCLIP17.04■□□□□ 0.32
SOX5-209ENST00000536911 U3KPZ7 1027 aaPredicted RBP16.82■□□□□ 0.28
SOX5-209ENST00000536911 BAZ1AQ9NRL2 1556 aaPredicted RBP16.78■□□□□ 0.28
SOX5-209ENST00000536911 KCNA4P22459 653 aa16.77■□□□□ 0.28
SOX5-209ENST00000536911 EIF4G1Q04637 1599 aaKnown RBP16.72■□□□□ 0.27
SOX5-209ENST00000536911 SMARCA4P51532 1647 aa16.7■□□□□ 0.26
SOX5-209ENST00000536911 SPINK5Q9NQ38 1064 aaPredicted RBP16.69■□□□□ 0.26
SOX5-209ENST00000536911 CECR2Q9BXF3 1484 aa16.67■□□□□ 0.26
SOX5-209ENST00000536911 CAPN15O75808 1086 aa16.62■□□□□ 0.25
SOX5-209ENST00000536911 DSG3P32926 999 aa16.6■□□□□ 0.25
SOX5-209ENST00000536911 MROH2BQ7Z745 1585 aa16.59■□□□□ 0.25
SOX5-209ENST00000536911 SLC4A2P04920 1241 aa16.58■□□□□ 0.24
SOX5-209ENST00000536911 SMARCA2P51531 1590 aa16.57■□□□□ 0.24
SOX5-209ENST00000536911 CC2D2AQ9P2K1 1620 aa16.56■□□□□ 0.24
SOX5-209ENST00000536911 RSF1Q96T23 1441 aaPredicted RBP16.53■□□□□ 0.24
SOX5-209ENST00000536911 PEG3Q9GZU2 1588 aa16.52■□□□□ 0.24
SOX5-209ENST00000536911 ATAD2BQ9ULI0 1458 aa16.47■□□□□ 0.23
SOX5-209ENST00000536911 WIZO95785 1651 aa16.46■□□□□ 0.23
SOX5-209ENST00000536911 HMGXB3Q12766 1538 aa16.45■□□□□ 0.22
SOX5-209ENST00000536911 BAZ1BQ9UIG0 1483 aaKnown RBP16.43■□□□□ 0.22
SOX5-209ENST00000536911 NCAPD3P42695 1498 aa16.41■□□□□ 0.22
SOX5-209ENST00000536911 SUPT5HO00267 1087 aaKnown RBP16.39■□□□□ 0.21
SOX5-209ENST00000536911 TOP2AP11388 1531 aaKnown RBP16.37■□□□□ 0.21
SOX5-209ENST00000536911 TRHP20396 242 aaPredicted RBP16.33■□□□□ 0.2
SOX5-209ENST00000536911 ABCB7O75027 752 aa16.25■□□□□ 0.19
SOX5-209ENST00000536911 POTEHQ6S545 545 aa16.2■□□□□ 0.18
SOX5-209ENST00000536911 APLP2Q06481 763 aa16.18■□□□□ 0.18
SOX5-209ENST00000536911 ZNF219Q9P2Y4 722 aaPredicted RBP16.18■□□□□ 0.18
SOX5-209ENST00000536911 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.16■□□□□ 0.18
SOX5-209ENST00000536911 HNRNPUL2Q1KMD3 747 aaKnown RBP16.16■□□□□ 0.18
SOX5-209ENST00000536911 CCDC88BA6NC98 1476 aa16.09■□□□□ 0.17
SOX5-209ENST00000536911 SAMD1Q6SPF0 538 aaPredicted RBP16.08■□□□□ 0.16
SOX5-209ENST00000536911 LAMC3Q9Y6N6 1575 aa16.01■□□□□ 0.15
SOX5-209ENST00000536911 PRDM2Q13029 1718 aa15.99■□□□□ 0.15
SOX5-209ENST00000536911 CADPSQ9ULU8 1353 aa15.96■□□□□ 0.15
SOX5-209ENST00000536911 CFTRP13569 1480 aa15.94■□□□□ 0.14
SOX5-209ENST00000536911 MYCNP04198 464 aaPredicted RBP15.89■□□□□ 0.13
SOX5-209ENST00000536911 PDS5BQ9NTI5 1447 aa15.88■□□□□ 0.13
SOX5-209ENST00000536911 POLA2Q14181 598 aa15.86■□□□□ 0.13
SOX5-209ENST00000536911 NESP48681 1621 aa15.85■□□□□ 0.13
SOX5-209ENST00000536911 ERCC6Q03468 1493 aa15.82■□□□□ 0.12
SOX5-209ENST00000536911 FANCD2Q9BXW9 1451 aa15.81■□□□□ 0.12
SOX5-209ENST00000536911 CEP164Q9UPV0 1460 aa15.8■□□□□ 0.12
SOX5-209ENST00000536911 KIF21AQ7Z4S6 1674 aa15.76■□□□□ 0.11
SOX5-209ENST00000536911 SLC4A1APQ9BWU0 796 aaKnown RBP15.73■□□□□ 0.11
SOX5-209ENST00000536911 RBM42Q9BTD8 480 aaKnown RBP15.72■□□□□ 0.11
SOX5-209ENST00000536911 ATF5Q9Y2D1 282 aaPredicted RBP15.69■□□□□ 0.1
SOX5-209ENST00000536911 ABCC8Q09428 1581 aa15.69■□□□□ 0.1
SOX5-209ENST00000536911 MRC2Q9UBG0 1479 aa15.68■□□□□ 0.1
SOX5-209ENST00000536911 WRNQ14191 1432 aaPredicted RBP eCLIP15.65■□□□□ 0.1
SOX5-209ENST00000536911 DNMBPQ6XZF7 1577 aa15.64■□□□□ 0.09
SOX5-209ENST00000536911 FOXD4L1Q9NU39 408 aa15.63■□□□□ 0.09
SOX5-209ENST00000536911 THOC2Q8NI27 1593 aaKnown RBP15.62■□□□□ 0.09
SOX5-209ENST00000536911 WDR62O43379 1518 aa15.6■□□□□ 0.09
SOX5-209ENST00000536911 BIVM-ERCC5R4GMW8 1640 aa15.6■□□□□ 0.09
SOX5-209ENST00000536911 TOP2BQ02880 1626 aa15.59■□□□□ 0.09
SOX5-209ENST00000536911 TOPBP1Q92547 1522 aa15.58■□□□□ 0.08
SOX5-209ENST00000536911 CUX1P39880 1505 aa15.57■□□□□ 0.08
SOX5-209ENST00000536911 URB2Q14146 1524 aaKnown RBP15.57■□□□□ 0.08
SOX5-209ENST00000536911 SYNJ1O43426 1573 aa15.56■□□□□ 0.08
SOX5-209ENST00000536911 CHRDL2Q6WN34 429 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms